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{{f5samples
{{f5samples
|id=FF:10816-111B6
|DRA_sample_Accession=CAGE@SAMD00005737
|name=epitheloid carcinoma cell line: HelaS3 ENCODE, biol_rep2
|accession_numbers=CAGE;DRX007883;DRR008755;DRZ000180;DRZ001565;DRZ011530;DRZ012915
|sample_id=10816
|ancestors_in_anatomy_facet=
|rna_tube_id=111B6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000255
|rna_box=111
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305
|rna_position=B6
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0011472
|sample_cell_lot=
|comment=
|sample_cell_catalog=
|created_by=
|sample_company=
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=
|def=
|sample_strain=
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2;;chr6:135502408..135502459,+!p2@MYB!0.23!0.95!MYB;;chr2:46524865..46524870,+!p9@EPAS1!0.23!0.95!EPAS1;;chr12:72056749..72056767,+!p6@THAP2!0.23!0.88!THAP2;;chr16:67596417..67596497,+!p1@CTCF!0.22!51.75!CTCF;;chr15:57210818..57210930,+!p1@TCF12!0.22!26.60!TCF12;;chr19:9695169..9695188,-!p1@ZNF121!0.22!25.73!ZNF121;;chr10:111967345..111967422,+!p1@MXI1!0.22!24.19!MXI1;;chr10:124768300..124768334,-!p1@IKZF5!0.22!17.83!IKZF5;;chr19:53400852..53400962,-!p1@ZNF320!0.22!14.40!ZNF320;;chr17:33288552..33288598,+!p1@ZNF830!0.22!10.82!ZNF830;;chr2:174830084..174830108,-!p4@SP3!0.22!5.12!SP3;;chrX:129244840..129244881,-!p2@ELF4!0.22!5.04!ELF4;;chr20:44600496..44600541,-!p2@ZNF335!0.22!3.14!ZNF335;;chr14:69262789..69262822,-!p2@ZFP36L1!0.22!3.14!ZFP36L1;;chr14:35872962..35873025,-!p3@NFKBIA!0.22!3.00!NFKBIA;;chr6:20403727..20403769,+!p4@E2F3!0.22!2.85!E2F3;;chr11:58346585..58346607,+!p2@ZFP91!0.22!2.78!ZFP91;;chr1:35656397..35656455,-!p3@SFPQ!0.22!2.70!SFPQ;;chr1:235383681..235383700,-!p2@ARID4B!0.22!1.75!ARID4B;;chr15:31619570..31619615,+!p6@KLF13!0.22!1.75!KLF13;;chr16:68119440..68119480,+!p4@NFATC3!0.22!1.68!NFATC3;;chr9:14082760..14082775,-!p6@NFIB!0.22!1.68!NFIB;;chr19:12551785..12551823,-!p1@ZNF443!0.22!1.61!ZNF443;;chr12:6798692..6798723,-!p5@ZNF384!0.22!1.61!ZNF384;;chr1:247095162..247095173,-!p3@AHCTF1!0.22!1.46!AHCTF1;;chr4:57774884..57774924,+!p4@REST!0.22!1.46!REST;;chr12:10865870..10865888,-!p6@CSDA!0.22!1.24!CSDA;;chr15:71184837..71184877,-!p2@THAP10!0.22!1.24!THAP10;;chr3:170075103..170075114,+!p5@SKIL!0.22!1.17!SKIL;;chr14:89029323..89029329,+!p4@ZC3H14!0.22!1.10!ZC3H14;;chr19:10291229..10291247,-!p5@DNMT1!0.22!1.02!DNMT1;;chr3:114343195..114343206,-!p11@ZBTB20!0.22!1.02!ZBTB20;;chr13:37393324..37393335,+!p2@RFXAP!0.22!0.88!RFXAP;;chr11:12696579..12696611,+!p4@TEAD1!0.22!0.66!TEAD1;;chr12:2968536..2968539,-!p3@FOXM1!0.22!0.66!FOXM1;;chr17:46682368..46682373,-!p12@HOXB6!0.22!0.66!HOXB6;;chr5:92918789..92918800,+!p12@NR2F1!0.22!0.66!NR2F1;;chr5:92919312..92919334,+!p13@NR2F1!0.22!0.66!NR2F1;;chr6:10412338..10412345,-!p17@TFAP2A!0.22!0.66!TFAP2A;;chr9:14083091..14083096,-!p12@NFIB!0.22!0.66!NFIB;;chr9:126774058..126774081,+!p3@LHX2!0.22!0.66!LHX2;;chr2:176987415..176987425,+!p4@HOXD9!0.22!0.66!HOXD9;;chr2:42721205..42721307,+!p4@MTA3!0.22!0.66!MTA3;;chr1:180199393..180199426,+!p1@LHX4!0.22!0.66!LHX4;;chr1:23886329..23886336,-!p3@ID3!0.22!0.66!ID3;;chr1:61542891..61542920,+!p12@NFIA!0.22!0.66!NFIA;;chr9:86595503..86595550,-!p2@HNRNPK!0.21!233.52!HNRPK;;chr17:56065540..56065627,-!p1@VEZF1!0.21!45.10!VEZF1;;chr17:45973586..45973618,+!p1@SP2!0.21!22.22!SP2;;chr10:104155455..104155479,+!p1@NFKB2!0.21!20.90!NFKB2;;chr17:47492236..47492251,-!p1@PHB!0.21!20.03!PHB;;chr12:104531945..104531996,-!p1@NFYB!0.21!19.81!NFYB;;chr5:138629389..138629416,+!p4@MATR3!0.21!17.69!MATR3;;chr12:53614115..53614154,-!p1@RARG!0.21!7.16!RARG;;chr16:67063211..67063240,+!p2@CBFB!0.21!6.29!CBFB;;chr7:5085480..5085510,+!p1@RBAK!0.21!5.99!RBAK;;chr15:77713025..77713081,+!p2@HMG20A!0.21!5.70!HMG20A;;chr11:62369352..62369373,-!p5@MTA2!0.21!4.90!MTA2;;chr10:105110890..105110914,-!p2@PCGF6!0.21!4.60!PCGF6;;chr4:47916543..47916580,-!p2@NFXL1!0.21!4.09!NFXL1;;chr4:38665866..38665878,+!p4@KLF3!0.21!3.95!KLF3;;chr17:38256877..38256900,-!p2@NR1D1!0.21!3.95!NR1D1;;chr20:47894936..47895010,-!p2@ZNFX1!0.21!3.95!ZNFX1;;chr16:29817231..29817290,+!p10@MAZ!0.21!3.58!MAZ;;chr16:3185125..3185173,+!p1@ZNF213!0.21!2.92!ZNF213;;chr18:47808120..47808171,-!p2@MBD1!0.21!2.92!MBD1;;chr6:106534230..106534254,+!p2@PRDM1!0.21!2.92!PRDM1;;chr16:67596384..67596411,+!p3@CTCF!0.21!2.85!CTCF;;chr17:35767301..35767344,+!p2@TADA2A!0.21!2.78!TADA2A;;chr7:1570388..1570418,+!p2@MAFK!0.21!2.41!MAFK;;chr12:53773927..53773943,+!p3@SP1!0.21!2.19!SP1;;chr14:103059006..103059017,+!p2@RCOR1!0.21!1.46!RCOR1;;chr3:33481687..33481713,-!p4@UBP1!0.21!1.46!UBP1;;chr19:11616645..11616663,-!p1@ZNF653!0.21!1.39!ZNF653;;chr16:54964740..54964789,+!p1@IRX5!0.21!1.32!IRX5;;chr15:77713095..77713113,+!p5@HMG20A!0.21!0.95!HMG20A;;chrX:53254373..53254406,-!p1@KDM5C!0.20!51.97!KDM5C;;chr14:105886150..105886224,+!p1@MTA1!0.20!48.82!MTA1;;chr18:3450161..3450183,+!p1@TGIF1!0.20!48.17!TGIF1;;chr10:135122380..135122458,+!p1@ZNF511!0.20!43.56!ZNF511;;chr6:34204921..34204939,+!p3@HMGA1!0.20!42.61!HMGA1;;chr5:176449684..176449722,+!p1@ZNF346!0.20!26.75!ZNF346;;chr1:155826967..155827018,-!p1@GON4L!0.20!24.63!GON4L;;chr6:34204973..34204990,+!p4@HMGA1!0.20!18.35!HMGA1;;chr2:85198369..85198483,+!p2@KCMF1!0.20!16.30!KCMF1;;chr15:96873892..96873919,+!p4@NR2F2!0.20!13.30!NR2F2;;chr15:96874012..96874042,+!p2@NR2F2!0.20!12.13!NR2F2;;chr16:30546141..30546240,-!p1@ZNF747,p2@ZNF768!0.20!5.04!ZNF747;;chr19:37569314..37569381,+!p1@ZNF420!0.20!4.39!ZNF420;;chr14:74353576..74353589,+!p3@ZNF410!0.20!4.09!ZNF410;;chr17:4890695..4890773,-!p2@CAMTA2!0.20!3.73!CAMTA2;;chr1:161736140..161736151,+!p3@ATF6!0.20!3.73!ATF6;;chr1:249132556..249132573,+!p3@ZNF672!0.20!3.36!ZNF672;;chr19:56092252..56092287,-!p2@ZNF579!0.20!3.22!ZNF579;;chr20:306051..306096,+!p3@SOX12!0.20!3.00!SOX12;;chr12:53625966..53626012,-!p2@RARG!0.20!3.00!RARG;;chr9:37465273..37465338,-!p2@ZBTB5!0.20!2.92!ZBTB5;;chr11:62369383..62369399,-!p6@MTA2!0.20!2.41!MTA2;;chr15:90895471..90895543,+!p1@ZNF774!0.20!2.41!ZNF774;;chr19:56652621..56652641,+!p2@ZNF444!0.20!2.19!ZNF444;;chr12:53614155..53614187,-!p3@RARG!0.20!1.97!RARG;;chr18:3448455..3448480,+!p5@TGIF1!0.20!1.83!TGIF1;;chr7:74072193..74072218,+!p4@GTF2I!0.20!1.61!GTF2I;;chr9:94186085..94186096,-!p3@NFIL3!0.20!1.53!NFIL3;;chr14:64970451..64970473,-!p6@ZBTB25!0.20!1.53!ZBTB25;;chr18:3449586..3449617,+!p8@TGIF1!0.20!1.46!TGIF1;;chr11:16759983..16760029,-!p2@SOX6!0.20!1.39!SOX6;;chr19:50435736..50435781,+!p3@ATF5!0.20!1.17!ATF5;;chr1:247095286..247095297,-!p4@AHCTF1!0.20!1.17!AHCTF1;;chr15:56535922..56535936,-!p5@RFX7!0.20!1.10!RFX7;;chr3:168865194..168865245,-!p3@MECOM!0.20!1.02!MECOM;;chr2:66662895..66662907,+!p3@MEIS1!0.20!0.95!MEIS1;;chr16:4323323..4323333,-!p4@TFAP4!0.20!0.95!TFAP4;;chr12:80083544..80083558,-!p13@PAWR!0.20!0.95!PAWR;;chr9:127533519..127533573,-!p2@NR6A1!0.20!0.88!NR6A1;;chr3:37217544..37217586,-!p6@LRRFIP2!0.20!0.80!LRRFIP2;;chr1:47903709..47903764,+!p1@BC169308!0.20!0.80!FOXD2;;chr21:38071488..38071502,+!p4@SIM2!0.20!0.58!SIM2;;chr2:10091783..10091811,+!p2@GRHL1!0.20!0.58!GRHL1;;chr2:237077022..237077038,-!p1@GBX2!0.20!0.58!GBX2;;chr3:69812701..69812729,+!p9@MITF!0.20!0.58!MITF;;chr5:142780280..142780294,-!p16@NR3C1!0.20!0.58!NR3C1;;chr6:1312688..1312701,+!p3@FOXQ1!0.20!0.58!FOXQ1;;chr6:20402608..20402629,+!p13@E2F3!0.20!0.58!E2F3;;chr6:27440529..27440553,-!p5@ZNF184!0.20!0.58!ZNF184;;chr7:101460882..101460923,+!p5@CUX1!0.20!0.58!CUX1;;chr7:64363682..64363692,+!p4@ZNF273!0.20!0.58!ZNF273;;chr8:128747846..128747860,+!p15@MYC!0.20!0.58!MYC;;chr12:56583362..56583369,-!p7@SMARCC2!0.20!0.58!SMARCC2;;chr12:80084120..80084136,-!p15@PAWR!0.20!0.58!PAWR;;chr13:100634111..100634118,+!p8@ZIC2!0.20!0.58!ZIC2;;chr14:21567009..21567025,-!p9@ZNF219!0.20!0.58!ZNF219;;chr15:67418177..67418204,+!p9@SMAD3!0.20!0.58!SMAD3;;chr17:41622731..41622764,-!p5@ETV4!0.20!0.58!ETV4;;chr17:41622982..41623001,-!p11@ETV4!0.20!0.58!ETV4;;chr12:10875831..10876025,-!p1@CSDA!0.19!116.14!CSDA;;chr21:34144024..34144111,-!p1@GCFC1!0.19!28.58!GCFC1;;chr16:29817665..29817719,+!p3@MAZ!0.19!20.90!MAZ;;chr11:130184753..130184824,-!p1@ZBTB44!0.19!18.49!ZBTB44;;chr16:67226019..67226127,+!p1@E2F4!0.19!17.91!E2F4;;chr15:41952591..41952672,+!p1@MGA!0.19!17.83!MGA;;chr17:40428359..40428462,-!p1@STAT5B!0.19!17.18!STAT5B;;chr8:145159357..145159373,+!p3@MAF1!0.19!17.18!MAF1;;chr9:2015335..2015370,+!p1@SMARCA2!0.19!16.66!SMARCA2;;chr1:200379129..200379174,-!p1@ZNF281!0.19!16.45!ZNF281;;chr17:35766967..35767022,+!p1@TADA2A!0.19!14.91!TADA2A;;chr7:17338266..17338282,+!p1@AHR!0.19!14.40!AHR;;chr19:45908292..45908374,-!p1@PPP1R13L!0.19!11.84!PPP1R13L;;chr9:32552577..32552627,-!p1@TOPORS!0.19!6.50!TOPORS;;chr19:15543565..15543579,-!p2@WIZ!0.19!5.48!WIZ;;chr19:33793430..33793447,-!p1@CEBPA!0.19!5.19!CEBPA;;chr19:2900917..2900981,+!p1@ZNF57!0.19!4.60!ZNF57;;chr18:72922743..72922761,+!p3@TSHZ1!0.19!3.87!TSHZ1;;chr19:58838369..58838439,+!p1@ZSCAN22!0.19!3.80!ZSCAN22;;chr1:42800848..42800859,-!p2@FOXJ3!0.19!3.14!FOXJ3;;chr18:51750928..51750942,-!p4@MBD2!0.19!2.70!MBD2;;chrX:129244885..129244926,-!p3@ELF4!0.19!2.63!ELF4;;chr12:72058060..72058101,+!p5@THAP2!0.19!2.63!THAP2;;
|sample_dev_stage=
|sample_tissue=cervix
|sample_donor(cell lot)=
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Line 67: Line 39:
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|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.03673709679697e-280!GO:0043226;organelle;6.77332190835732e-236!GO:0043229;intracellular organelle;2.76515301083319e-235!GO:0043227;membrane-bound organelle;1.57371237050464e-234!GO:0043231;intracellular membrane-bound organelle;1.57371237050464e-234!GO:0005737;cytoplasm;1.05477876123855e-175!GO:0044422;organelle part;3.51229481110751e-173!GO:0044446;intracellular organelle part;2.83270648081908e-171!GO:0044444;cytoplasmic part;3.46362060937017e-121!GO:0005634;nucleus;6.52889663397844e-119!GO:0032991;macromolecular complex;4.05348280859167e-117!GO:0044237;cellular metabolic process;1.07326401415615e-114!GO:0044238;primary metabolic process;1.09617527836564e-109!GO:0043170;macromolecule metabolic process;1.29389701525533e-100!GO:0044428;nuclear part;2.17115400936497e-99!GO:0030529;ribonucleoprotein complex;1.34140133968579e-97!GO:0043233;organelle lumen;1.49812288086562e-91!GO:0031974;membrane-enclosed lumen;1.49812288086562e-91!GO:0003723;RNA binding;7.85455163791089e-87!GO:0005739;mitochondrion;9.25273546902974e-81!GO:0005515;protein binding;2.21176715412901e-71!GO:0006396;RNA processing;2.82235833378359e-65!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.17726998951057e-63!GO:0043283;biopolymer metabolic process;1.94496094196544e-63!GO:0031981;nuclear lumen;3.63962270884445e-59!GO:0043234;protein complex;5.30549814336606e-59!GO:0006412;translation;6.61119762177095e-58!GO:0005840;ribosome;2.41956289483239e-57!GO:0010467;gene expression;1.89297194906997e-56!GO:0006259;DNA metabolic process;4.6678709944403e-55!GO:0044429;mitochondrial part;9.84707844336245e-53!GO:0031967;organelle envelope;3.29563782616264e-50!GO:0031975;envelope;5.48157041835536e-50!GO:0003735;structural constituent of ribosome;3.36818234176123e-49!GO:0044249;cellular biosynthetic process;2.81945267204162e-48!GO:0016071;mRNA metabolic process;4.29112632872057e-48!GO:0031090;organelle membrane;6.5752824106857e-48!GO:0019538;protein metabolic process;7.84808967180083e-48!GO:0016043;cellular component organization and biogenesis;2.04414549429432e-47!GO:0043228;non-membrane-bound organelle;2.2846031880268e-46!GO:0043232;intracellular non-membrane-bound organelle;2.2846031880268e-46!GO:0044267;cellular protein metabolic process;5.21962326070154e-44!GO:0009058;biosynthetic process;5.97735451800095e-44!GO:0008380;RNA splicing;1.84166802580037e-43!GO:0044260;cellular macromolecule metabolic process;3.73880464656225e-43!GO:0006397;mRNA processing;5.13400736788071e-43!GO:0033279;ribosomal subunit;6.28931079759995e-41!GO:0006996;organelle organization and biogenesis;2.29383755825539e-40!GO:0007049;cell cycle;6.01658894039008e-40!GO:0009059;macromolecule biosynthetic process;1.78988542857258e-39!GO:0003676;nucleic acid binding;3.41268317122418e-39!GO:0033036;macromolecule localization;5.05428736241939e-38!GO:0015031;protein transport;1.59818186845983e-37!GO:0005654;nucleoplasm;4.43384887191386e-37!GO:0005829;cytosol;5.17663861700685e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.65962177439049e-35!GO:0065003;macromolecular complex assembly;3.72854286405541e-35!GO:0005740;mitochondrial envelope;1.13494719717536e-33!GO:0019866;organelle inner membrane;1.70690839181018e-33!GO:0008104;protein localization;1.79906205338514e-33!GO:0045184;establishment of protein localization;2.52365061876987e-33!GO:0000166;nucleotide binding;4.55187910820714e-33!GO:0006974;response to DNA damage stimulus;6.29321975352127e-33!GO:0031966;mitochondrial membrane;4.79176653365066e-32!GO:0046907;intracellular transport;2.40937920088801e-31!GO:0022607;cellular component assembly;6.17154317490089e-31!GO:0005743;mitochondrial inner membrane;6.57608543545164e-31!GO:0005681;spliceosome;7.17559394582588e-31!GO:0005694;chromosome;7.17559394582588e-31!GO:0022402;cell cycle process;1.51624946334373e-29!GO:0044451;nucleoplasm part;2.91871301555797e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.02894417349961e-29!GO:0006281;DNA repair;1.53424259591746e-28!GO:0000278;mitotic cell cycle;3.00457164261049e-28!GO:0016070;RNA metabolic process;1.14153273152822e-27!GO:0044427;chromosomal part;2.6667020036891e-27!GO:0006886;intracellular protein transport;1.74583789549241e-25!GO:0016462;pyrophosphatase activity;3.64540855212392e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.9868291930593e-25!GO:0016817;hydrolase activity, acting on acid anhydrides;6.39497333549613e-25!GO:0006260;DNA replication;7.59454615424504e-25!GO:0017111;nucleoside-triphosphatase activity;1.83571079801793e-24!GO:0009719;response to endogenous stimulus;2.20390437969428e-24!GO:0016874;ligase activity;2.76097494586727e-24!GO:0005730;nucleolus;3.41297689410788e-24!GO:0031980;mitochondrial lumen;5.18396230186773e-24!GO:0005759;mitochondrial matrix;5.18396230186773e-24!GO:0044445;cytosolic part;6.19897705168498e-24!GO:0022403;cell cycle phase;1.5394784430007e-23!GO:0006119;oxidative phosphorylation;1.5394784430007e-23!GO:0051276;chromosome organization and biogenesis;3.11498887107436e-23!GO:0044455;mitochondrial membrane part;1.48196350479718e-22!GO:0006457;protein folding;1.85380163801571e-22!GO:0032553;ribonucleotide binding;3.0427743612443e-22!GO:0032555;purine ribonucleotide binding;3.0427743612443e-22!GO:0017076;purine nucleotide binding;4.51256545726765e-22!GO:0005524;ATP binding;9.05440792042226e-22!GO:0015934;large ribosomal subunit;1.35701879874921e-21!GO:0032559;adenyl ribonucleotide binding;1.37080284089717e-21!GO:0030554;adenyl nucleotide binding;4.18254573979501e-21!GO:0000087;M phase of mitotic cell cycle;5.46030287442908e-21!GO:0007067;mitosis;1.46279166901826e-20!GO:0015935;small ribosomal subunit;1.84873515117396e-20!GO:0006512;ubiquitin cycle;1.03416162389699e-19!GO:0051649;establishment of cellular localization;2.98324763444092e-19!GO:0022618;protein-RNA complex assembly;3.16232024142537e-19!GO:0051641;cellular localization;6.4387812814636e-19!GO:0000279;M phase;7.35918438851792e-19!GO:0051301;cell division;8.42320061341159e-19!GO:0044265;cellular macromolecule catabolic process;2.2490240858858e-18!GO:0051186;cofactor metabolic process;4.35857734418319e-18!GO:0012505;endomembrane system;4.9314701332056e-18!GO:0005746;mitochondrial respiratory chain;5.69336028557098e-18!GO:0008134;transcription factor binding;7.95981117140721e-18!GO:0016887;ATPase activity;9.93495317834739e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;1.11979105926837e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.67490705545002e-17!GO:0042254;ribosome biogenesis and assembly;1.72839678487799e-17!GO:0019941;modification-dependent protein catabolic process;2.93470868102574e-17!GO:0043632;modification-dependent macromolecule catabolic process;2.93470868102574e-17!GO:0044453;nuclear membrane part;3.02600349704611e-17!GO:0008135;translation factor activity, nucleic acid binding;3.09492296571788e-17!GO:0006511;ubiquitin-dependent protein catabolic process;3.24334116694818e-17!GO:0006323;DNA packaging;5.05081622961139e-17!GO:0044257;cellular protein catabolic process;5.61212397412099e-17!GO:0005635;nuclear envelope;6.58796958067486e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.17837806629387e-16!GO:0031965;nuclear membrane;1.33560604633503e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.65755814889409e-16!GO:0042623;ATPase activity, coupled;1.89912244969667e-16!GO:0005761;mitochondrial ribosome;4.16054416164581e-16!GO:0000313;organellar ribosome;4.16054416164581e-16!GO:0005783;endoplasmic reticulum;4.62264859086209e-16!GO:0050136;NADH dehydrogenase (quinone) activity;7.33987729675081e-16!GO:0003954;NADH dehydrogenase activity;7.33987729675081e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.33987729675081e-16!GO:0044248;cellular catabolic process;1.63485947795439e-15!GO:0043285;biopolymer catabolic process;1.89452972140756e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;2.0135525808732e-15!GO:0000375;RNA splicing, via transesterification reactions;2.0135525808732e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.0135525808732e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.34222555766198e-15!GO:0051082;unfolded protein binding;2.58601694888884e-15!GO:0006399;tRNA metabolic process;3.6152909355517e-15!GO:0044432;endoplasmic reticulum part;3.62272141737212e-15!GO:0006732;coenzyme metabolic process;3.64589769329202e-15!GO:0006605;protein targeting;4.98706872189895e-15!GO:0005643;nuclear pore;7.92183001661764e-15!GO:0009057;macromolecule catabolic process;9.71896406309376e-15!GO:0006366;transcription from RNA polymerase II promoter;1.09955092969349e-14!GO:0000785;chromatin;2.29071235755931e-14!GO:0042775;organelle ATP synthesis coupled electron transport;2.37938505425195e-14!GO:0042773;ATP synthesis coupled electron transport;2.37938505425195e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.5061159759048e-14!GO:0051726;regulation of cell cycle;4.63964044852894e-14!GO:0004386;helicase activity;4.76046521803946e-14!GO:0050657;nucleic acid transport;5.29372579199036e-14!GO:0051236;establishment of RNA localization;5.29372579199036e-14!GO:0050658;RNA transport;5.29372579199036e-14!GO:0006403;RNA localization;6.53917191747325e-14!GO:0030964;NADH dehydrogenase complex (quinone);8.37938269379879e-14!GO:0045271;respiratory chain complex I;8.37938269379879e-14!GO:0005747;mitochondrial respiratory chain complex I;8.37938269379879e-14!GO:0000074;regulation of progression through cell cycle;9.46322940700999e-14!GO:0016604;nuclear body;1.606385092613e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.00062808131345e-13!GO:0003743;translation initiation factor activity;2.52940086467556e-13!GO:0043412;biopolymer modification;2.52940086467556e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.97318568561246e-13!GO:0006333;chromatin assembly or disassembly;4.63613706591572e-13!GO:0048770;pigment granule;6.46086876155877e-13!GO:0042470;melanosome;6.46086876155877e-13!GO:0065004;protein-DNA complex assembly;6.92024589415098e-13!GO:0030163;protein catabolic process;8.28268753407526e-13!GO:0046930;pore complex;8.72952248470932e-13!GO:0006261;DNA-dependent DNA replication;1.47352703978231e-12!GO:0006913;nucleocytoplasmic transport;1.51415833418321e-12!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.91276211170957e-12!GO:0051169;nuclear transport;3.97491693134091e-12!GO:0006364;rRNA processing;4.15861017654714e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.21639397683461e-12!GO:0051028;mRNA transport;5.49324298061636e-12!GO:0065002;intracellular protein transport across a membrane;8.52159901794614e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.79725265319543e-12!GO:0012501;programmed cell death;9.21783526475101e-12!GO:0006413;translational initiation;9.29516979197119e-12!GO:0005789;endoplasmic reticulum membrane;9.7507675637822e-12!GO:0003712;transcription cofactor activity;1.29474375812105e-11!GO:0016072;rRNA metabolic process;1.33777088672634e-11!GO:0006915;apoptosis;2.0438467969402e-11!GO:0016568;chromatin modification;3.27810831745669e-11!GO:0043566;structure-specific DNA binding;4.19603531160336e-11!GO:0008026;ATP-dependent helicase activity;4.39144637421242e-11!GO:0009055;electron carrier activity;4.57682459397253e-11!GO:0048193;Golgi vesicle transport;5.16829542127856e-11!GO:0000775;chromosome, pericentric region;7.47286269207794e-11!GO:0016607;nuclear speck;8.99156096712616e-11!GO:0006464;protein modification process;9.3766692327623e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;9.77764658801361e-11!GO:0004812;aminoacyl-tRNA ligase activity;9.77764658801361e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;9.77764658801361e-11!GO:0006446;regulation of translational initiation;1.13144663614614e-10!GO:0009259;ribonucleotide metabolic process;1.50723461512452e-10!GO:0051188;cofactor biosynthetic process;1.788364432283e-10!GO:0043038;amino acid activation;1.95899741244572e-10!GO:0006418;tRNA aminoacylation for protein translation;1.95899741244572e-10!GO:0043039;tRNA aminoacylation;1.95899741244572e-10!GO:0006163;purine nucleotide metabolic process;2.00115293249583e-10!GO:0008219;cell death;2.67459267351246e-10!GO:0016265;death;2.67459267351246e-10!GO:0003697;single-stranded DNA binding;3.45073879075406e-10!GO:0008639;small protein conjugating enzyme activity;3.68805942334378e-10!GO:0043687;post-translational protein modification;6.96671226010675e-10!GO:0004842;ubiquitin-protein ligase activity;1.07371203135138e-09!GO:0019787;small conjugating protein ligase activity;1.40051487726304e-09!GO:0006164;purine nucleotide biosynthetic process;1.66928959032907e-09!GO:0051329;interphase of mitotic cell cycle;1.8309123477017e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.18680123494098e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.2232918452967e-09!GO:0009150;purine ribonucleotide metabolic process;2.98755886851e-09!GO:0009260;ribonucleotide biosynthetic process;3.33244430162655e-09!GO:0051325;interphase;3.38378109758456e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.49137077654826e-09!GO:0015630;microtubule cytoskeleton;4.07533191598766e-09!GO:0005657;replication fork;4.14402826147965e-09!GO:0017038;protein import;4.25803486475109e-09!GO:0016779;nucleotidyltransferase activity;5.09639467568563e-09!GO:0005819;spindle;5.66680160748999e-09!GO:0009108;coenzyme biosynthetic process;6.68894605450487e-09!GO:0016787;hydrolase activity;7.74956859924931e-09!GO:0006461;protein complex assembly;1.01058302353872e-08!GO:0008565;protein transporter activity;1.01642026504946e-08!GO:0007005;mitochondrion organization and biogenesis;1.06683527118495e-08!GO:0016881;acid-amino acid ligase activity;1.11903518225746e-08!GO:0009060;aerobic respiration;1.25264990061759e-08!GO:0005667;transcription factor complex;1.4598072589488e-08!GO:0015986;ATP synthesis coupled proton transport;1.5153095096735e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.5153095096735e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.63969953330939e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.16665463411197e-08!GO:0016192;vesicle-mediated transport;2.18759895773465e-08!GO:0006334;nucleosome assembly;2.31415646791368e-08!GO:0009141;nucleoside triphosphate metabolic process;2.38891600538687e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.39999444703237e-08!GO:0045333;cellular respiration;2.44230834644592e-08!GO:0031497;chromatin assembly;3.53965713024213e-08!GO:0009056;catabolic process;4.19254701041542e-08!GO:0007051;spindle organization and biogenesis;4.54900999034346e-08!GO:0046034;ATP metabolic process;5.2479299352188e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.3118463357726e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.3118463357726e-08!GO:0005794;Golgi apparatus;5.65228501354435e-08!GO:0006752;group transfer coenzyme metabolic process;6.36367022509008e-08!GO:0009142;nucleoside triphosphate biosynthetic process;7.59427439860295e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.59427439860295e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.0800182886874e-07!GO:0006754;ATP biosynthetic process;1.36761380270328e-07!GO:0006753;nucleoside phosphate metabolic process;1.36761380270328e-07!GO:0050794;regulation of cellular process;1.39221044011773e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.40463078390832e-07!GO:0005793;ER-Golgi intermediate compartment;1.42671739727569e-07!GO:0005813;centrosome;1.43791373200355e-07!GO:0000075;cell cycle checkpoint;1.45856423124651e-07!GO:0019829;cation-transporting ATPase activity;1.58125149130667e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.89364056911777e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.89364056911777e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.98622325577837e-07!GO:0008094;DNA-dependent ATPase activity;2.08834911742268e-07!GO:0000245;spliceosome assembly;2.08834911742268e-07!GO:0006302;double-strand break repair;2.26725192195573e-07!GO:0032446;protein modification by small protein conjugation;2.369345777284e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.57540594438304e-07!GO:0009117;nucleotide metabolic process;2.7777643012893e-07!GO:0016740;transferase activity;2.81465087003842e-07!GO:0016567;protein ubiquitination;3.18162444246281e-07!GO:0005815;microtubule organizing center;3.86359774142788e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.46179565392958e-07!GO:0043623;cellular protein complex assembly;5.82024921439126e-07!GO:0003682;chromatin binding;6.16431710683615e-07!GO:0006099;tricarboxylic acid cycle;6.35006787909017e-07!GO:0046356;acetyl-CoA catabolic process;6.35006787909017e-07!GO:0016564;transcription repressor activity;6.76845045990126e-07!GO:0019222;regulation of metabolic process;7.18193007391703e-07!GO:0045259;proton-transporting ATP synthase complex;8.62124485249011e-07!GO:0003899;DNA-directed RNA polymerase activity;9.16551555536436e-07!GO:0003713;transcription coactivator activity;9.25146046997531e-07!GO:0006084;acetyl-CoA metabolic process;1.01692736546346e-06!GO:0042981;regulation of apoptosis;1.21734751019777e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.22931494928156e-06!GO:0016741;transferase activity, transferring one-carbon groups;1.3106383082369e-06!GO:0031324;negative regulation of cellular metabolic process;1.3228119111519e-06!GO:0008168;methyltransferase activity;1.43608640698521e-06!GO:0043067;regulation of programmed cell death;1.44629284003562e-06!GO:0051170;nuclear import;1.83779989744279e-06!GO:0051427;hormone receptor binding;2.51694289679855e-06!GO:0000151;ubiquitin ligase complex;2.81787979453923e-06!GO:0003690;double-stranded DNA binding;2.89434019297512e-06!GO:0005768;endosome;3.24595224424995e-06!GO:0051168;nuclear export;3.36319643772976e-06!GO:0003724;RNA helicase activity;3.4078469738028e-06!GO:0008033;tRNA processing;3.44468265632751e-06!GO:0007059;chromosome segregation;4.24760357656472e-06!GO:0051052;regulation of DNA metabolic process;5.05679182520806e-06!GO:0006414;translational elongation;5.55238515257094e-06!GO:0035257;nuclear hormone receptor binding;5.84111373157659e-06!GO:0051246;regulation of protein metabolic process;6.35456237383889e-06!GO:0006606;protein import into nucleus;6.46392048491384e-06!GO:0000079;regulation of cyclin-dependent protein kinase activity;6.48324983058871e-06!GO:0004298;threonine endopeptidase activity;6.55868900117948e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.73374160831013e-06!GO:0009109;coenzyme catabolic process;7.00094519939664e-06!GO:0048523;negative regulation of cellular process;7.43542752479434e-06!GO:0016491;oxidoreductase activity;7.64818442451118e-06!GO:0006888;ER to Golgi vesicle-mediated transport;8.92832710206483e-06!GO:0016853;isomerase activity;9.0152125991257e-06!GO:0051187;cofactor catabolic process;1.27000700088716e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.36600695677663e-05!GO:0006613;cotranslational protein targeting to membrane;1.40890356747918e-05!GO:0009892;negative regulation of metabolic process;1.41214583405555e-05!GO:0006793;phosphorus metabolic process;1.59739266659201e-05!GO:0006796;phosphate metabolic process;1.59739266659201e-05!GO:0043069;negative regulation of programmed cell death;1.61921769214389e-05!GO:0030120;vesicle coat;1.62478067244707e-05!GO:0030662;coated vesicle membrane;1.62478067244707e-05!GO:0005762;mitochondrial large ribosomal subunit;1.78608652869351e-05!GO:0000315;organellar large ribosomal subunit;1.78608652869351e-05!GO:0048475;coated membrane;1.79142614143432e-05!GO:0030117;membrane coat;1.79142614143432e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.888993715053e-05!GO:0000776;kinetochore;2.01321905036892e-05!GO:0006916;anti-apoptosis;2.01321905036892e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.25428710522901e-05!GO:0016363;nuclear matrix;2.30490004096724e-05!GO:0008654;phospholipid biosynthetic process;2.36893532668375e-05!GO:0045786;negative regulation of progression through cell cycle;2.36893532668375e-05!GO:0043066;negative regulation of apoptosis;2.37964939381969e-05!GO:0046483;heterocycle metabolic process;2.42392549625444e-05!GO:0006352;transcription initiation;2.48982543428268e-05!GO:0006091;generation of precursor metabolites and energy;2.57621523437183e-05!GO:0016859;cis-trans isomerase activity;2.8355106514165e-05!GO:0016563;transcription activator activity;3.0668388143458e-05!GO:0006310;DNA recombination;3.28277506581253e-05!GO:0000314;organellar small ribosomal subunit;3.2971561822084e-05!GO:0005763;mitochondrial small ribosomal subunit;3.2971561822084e-05!GO:0003684;damaged DNA binding;3.87843195904709e-05!GO:0006270;DNA replication initiation;4.00268450402993e-05!GO:0044452;nucleolar part;4.36285590544344e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;4.36455989087555e-05!GO:0004527;exonuclease activity;4.5117835045422e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;5.14208109553656e-05!GO:0019752;carboxylic acid metabolic process;5.80194327681166e-05!GO:0003714;transcription corepressor activity;5.95532908978832e-05!GO:0031323;regulation of cellular metabolic process;5.9854213808879e-05!GO:0006082;organic acid metabolic process;7.23905493139821e-05!GO:0000786;nucleosome;8.34090016662433e-05!GO:0000059;protein import into nucleus, docking;8.57362219331659e-05!GO:0007052;mitotic spindle organization and biogenesis;0.000102486673426357!GO:0008186;RNA-dependent ATPase activity;0.000102660099177475!GO:0005788;endoplasmic reticulum lumen;0.000103426400438812!GO:0006402;mRNA catabolic process;0.000107832502262422!GO:0004518;nuclease activity;0.000112419322770887!GO:0016310;phosphorylation;0.000115055859576054!GO:0003729;mRNA binding;0.000121381568248391!GO:0005770;late endosome;0.000124504416748668!GO:0043021;ribonucleoprotein binding;0.000133414808056028!GO:0003924;GTPase activity;0.00013848122597067!GO:0048519;negative regulation of biological process;0.000139901102353644!GO:0043596;nuclear replication fork;0.000141071167853031!GO:0007088;regulation of mitosis;0.000147776633115705!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000147776633115705!GO:0015399;primary active transmembrane transporter activity;0.000147776633115705!GO:0009165;nucleotide biosynthetic process;0.000157593387129352!GO:0032508;DNA duplex unwinding;0.000159020670290566!GO:0032392;DNA geometric change;0.000159020670290566!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000161920614680818!GO:0045454;cell redox homeostasis;0.000178854294239578!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000179638210866829!GO:0006839;mitochondrial transport;0.000184370722670568!GO:0000049;tRNA binding;0.000193029075264218!GO:0003678;DNA helicase activity;0.00019799626761855!GO:0016481;negative regulation of transcription;0.000209846440352477!GO:0048471;perinuclear region of cytoplasm;0.000216341436246039!GO:0006284;base-excision repair;0.000221999526323814!GO:0050789;regulation of biological process;0.000233458384032997!GO:0031072;heat shock protein binding;0.000255326448429291!GO:0006612;protein targeting to membrane;0.000258145690186063!GO:0043681;protein import into mitochondrion;0.000269510166469555!GO:0015980;energy derivation by oxidation of organic compounds;0.000270759132492874!GO:0044440;endosomal part;0.000287225063179002!GO:0010008;endosome membrane;0.000287225063179002!GO:0006350;transcription;0.000287810401940985!GO:0004004;ATP-dependent RNA helicase activity;0.000297289592191144!GO:0051252;regulation of RNA metabolic process;0.000301656124927127!GO:0005798;Golgi-associated vesicle;0.000340302895821572!GO:0006268;DNA unwinding during replication;0.000352808608615611!GO:0009112;nucleobase metabolic process;0.000352808608615611!GO:0003702;RNA polymerase II transcription factor activity;0.000362730233041196!GO:0006950;response to stress;0.000372979608895923!GO:0006626;protein targeting to mitochondrion;0.000423076664334719!GO:0006275;regulation of DNA replication;0.000423076664334719!GO:0000228;nuclear chromosome;0.00043948683222735!GO:0051789;response to protein stimulus;0.000493832584575133!GO:0006986;response to unfolded protein;0.000493832584575133!GO:0005791;rough endoplasmic reticulum;0.000497027726511576!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000497565193432108!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000509097036986096!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000509623241436135!GO:0006401;RNA catabolic process;0.000524279974541838!GO:0043601;nuclear replisome;0.000524279974541838!GO:0030894;replisome;0.000524279974541838!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000529215472135563!GO:0042802;identical protein binding;0.000529483968041339!GO:0051920;peroxiredoxin activity;0.000535233667871102!GO:0005684;U2-dependent spliceosome;0.000536524109362304!GO:0030880;RNA polymerase complex;0.000567753620953921!GO:0046474;glycerophospholipid biosynthetic process;0.000569718709120894!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000599246429269602!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000622763669167517!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000633252321591768!GO:0030867;rough endoplasmic reticulum membrane;0.000651901315634533!GO:0003711;transcription elongation regulator activity;0.000663546611478888!GO:0006405;RNA export from nucleus;0.000681748461284732!GO:0050662;coenzyme binding;0.00068326462608212!GO:0019867;outer membrane;0.000732180557852879!GO:0016251;general RNA polymerase II transcription factor activity;0.000747204482126433!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000839571023300397!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000839571023300397!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000839571023300397!GO:0031968;organelle outer membrane;0.000854725427800879!GO:0000082;G1/S transition of mitotic cell cycle;0.000915869825027882!GO:0005048;signal sequence binding;0.000922621788995471!GO:0015631;tubulin binding;0.000924368481185902!GO:0046489;phosphoinositide biosynthetic process;0.00096778829228153!GO:0000922;spindle pole;0.000986526501761017!GO:0015992;proton transport;0.00100389884067016!GO:0003746;translation elongation factor activity;0.0010522092931149!GO:0000096;sulfur amino acid metabolic process;0.00111391055967004!GO:0006818;hydrogen transport;0.0011730634073818!GO:0019899;enzyme binding;0.00118369246798817!GO:0048522;positive regulation of cellular process;0.00120175802463798!GO:0043492;ATPase activity, coupled to movement of substances;0.00124111968593135!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00126545658558381!GO:0000428;DNA-directed RNA polymerase complex;0.00126545658558381!GO:0005637;nuclear inner membrane;0.00127384828818214!GO:0007093;mitotic cell cycle checkpoint;0.00127936742663092!GO:0005876;spindle microtubule;0.00135861137578835!GO:0035258;steroid hormone receptor binding;0.00136716778273917!GO:0006383;transcription from RNA polymerase III promoter;0.00137668963132408!GO:0033116;ER-Golgi intermediate compartment membrane;0.0014179276193622!GO:0065009;regulation of a molecular function;0.00142753734591803!GO:0006520;amino acid metabolic process;0.00142845695914141!GO:0030521;androgen receptor signaling pathway;0.00147803915191569!GO:0000725;recombinational repair;0.00147905069909927!GO:0000724;double-strand break repair via homologous recombination;0.00147905069909927!GO:0043414;biopolymer methylation;0.00148108674221619!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00150014496531653!GO:0042770;DNA damage response, signal transduction;0.00151500132821809!GO:0048487;beta-tubulin binding;0.00152153787451141!GO:0043284;biopolymer biosynthetic process;0.00152311159389429!GO:0048037;cofactor binding;0.00152311159389429!GO:0010468;regulation of gene expression;0.00163405020090744!GO:0032259;methylation;0.00165775395014298!GO:0006289;nucleotide-excision repair;0.00170339535341079!GO:0008022;protein C-terminus binding;0.00172163134535329!GO:0000819;sister chromatid segregation;0.00176011116271282!GO:0008312;7S RNA binding;0.00178067104323253!GO:0019843;rRNA binding;0.00178067104323253!GO:0042393;histone binding;0.00179219260504077!GO:0004674;protein serine/threonine kinase activity;0.00183456020266158!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00184516741493431!GO:0007050;cell cycle arrest;0.00194376376597016!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00196729406326219!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00196729406326219!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00196729406326219!GO:0048500;signal recognition particle;0.00198049399225062!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0020440998743115!GO:0005874;microtubule;0.00206847633407334!GO:0000070;mitotic sister chromatid segregation;0.00209552449135943!GO:0031124;mRNA 3'-end processing;0.00224364733725647!GO:0031252;leading edge;0.00225568446230152!GO:0022890;inorganic cation transmembrane transporter activity;0.00226534301127273!GO:0008276;protein methyltransferase activity;0.00226534301127273!GO:0006611;protein export from nucleus;0.00230968780016415!GO:0043488;regulation of mRNA stability;0.00240130039760324!GO:0043487;regulation of RNA stability;0.00240130039760324!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0024506764512757!GO:0006144;purine base metabolic process;0.00254076070122705!GO:0005885;Arp2/3 protein complex;0.00254391070028763!GO:0007017;microtubule-based process;0.002547144390964!GO:0051087;chaperone binding;0.00259481077594225!GO:0005741;mitochondrial outer membrane;0.00261796283468449!GO:0009116;nucleoside metabolic process;0.00269761613878722!GO:0006595;polyamine metabolic process;0.00282482768395341!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00285713885921431!GO:0032200;telomere organization and biogenesis;0.00292543454162574!GO:0000723;telomere maintenance;0.00292543454162574!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00296095814824875!GO:0008408;3'-5' exonuclease activity;0.00298376841356883!GO:0008250;oligosaccharyl transferase complex;0.00307816451524899!GO:0007006;mitochondrial membrane organization and biogenesis;0.00322834520901336!GO:0005525;GTP binding;0.00332388328051409!GO:0006338;chromatin remodeling;0.00376986265466151!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00377575418861042!GO:0046983;protein dimerization activity;0.0038402439576927!GO:0031570;DNA integrity checkpoint;0.00395056546864108!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00422146399343724!GO:0016272;prefoldin complex;0.00427122190090876!GO:0007010;cytoskeleton organization and biogenesis;0.00427504681219417!GO:0008139;nuclear localization sequence binding;0.00427504681219417!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00430095890267246!GO:0009451;RNA modification;0.00432365116384229!GO:0051287;NAD binding;0.00437250421351587!GO:0051540;metal cluster binding;0.00437250421351587!GO:0051536;iron-sulfur cluster binding;0.00437250421351587!GO:0005769;early endosome;0.00445129972270051!GO:0005773;vacuole;0.00455971991962!GO:0004576;oligosaccharyl transferase activity;0.00459425247193358!GO:0030176;integral to endoplasmic reticulum membrane;0.00466245363415662!GO:0000086;G2/M transition of mitotic cell cycle;0.00476674395110702!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00491658580900444!GO:0045047;protein targeting to ER;0.00491658580900444!GO:0051053;negative regulation of DNA metabolic process;0.00496321556742822!GO:0005669;transcription factor TFIID complex;0.00497260334540218!GO:0045892;negative regulation of transcription, DNA-dependent;0.00564778572805144!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00570748934615189!GO:0005663;DNA replication factor C complex;0.00580855893219204!GO:0032774;RNA biosynthetic process;0.00585508021728831!GO:0006506;GPI anchor biosynthetic process;0.00602265385613143!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00608999512850231!GO:0003677;DNA binding;0.00621835258279342!GO:0031123;RNA 3'-end processing;0.00622683504045154!GO:0044431;Golgi apparatus part;0.00641274677822168!GO:0000792;heterochromatin;0.00646779060058232!GO:0044454;nuclear chromosome part;0.00651587450406888!GO:0046966;thyroid hormone receptor binding;0.00674622237817371!GO:0008361;regulation of cell size;0.00679089797743604!GO:0006351;transcription, DNA-dependent;0.0072437482262792!GO:0040029;regulation of gene expression, epigenetic;0.0072437482262792!GO:0000178;exosome (RNase complex);0.00739154004624095!GO:0000287;magnesium ion binding;0.00753809128944718!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00809737544127258!GO:0000339;RNA cap binding;0.00815615201413518!GO:0006378;mRNA polyadenylation;0.00854654587184725!GO:0043022;ribosome binding;0.00872720984411268!GO:0006376;mRNA splice site selection;0.00885854449171068!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00885854449171068!GO:0031988;membrane-bound vesicle;0.00913258355955986!GO:0006505;GPI anchor metabolic process;0.00915325643551031!GO:0019783;small conjugating protein-specific protease activity;0.00918105160167699!GO:0008234;cysteine-type peptidase activity;0.00930781879527782!GO:0008632;apoptotic program;0.00936531778118689!GO:0030132;clathrin coat of coated pit;0.00938187324990567!GO:0005832;chaperonin-containing T-complex;0.00943112432083765!GO:0007004;telomere maintenance via telomerase;0.0094647811722322!GO:0000781;chromosome, telomeric region;0.00947967490375503!GO:0006400;tRNA modification;0.00947967490375503!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00947967490375503!GO:0006650;glycerophospholipid metabolic process;0.00952251442166447!GO:0030658;transport vesicle membrane;0.00956947753121743!GO:0006417;regulation of translation;0.00964558998047251!GO:0043065;positive regulation of apoptosis;0.00971120647502723!GO:0003887;DNA-directed DNA polymerase activity;0.00977927223214988!GO:0006519;amino acid and derivative metabolic process;0.00980161633210046!GO:0008017;microtubule binding;0.00981139143444453!GO:0046467;membrane lipid biosynthetic process;0.00991658694497406!GO:0016049;cell growth;0.0101760475650191!GO:0003725;double-stranded RNA binding;0.0101760475650191!GO:0030384;phosphoinositide metabolic process;0.0103094506119611!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0104493282186533!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0105896558235007!GO:0006891;intra-Golgi vesicle-mediated transport;0.0105896558235007!GO:0050681;androgen receptor binding;0.0106756780285286!GO:0004523;ribonuclease H activity;0.0107097458794055!GO:0043624;cellular protein complex disassembly;0.0107963552958688!GO:0006118;electron transport;0.0109845730891585!GO:0030663;COPI coated vesicle membrane;0.0110432294622242!GO:0030126;COPI vesicle coat;0.0110432294622242!GO:0008180;signalosome;0.0113065687212255!GO:0016126;sterol biosynthetic process;0.0113065687212255!GO:0016790;thiolester hydrolase activity;0.0113292313561055!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0114556126375477!GO:0015002;heme-copper terminal oxidase activity;0.0114556126375477!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0114556126375477!GO:0004129;cytochrome-c oxidase activity;0.0114556126375477!GO:0000323;lytic vacuole;0.0114702475209773!GO:0005764;lysosome;0.0114702475209773!GO:0006497;protein amino acid lipidation;0.0115565249885268!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0116178209285385!GO:0016197;endosome transport;0.0119573191343703!GO:0004843;ubiquitin-specific protease activity;0.0120724840630673!GO:0004003;ATP-dependent DNA helicase activity;0.0125257153350555!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0125257153350555!GO:0045893;positive regulation of transcription, DNA-dependent;0.0125257153350555!GO:0009124;nucleoside monophosphate biosynthetic process;0.0126850059641927!GO:0009123;nucleoside monophosphate metabolic process;0.0126850059641927!GO:0043068;positive regulation of programmed cell death;0.0127548001584562!GO:0018196;peptidyl-asparagine modification;0.0130391881769729!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0130391881769729!GO:0007034;vacuolar transport;0.0130391881769729!GO:0016023;cytoplasmic membrane-bound vesicle;0.013156206669406!GO:0008170;N-methyltransferase activity;0.0136756888962974!GO:0009889;regulation of biosynthetic process;0.0138715720608934!GO:0001889;liver development;0.0141616772703785!GO:0030518;steroid hormone receptor signaling pathway;0.0141763420800568!GO:0001558;regulation of cell growth;0.0143397864752526!GO:0000910;cytokinesis;0.0144267693667721!GO:0006007;glucose catabolic process;0.0144872921581872!GO:0016788;hydrolase activity, acting on ester bonds;0.0146179563709391!GO:0005869;dynactin complex;0.0146919322953834!GO:0043433;negative regulation of transcription factor activity;0.0152479287328233!GO:0009119;ribonucleoside metabolic process;0.0154281223701237!GO:0006730;one-carbon compound metabolic process;0.015516160018252!GO:0030137;COPI-coated vesicle;0.0157996498575862!GO:0008652;amino acid biosynthetic process;0.0158372596730814!GO:0006695;cholesterol biosynthetic process;0.0158372596730814!GO:0005758;mitochondrial intermembrane space;0.0158882370424776!GO:0000097;sulfur amino acid biosynthetic process;0.0159271273272637!GO:0022411;cellular component disassembly;0.0160540942045862!GO:0005905;coated pit;0.0160742846241013!GO:0030660;Golgi-associated vesicle membrane;0.0161898229206714!GO:0030118;clathrin coat;0.01630563401322!GO:0031326;regulation of cellular biosynthetic process;0.016365517569692!GO:0006213;pyrimidine nucleoside metabolic process;0.0170139297518426!GO:0008156;negative regulation of DNA replication;0.0170781797142953!GO:0005658;alpha DNA polymerase:primase complex;0.0170934901001066!GO:0032561;guanyl ribonucleotide binding;0.0172202540613409!GO:0019001;guanyl nucleotide binding;0.0172202540613409!GO:0000726;non-recombinational repair;0.0173045701440094!GO:0008637;apoptotic mitochondrial changes;0.0174053441249544!GO:0045941;positive regulation of transcription;0.0175748689452746!GO:0008610;lipid biosynthetic process;0.0177158292970656!GO:0004221;ubiquitin thiolesterase activity;0.0177339016118694!GO:0033673;negative regulation of kinase activity;0.0184420461174074!GO:0006469;negative regulation of protein kinase activity;0.0184420461174074!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0186074639549629!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0186590912370054!GO:0000077;DNA damage checkpoint;0.0189740937000363!GO:0051059;NF-kappaB binding;0.0189740937000363!GO:0006767;water-soluble vitamin metabolic process;0.0190322751688674!GO:0042054;histone methyltransferase activity;0.0192091088126628!GO:0017166;vinculin binding;0.01942132393698!GO:0051539;4 iron, 4 sulfur cluster binding;0.0195989688469255!GO:0046982;protein heterodimerization activity;0.0199955903849895!GO:0032984;macromolecular complex disassembly;0.0201301640948012!GO:0007346;regulation of progression through mitotic cell cycle;0.0201673844250452!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0203289701516729!GO:0033170;DNA-protein loading ATPase activity;0.0203537826199377!GO:0003689;DNA clamp loader activity;0.0203537826199377!GO:0006596;polyamine biosynthetic process;0.0206469964605756!GO:0006541;glutamine metabolic process;0.0206541307831523!GO:0046112;nucleobase biosynthetic process;0.0208995934677439!GO:0031982;vesicle;0.0209255983892293!GO:0006360;transcription from RNA polymerase I promoter;0.0211448900306548!GO:0045936;negative regulation of phosphate metabolic process;0.021496686081349!GO:0030134;ER to Golgi transport vesicle;0.0217612799375244!GO:0035267;NuA4 histone acetyltransferase complex;0.0218256010772403!GO:0004532;exoribonuclease activity;0.0221705110054928!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0221705110054928!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.022387162753363!GO:0050790;regulation of catalytic activity;0.0226344887638788!GO:0008538;proteasome activator activity;0.0226861748177792!GO:0007021;tubulin folding;0.0229568976935631!GO:0051320;S phase;0.0229868540882213!GO:0006354;RNA elongation;0.0233224334731706!GO:0006301;postreplication repair;0.0233449808654678!GO:0016407;acetyltransferase activity;0.024014786993108!GO:0051716;cellular response to stimulus;0.0240621494013437!GO:0006733;oxidoreduction coenzyme metabolic process;0.0242258250954138!GO:0000793;condensed chromosome;0.0242463283059937!GO:0051348;negative regulation of transferase activity;0.0244193700276297!GO:0000080;G1 phase of mitotic cell cycle;0.0244345484403604!GO:0044450;microtubule organizing center part;0.0247106526735918!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0249233797881472!GO:0010257;NADH dehydrogenase complex assembly;0.0249233797881472!GO:0033108;mitochondrial respiratory chain complex assembly;0.0249233797881472!GO:0042158;lipoprotein biosynthetic process;0.0249233797881472!GO:0030433;ER-associated protein catabolic process;0.0249430693716516!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0249430693716516!GO:0043189;H4/H2A histone acetyltransferase complex;0.0249430693716516!GO:0016044;membrane organization and biogenesis;0.0250235833647932!GO:0006406;mRNA export from nucleus;0.0253025757371401!GO:0030503;regulation of cell redox homeostasis;0.0260586258738551!GO:0004536;deoxyribonuclease activity;0.0260586258738551!GO:0030508;thiol-disulfide exchange intermediate activity;0.0261059969571414!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0261786938920786!GO:0043241;protein complex disassembly;0.0264020594878735!GO:0008097;5S rRNA binding;0.026421951782791!GO:0009161;ribonucleoside monophosphate metabolic process;0.0264924007839617!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0264924007839617!GO:0005862;muscle thin filament tropomyosin;0.0265541465377961!GO:0045792;negative regulation of cell size;0.0272112790589762!GO:0045449;regulation of transcription;0.0272284928070211!GO:0047485;protein N-terminus binding;0.0272906653453578!GO:0048518;positive regulation of biological process;0.0272933053074643!GO:0005487;nucleocytoplasmic transporter activity;0.0274748851944465!GO:0051338;regulation of transferase activity;0.0284490245337797!GO:0000084;S phase of mitotic cell cycle;0.029300927662297!GO:0004860;protein kinase inhibitor activity;0.029300927662297!GO:0019206;nucleoside kinase activity;0.0307510652010768!GO:0004659;prenyltransferase activity;0.0308877317718333!GO:0004861;cyclin-dependent protein kinase inhibitor activity;0.0310891001070549!GO:0031410;cytoplasmic vesicle;0.0313235178307572!GO:0006458;'de novo' protein folding;0.0313451681671741!GO:0051084;'de novo' posttranslational protein folding;0.0313451681671741!GO:0022406;membrane docking;0.0313996939803968!GO:0048278;vesicle docking;0.0313996939803968!GO:0007243;protein kinase cascade;0.031762034301006!GO:0005996;monosaccharide metabolic process;0.0320140281783584!GO:0019318;hexose metabolic process;0.0322658612356089!GO:0016279;protein-lysine N-methyltransferase activity;0.0323907551635364!GO:0018024;histone-lysine N-methyltransferase activity;0.0323907551635364!GO:0016278;lysine N-methyltransferase activity;0.0323907551635364!GO:0043549;regulation of kinase activity;0.0324664106546648!GO:0006740;NADPH regeneration;0.0326498919437077!GO:0006098;pentose-phosphate shunt;0.0326498919437077!GO:0044438;microbody part;0.0326498919437077!GO:0044439;peroxisomal part;0.0326498919437077!GO:0032039;integrator complex;0.0328983728558599!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0335484425900453!GO:0030174;regulation of DNA replication initiation;0.0337893001161085!GO:0031577;spindle checkpoint;0.0338995549667317!GO:0016408;C-acyltransferase activity;0.0340233647311622!GO:0030308;negative regulation of cell growth;0.0340681345428556!GO:0031970;organelle envelope lumen;0.0341619259749121!GO:0007041;lysosomal transport;0.0341628711804583!GO:0017134;fibroblast growth factor binding;0.0346897918402792!GO:0043631;RNA polyadenylation;0.0351148650577043!GO:0006564;L-serine biosynthetic process;0.035455050389955!GO:0000118;histone deacetylase complex;0.0355780079329166!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0356112064145445!GO:0005784;translocon complex;0.0360060441295716!GO:0031902;late endosome membrane;0.0362035396348701!GO:0000152;nuclear ubiquitin ligase complex;0.0362428482183189!GO:0004722;protein serine/threonine phosphatase activity;0.0362428482183189!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0366154177124032!GO:0045039;protein import into mitochondrial inner membrane;0.0366154177124032!GO:0030127;COPII vesicle coat;0.0369734080062699!GO:0012507;ER to Golgi transport vesicle membrane;0.0369734080062699!GO:0009303;rRNA transcription;0.0370404402225056!GO:0031529;ruffle organization and biogenesis;0.0370871288907532!GO:0000139;Golgi membrane;0.037117919252462!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0371294179695158!GO:0030659;cytoplasmic vesicle membrane;0.0381862162749244!GO:0051297;centrosome organization and biogenesis;0.0382905376418755!GO:0031023;microtubule organizing center organization and biogenesis;0.0382905376418755!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0387409777302979!GO:0006509;membrane protein ectodomain proteolysis;0.0388530445726978!GO:0033619;membrane protein proteolysis;0.0388530445726978!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.038974531194978!GO:0003923;GPI-anchor transamidase activity;0.038974531194978!GO:0016255;attachment of GPI anchor to protein;0.038974531194978!GO:0042765;GPI-anchor transamidase complex;0.038974531194978!GO:0008629;induction of apoptosis by intracellular signals;0.0392123544284923!GO:0031625;ubiquitin protein ligase binding;0.039757178710386!GO:0000123;histone acetyltransferase complex;0.039757178710386!GO:0006984;ER-nuclear signaling pathway;0.039757178710386!GO:0032405;MutLalpha complex binding;0.0399351951289095!GO:0040008;regulation of growth;0.0399351951289095!GO:0030119;AP-type membrane coat adaptor complex;0.0402104554095111!GO:0016791;phosphoric monoester hydrolase activity;0.0402163793036017!GO:0000209;protein polyubiquitination;0.0405187430551982!GO:0004520;endodeoxyribonuclease activity;0.0409700303433807!GO:0006739;NADP metabolic process;0.0414075414092653!GO:0046128;purine ribonucleoside metabolic process;0.0417353894762688!GO:0042278;purine nucleoside metabolic process;0.0417353894762688!GO:0006379;mRNA cleavage;0.0421379414072293!GO:0030131;clathrin adaptor complex;0.0422739256309884!GO:0009067;aspartate family amino acid biosynthetic process;0.0425411451887112!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0435514431303533!GO:0006278;RNA-dependent DNA replication;0.0435650498154962!GO:0006904;vesicle docking during exocytosis;0.0436681160667342!GO:0042326;negative regulation of phosphorylation;0.0438425124492702!GO:0006220;pyrimidine nucleotide metabolic process;0.0438693952270041!GO:0051098;regulation of binding;0.0438693952270041!GO:0045502;dynein binding;0.044169220192709!GO:0046519;sphingoid metabolic process;0.044169220192709!GO:0015036;disulfide oxidoreductase activity;0.044169220192709!GO:0000030;mannosyltransferase activity;0.044213355634437!GO:0008426;protein kinase C inhibitor activity;0.0447440147009097!GO:0006778;porphyrin metabolic process;0.0448930346234004!GO:0033013;tetrapyrrole metabolic process;0.0448930346234004!GO:0009113;purine base biosynthetic process;0.0457267723058599!GO:0051318;G1 phase;0.0458857784555101!GO:0006779;porphyrin biosynthetic process;0.0460174831436629!GO:0033014;tetrapyrrole biosynthetic process;0.0460174831436629!GO:0009066;aspartate family amino acid metabolic process;0.0460383836940055!GO:0045859;regulation of protein kinase activity;0.0460383836940055!GO:0044262;cellular carbohydrate metabolic process;0.046095326874228!GO:0043154;negative regulation of caspase activity;0.046838789319009!GO:0000303;response to superoxide;0.046951392079438!GO:0031903;microbody membrane;0.0469676110325722!GO:0005778;peroxisomal membrane;0.0469676110325722!GO:0031371;ubiquitin conjugating enzyme complex;0.0469676110325722!GO:0050811;GABA receptor binding;0.0473687002692143!GO:0004087;carbamoyl-phosphate synthase (ammonia) activity;0.0476658217962262!GO:0032404;mismatch repair complex binding;0.0478352211104473!GO:0008537;proteasome activator complex;0.0481528043884558!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0484120719692638!GO:0001836;release of cytochrome c from mitochondria;0.048659087526453!GO:0000731;DNA synthesis during DNA repair;0.04893380206161!GO:0030125;clathrin vesicle coat;0.0495954514350779!GO:0030665;clathrin coated vesicle membrane;0.0495954514350779
|sample_id=10816
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=cervix
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10816-111B6;search_select_hide=table117:FF:10816-111B6
}}
}}

Latest revision as of 15:06, 3 June 2020

Name:epitheloid carcinoma cell line: HelaS3 ENCODE, biol_rep2
Species:Human (Homo sapiens)
Library ID:CNhs12326
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuecervix
dev stageNA
sexfemale
ageNA
cell typeepithelial cell
cell lineHelaS3
companyNA
collaborationCarrie Davis (Cold spring Harbor Laboratories)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005737
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12326 CAGE DRX007883 DRR008755
Accession ID Hg19

Library idBAMCTSS
CNhs12326 DRZ000180 DRZ001565
Accession ID Hg38

Library idBAMCTSS
CNhs12326 DRZ011530 DRZ012915
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0593
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0.351
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.66
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0.681
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.00756
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.11
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0.0306
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.098
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0796
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.0593
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0593
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.689
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.00215
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0306
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.00368
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0252
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.573
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0.0593
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12326

Jaspar motifP-value
MA0002.20.00359
MA0003.10.198
MA0004.10.234
MA0006.10.69
MA0007.10.516
MA0009.10.239
MA0014.10.988
MA0017.10.924
MA0018.20.125
MA0019.10.604
MA0024.11.71968e-7
MA0025.10.347
MA0027.10.775
MA0028.11.48236e-7
MA0029.10.00782
MA0030.10.0553
MA0031.10.1
MA0035.20.00664
MA0038.10.0475
MA0039.20.0355
MA0040.10.594
MA0041.10.834
MA0042.10.982
MA0043.10.202
MA0046.10.402
MA0047.20.571
MA0048.10.00436
MA0050.10.179
MA0051.10.667
MA0052.10.00416
MA0055.15.09693e-4
MA0057.10.884
MA0058.10.0896
MA0059.10.224
MA0060.12.44512e-16
MA0061.10.0247
MA0062.24.61386e-6
MA0065.20.175
MA0066.10.176
MA0067.10.506
MA0068.10.342
MA0069.10.833
MA0070.10.0694
MA0071.10.399
MA0072.10.117
MA0073.10.299
MA0074.10.86
MA0076.15.60663e-7
MA0077.10.994
MA0078.10.172
MA0079.20.805
MA0080.22.27289e-7
MA0081.10.413
MA0083.10.013
MA0084.10.806
MA0087.10.818
MA0088.10.0121
MA0090.10.363
MA0091.10.0214
MA0092.10.266
MA0093.10.154
MA0099.20.139
MA0100.10.314
MA0101.10.452
MA0102.20.0948
MA0103.10.468
MA0104.20.00846
MA0105.10.064
MA0106.10.566
MA0107.10.157
MA0108.20.935
MA0111.10.832
MA0112.20.245
MA0113.10.592
MA0114.10.156
MA0115.10.0105
MA0116.10.589
MA0117.10.673
MA0119.10.731
MA0122.10.345
MA0124.10.889
MA0125.10.344
MA0131.10.0475
MA0135.10.339
MA0136.10.0293
MA0137.20.624
MA0138.20.0107
MA0139.10.77
MA0140.19.02818e-4
MA0141.10.289
MA0142.10.992
MA0143.10.0973
MA0144.10.542
MA0145.10.475
MA0146.10.351
MA0147.10.0135
MA0148.10.448
MA0149.10.0649
MA0150.10.585
MA0152.10.523
MA0153.10.736
MA0154.10.0495
MA0155.10.023
MA0156.10.44
MA0157.10.342
MA0159.10.819
MA0160.10.236
MA0162.10.299
MA0163.10.645
MA0164.10.737
MA0258.10.349
MA0259.10.124



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12326

Novel motifP-value
10.561
100.127
1000.176
1010.805
1020.861
1030.0388
1040.969
1050.329
1060.00529
1070.0332
1080.222
1090.207
110.423
1100.6
1110.688
1120.00119
1130.0166
1140.511
1150.519
1160.916
1170.156
1180.649
1190.466
120.96
1200.741
1210.526
1220.505
1230.598
1240.494
1250.349
1260.805
1270.87
1280.00257
1290.373
130.001
1300.0217
1310.0958
1320.745
1330.305
1340.282
1350.057
1360.0358
1370.189
1380.544
1390.221
140.386
1400.714
1410.456
1420.389
1430.6
1440.489
1450.21
1460.518
1470.48
1480.711
1490.0298
150.56
1500.877
1510.649
1520.0594
1530.284
1540.726
1550.976
1560.565
1570.382
1580.188
1590.337
160.458
1600.418
1610.481
1620.6
1630.763
1640.947
1650.611
1660.254
1670.271
1680.547
1690.464
170.369
180.161
190.179
20.0976
200.0367
210.802
220.475
237.2037e-4
240.51
250.795
260.962
270.127
280.549
290.115
30.494
300.133
310.238
320.0364
330.491
340.146
350.575
360.277
370.942
380.976
390.636
40.39
400.283
410.237
420.862
430.334
440.73
450.297
460.313
470.91
480.972
490.653
50.339
500.918
510.242
520.143
530.361
540.398
550.0178
560.458
570.938
580.776
590.232
60.905
600.126
610.211
620.387
630.981
640.811
650.065
662.29854e-6
670.763
680.696
690.425
70.288
700.0591
710.376
720.484
730.399
740.557
750.16
760.366
770.349
780.485
790.329
80.833
800.0901
810.454
820.00758
830.473
840.427
850.0155
860.857
870.0743
880.704
890.0366
90.228
900.0552
910.0108
920.0319
930.896
940.156
950.219
960.143
970.691
980.953
990.931



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12326


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0011472 (human epitheloid carcinoma cell line: HelaS3 ENCODE sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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