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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=CAGE@SAMD00005636
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000792,CL:0000815,CL:0000827,CL:0000837,CL:0000838,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002677
|accession_numbers=CAGE;DRX008181;DRR009053;DRZ000478;DRZ001863;DRZ011828;DRZ013213
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
|comment=Changed from previous label. TODO: full classification
|comment=Changed from previous label. TODO: full classification
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
|expression_enrichment_score
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 41:
|fonse_treatment_closure=EFO:0000369,FF:0000409,FF:0011127,FF:11794-124C3
|fonse_treatment_closure=EFO:0000369,FF:0000409,FF:0011127,FF:11794-124C3
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13204.11794-124C3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13204.11794-124C3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13204.11794-124C3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13204.11794-124C3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25%252bCD45RA-%2520memory%2520regulatory%2520T%2520cells%2520expanded%252c%2520donor1.CNhs13204.11794-124C3.hg38.nobarcode.ctss.bed.gz
|id=FF:11794-124C3
|id=FF:11794-124C3
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_obsolete=
|library_id=CNhs13204
|library_id_phase_based=2:CNhs13204
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11794
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11794
|name=CD4+CD25+CD45RA- memory regulatory T cells expanded, donor1
|name=CD4+CD25+CD45RA- memory regulatory T cells expanded, donor1
|namespace=
|namespace=
Line 42: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs13204,LSID1004,release012,COMPLETED
|profile_hcage=CNhs13204,LSID1004,release012,COMPLETED
|profile_rnaseq=,,,
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|profile_srnaseq=,,,
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=124
|rna_box=124
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|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=2.6264
|rna_weight_ug=2.6264
|sample_age=25
|sample_age=25
|sample_category=primary cells
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|sample_cell_catalog=
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|sample_cell_line=
Line 69: Line 91:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.58748383437507e-232!GO:0043227;membrane-bound organelle;3.31451761985055e-198!GO:0043231;intracellular membrane-bound organelle;9.87706779992597e-198!GO:0043226;organelle;4.95878891747521e-187!GO:0043229;intracellular organelle;2.70597874274279e-186!GO:0005737;cytoplasm;2.20634006823222e-153!GO:0044422;organelle part;4.19484073816594e-131!GO:0044446;intracellular organelle part;2.8905834715858e-129!GO:0044444;cytoplasmic part;2.96494647431402e-107!GO:0032991;macromolecular complex;5.79313169337576e-103!GO:0005634;nucleus;3.60848956253125e-97!GO:0044237;cellular metabolic process;2.75195490289887e-95!GO:0043170;macromolecule metabolic process;1.18875854855379e-94!GO:0044238;primary metabolic process;7.28069427771162e-92!GO:0030529;ribonucleoprotein complex;2.40932165977296e-85!GO:0003723;RNA binding;4.83136929686428e-77!GO:0044428;nuclear part;1.41693241566297e-76!GO:0043233;organelle lumen;1.13579089240801e-66!GO:0031974;membrane-enclosed lumen;1.13579089240801e-66!GO:0043283;biopolymer metabolic process;1.80794666850531e-62!GO:0005515;protein binding;1.82534136602021e-60!GO:0005739;mitochondrion;2.92793909994443e-57!GO:0006412;translation;1.86187993344062e-55!GO:0043234;protein complex;1.08885959037542e-52!GO:0019538;protein metabolic process;4.04935350060157e-52!GO:0033036;macromolecule localization;7.45847918317659e-51!GO:0006396;RNA processing;8.34776964575465e-50!GO:0010467;gene expression;1.26632885818829e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.514251001137e-49!GO:0015031;protein transport;3.45320285814159e-49!GO:0044267;cellular protein metabolic process;6.30949431963517e-49!GO:0005840;ribosome;2.55121837007389e-48!GO:0044260;cellular macromolecule metabolic process;4.66071011290401e-48!GO:0045184;establishment of protein localization;6.92384575791136e-48!GO:0008104;protein localization;2.12614373659093e-47!GO:0031981;nuclear lumen;1.7186190596291e-45!GO:0016071;mRNA metabolic process;9.75075769315818e-45!GO:0003735;structural constituent of ribosome;5.13245899187325e-43!GO:0009059;macromolecule biosynthetic process;4.25890085645789e-42!GO:0031090;organelle membrane;1.27028361742198e-41!GO:0044429;mitochondrial part;1.1665043274094e-40!GO:0006397;mRNA processing;1.23277508254778e-38!GO:0006259;DNA metabolic process;1.34730160589055e-38!GO:0031967;organelle envelope;1.58642014946682e-38!GO:0008380;RNA splicing;2.866237875254e-38!GO:0031975;envelope;3.6245395599295e-38!GO:0033279;ribosomal subunit;4.19872962157087e-37!GO:0005829;cytosol;8.06480595979705e-36!GO:0046907;intracellular transport;1.4134005850895e-35!GO:0016043;cellular component organization and biogenesis;8.88906753652248e-35!GO:0009058;biosynthetic process;8.91885736253293e-34!GO:0003676;nucleic acid binding;8.91885736253293e-34!GO:0044249;cellular biosynthetic process;1.42232839058333e-33!GO:0006886;intracellular protein transport;3.3546776233787e-33!GO:0065003;macromolecular complex assembly;1.44511263170895e-31!GO:0005654;nucleoplasm;4.07371027712272e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.40548062439186e-29!GO:0005681;spliceosome;6.02904302715871e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.46533483278732e-28!GO:0006996;organelle organization and biogenesis;4.03423710901177e-28!GO:0022607;cellular component assembly;2.20462273301458e-27!GO:0000166;nucleotide binding;3.64796729983993e-27!GO:0051641;cellular localization;6.63005930453675e-27!GO:0051649;establishment of cellular localization;1.31710141197338e-26!GO:0005740;mitochondrial envelope;2.55684975855514e-26!GO:0043228;non-membrane-bound organelle;1.17546645715723e-25!GO:0043232;intracellular non-membrane-bound organelle;1.17546645715723e-25!GO:0007049;cell cycle;3.61749428731896e-25!GO:0044445;cytosolic part;4.23049161862884e-25!GO:0031966;mitochondrial membrane;6.38587895475034e-25!GO:0006915;apoptosis;1.73746996920507e-24!GO:0012501;programmed cell death;1.8347718837617e-24!GO:0019866;organelle inner membrane;2.1569050256005e-24!GO:0008219;cell death;9.95770114184183e-24!GO:0016265;death;9.95770114184183e-24!GO:0016070;RNA metabolic process;1.0093972145e-23!GO:0006512;ubiquitin cycle;1.26906088147452e-23!GO:0044451;nucleoplasm part;6.7437849118277e-23!GO:0006974;response to DNA damage stimulus;8.83601537990258e-23!GO:0005743;mitochondrial inner membrane;5.97715602874856e-22!GO:0006119;oxidative phosphorylation;7.35533206003412e-21!GO:0022618;protein-RNA complex assembly;2.2291150620671e-20!GO:0032553;ribonucleotide binding;2.42510259523747e-20!GO:0032555;purine ribonucleotide binding;2.42510259523747e-20!GO:0005694;chromosome;3.06864906172427e-20!GO:0022402;cell cycle process;3.17030125123368e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.71702251232066e-20!GO:0043412;biopolymer modification;5.25586746865316e-20!GO:0016462;pyrophosphatase activity;5.47952805638182e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;5.47952805638182e-20!GO:0017076;purine nucleotide binding;8.95802968513114e-20!GO:0017111;nucleoside-triphosphatase activity;1.12338630463075e-19!GO:0051276;chromosome organization and biogenesis;2.42049955130034e-19!GO:0006281;DNA repair;3.04332513003245e-19!GO:0015935;small ribosomal subunit;4.7722977972444e-19!GO:0015934;large ribosomal subunit;5.79882704646084e-19!GO:0044427;chromosomal part;7.09812349033324e-19!GO:0044265;cellular macromolecule catabolic process;1.30135932624969e-18!GO:0044455;mitochondrial membrane part;2.05282251265432e-18!GO:0016874;ligase activity;2.10826831558682e-18!GO:0006464;protein modification process;1.14175615100347e-17!GO:0031980;mitochondrial lumen;3.51046604310945e-17!GO:0005759;mitochondrial matrix;3.51046604310945e-17!GO:0005524;ATP binding;3.78759029912974e-17!GO:0042981;regulation of apoptosis;4.66738655286444e-17!GO:0043067;regulation of programmed cell death;8.3463643869594e-17!GO:0012505;endomembrane system;1.18471154951954e-16!GO:0000502;proteasome complex (sensu Eukaryota);1.94719079466606e-16!GO:0008135;translation factor activity, nucleic acid binding;1.98516265320359e-16!GO:0032559;adenyl ribonucleotide binding;1.99443839298151e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.46603948493308e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;2.77520983663706e-16!GO:0006605;protein targeting;2.84510621402987e-16!GO:0019941;modification-dependent protein catabolic process;3.15323725712426e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.15323725712426e-16!GO:0043687;post-translational protein modification;5.21504378317112e-16!GO:0008134;transcription factor binding;5.46379914233613e-16!GO:0006511;ubiquitin-dependent protein catabolic process;6.32301544544327e-16!GO:0044257;cellular protein catabolic process;7.20034730090907e-16!GO:0043285;biopolymer catabolic process;7.69961676211459e-16!GO:0030554;adenyl nucleotide binding;9.47866361223565e-16!GO:0006457;protein folding;1.2349261154846e-15!GO:0005730;nucleolus;1.25424954351552e-15!GO:0000278;mitotic cell cycle;1.25612916812116e-15!GO:0006323;DNA packaging;1.32332253622527e-15!GO:0016604;nuclear body;2.01593404899408e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.73335471694611e-15!GO:0009057;macromolecule catabolic process;3.9182689623232e-15!GO:0005746;mitochondrial respiratory chain;3.98477920288093e-15!GO:0048770;pigment granule;7.67972120859008e-15!GO:0042470;melanosome;7.67972120859008e-15!GO:0006913;nucleocytoplasmic transport;1.42951510359173e-14!GO:0042623;ATPase activity, coupled;1.42951510359173e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.0766170972507e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.15507886285857e-14!GO:0051169;nuclear transport;2.87168083477267e-14!GO:0016887;ATPase activity;3.00392189850211e-14!GO:0050136;NADH dehydrogenase (quinone) activity;5.04442042367077e-14!GO:0003954;NADH dehydrogenase activity;5.04442042367077e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.04442042367077e-14!GO:0009719;response to endogenous stimulus;6.95695184034807e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.11886297696427e-13!GO:0000375;RNA splicing, via transesterification reactions;1.11886297696427e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.11886297696427e-13!GO:0044248;cellular catabolic process;2.20860714458708e-13!GO:0065004;protein-DNA complex assembly;2.64638292463539e-13!GO:0006413;translational initiation;2.94698505830181e-13!GO:0006333;chromatin assembly or disassembly;4.15404126790127e-13!GO:0005635;nuclear envelope;4.50521504117642e-13!GO:0000087;M phase of mitotic cell cycle;4.561840221918e-13!GO:0003743;translation initiation factor activity;5.06651954973881e-13!GO:0051726;regulation of cell cycle;6.29663414290419e-13!GO:0007067;mitosis;7.66152542974634e-13!GO:0022403;cell cycle phase;7.89812465279376e-13!GO:0000074;regulation of progression through cell cycle;1.05411703521063e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.22528677564206e-12!GO:0042773;ATP synthesis coupled electron transport;1.22528677564206e-12!GO:0005761;mitochondrial ribosome;1.54551580956777e-12!GO:0000313;organellar ribosome;1.54551580956777e-12!GO:0000785;chromatin;1.71171799861496e-12!GO:0030163;protein catabolic process;1.90426279515786e-12!GO:0016607;nuclear speck;2.72759593876224e-12!GO:0030964;NADH dehydrogenase complex (quinone);4.12755783951297e-12!GO:0045271;respiratory chain complex I;4.12755783951297e-12!GO:0005747;mitochondrial respiratory chain complex I;4.12755783951297e-12!GO:0050794;regulation of cellular process;5.08333546607292e-12!GO:0031965;nuclear membrane;6.68753976522048e-12!GO:0048193;Golgi vesicle transport;1.14941209363465e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.24194994048268e-11!GO:0006446;regulation of translational initiation;1.90684030610161e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.75054755670545e-11!GO:0051301;cell division;2.78627145100048e-11!GO:0006793;phosphorus metabolic process;3.43490898221485e-11!GO:0006796;phosphate metabolic process;3.43490898221485e-11!GO:0051082;unfolded protein binding;3.54760475485426e-11!GO:0005794;Golgi apparatus;4.26111244796581e-11!GO:0004386;helicase activity;4.31926083031578e-11!GO:0044432;endoplasmic reticulum part;6.01521638138159e-11!GO:0000279;M phase;6.45995333960291e-11!GO:0005783;endoplasmic reticulum;7.4615933370578e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.38493927339568e-11!GO:0044453;nuclear membrane part;1.56883870523036e-10!GO:0008639;small protein conjugating enzyme activity;1.6857829637636e-10!GO:0006334;nucleosome assembly;1.7466572962118e-10!GO:0051186;cofactor metabolic process;1.80056452727168e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.53326859137449e-10!GO:0019787;small conjugating protein ligase activity;2.65727449436639e-10!GO:0042254;ribosome biogenesis and assembly;3.10172735265437e-10!GO:0004842;ubiquitin-protein ligase activity;3.17112881067358e-10!GO:0017038;protein import;3.35716899676293e-10!GO:0051246;regulation of protein metabolic process;3.43889999577485e-10!GO:0008026;ATP-dependent helicase activity;3.62466962851027e-10!GO:0016568;chromatin modification;4.66499553722944e-10!GO:0006260;DNA replication;4.76528893400559e-10!GO:0031497;chromatin assembly;5.92889942782316e-10!GO:0016192;vesicle-mediated transport;8.56151384505447e-10!GO:0016787;hydrolase activity;1.14468591830488e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.14592373226977e-09!GO:0043069;negative regulation of programmed cell death;1.17000128981993e-09!GO:0006916;anti-apoptosis;1.50874492536744e-09!GO:0043066;negative regulation of apoptosis;1.67468806825868e-09!GO:0003712;transcription cofactor activity;1.74674926885537e-09!GO:0007243;protein kinase cascade;1.83035576716745e-09!GO:0016310;phosphorylation;2.01335529178816e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.19991378088343e-09!GO:0019829;cation-transporting ATPase activity;2.44873160160531e-09!GO:0008565;protein transporter activity;2.79054941449175e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.93133540501883e-09!GO:0043566;structure-specific DNA binding;2.98751249964413e-09!GO:0005789;endoplasmic reticulum membrane;3.22364823154883e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.57610040715323e-09!GO:0009259;ribonucleotide metabolic process;7.58754547987986e-09!GO:0005643;nuclear pore;9.49923637886978e-09!GO:0050657;nucleic acid transport;1.08803174864919e-08!GO:0051236;establishment of RNA localization;1.08803174864919e-08!GO:0050658;RNA transport;1.08803174864919e-08!GO:0006403;RNA localization;1.24974390242111e-08!GO:0006917;induction of apoptosis;1.3802425660742e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.45881107354845e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.73855977393636e-08!GO:0016881;acid-amino acid ligase activity;1.77631824347383e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.00778932741958e-08!GO:0012502;induction of programmed cell death;2.40813802891281e-08!GO:0048523;negative regulation of cellular process;2.40813802891281e-08!GO:0006164;purine nucleotide biosynthetic process;2.63082105487384e-08!GO:0006163;purine nucleotide metabolic process;2.7608614675821e-08!GO:0009260;ribonucleotide biosynthetic process;2.91344436551341e-08!GO:0003697;single-stranded DNA binding;3.78689338124923e-08!GO:0005768;endosome;3.97844822789097e-08!GO:0006732;coenzyme metabolic process;4.36256269041549e-08!GO:0009055;electron carrier activity;5.33924290093556e-08!GO:0043065;positive regulation of apoptosis;5.71675129645913e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.20691464445217e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.45003061111468e-08!GO:0051170;nuclear import;6.52887572797295e-08!GO:0065002;intracellular protein transport across a membrane;6.52887572797295e-08!GO:0065009;regulation of a molecular function;6.64922798226025e-08!GO:0009150;purine ribonucleotide metabolic process;6.76431469405069e-08!GO:0006399;tRNA metabolic process;7.51306906580376e-08!GO:0004298;threonine endopeptidase activity;7.89755278012462e-08!GO:0043068;positive regulation of programmed cell death;8.86220642346472e-08!GO:0015986;ATP synthesis coupled proton transport;9.99741056728462e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.99741056728462e-08!GO:0019222;regulation of metabolic process;1.05454794002466e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.24872528153163e-07!GO:0006606;protein import into nucleus;1.29171779480915e-07!GO:0050789;regulation of biological process;1.46798951669193e-07!GO:0016740;transferase activity;2.09590757596944e-07!GO:0032446;protein modification by small protein conjugation;2.19699858682396e-07!GO:0046930;pore complex;2.3928713600968e-07!GO:0048519;negative regulation of biological process;2.96936122814141e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.13806795478969e-07!GO:0009056;catabolic process;3.1539143076199e-07!GO:0000786;nucleosome;3.22888461565799e-07!GO:0051028;mRNA transport;3.88999887133346e-07!GO:0048522;positive regulation of cellular process;4.80779236987174e-07!GO:0016567;protein ubiquitination;5.56186491410046e-07!GO:0019899;enzyme binding;5.65167654657197e-07!GO:0048475;coated membrane;5.70836092373049e-07!GO:0030117;membrane coat;5.70836092373049e-07!GO:0007242;intracellular signaling cascade;6.32741953909498e-07!GO:0051188;cofactor biosynthetic process;6.54293469332613e-07!GO:0016779;nucleotidyltransferase activity;6.66527953174566e-07!GO:0009060;aerobic respiration;6.69582611303942e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.01054648789328e-07!GO:0006754;ATP biosynthetic process;8.26993588309252e-07!GO:0006753;nucleoside phosphate metabolic process;8.26993588309252e-07!GO:0006366;transcription from RNA polymerase II promoter;8.47713824996598e-07!GO:0000245;spliceosome assembly;1.02012299729464e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.02203091411903e-06!GO:0003713;transcription coactivator activity;1.0490721737207e-06!GO:0016072;rRNA metabolic process;1.14433407933172e-06!GO:0030120;vesicle coat;1.14438330043421e-06!GO:0030662;coated vesicle membrane;1.14438330043421e-06!GO:0031324;negative regulation of cellular metabolic process;1.19877129143481e-06!GO:0005813;centrosome;1.27383936462246e-06!GO:0006310;DNA recombination;1.29755205155569e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.34615623789855e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.34615623789855e-06!GO:0016563;transcription activator activity;1.38408457987912e-06!GO:0006364;rRNA processing;1.4046800605781e-06!GO:0005793;ER-Golgi intermediate compartment;1.4046800605781e-06!GO:0005773;vacuole;1.51965756100459e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.69454354608599e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.69454354608599e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.26818513159083e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.26818513159083e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.26818513159083e-06!GO:0005815;microtubule organizing center;2.31523826905312e-06!GO:0008632;apoptotic program;2.4325255187137e-06!GO:0045786;negative regulation of progression through cell cycle;2.52331311688832e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.59235297910475e-06!GO:0046034;ATP metabolic process;2.7415651168166e-06!GO:0015630;microtubule cytoskeleton;2.81426878450208e-06!GO:0000323;lytic vacuole;2.84244536062004e-06!GO:0005764;lysosome;2.84244536062004e-06!GO:0009141;nucleoside triphosphate metabolic process;2.99380771669841e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.99380771669841e-06!GO:0006417;regulation of translation;3.16203695312646e-06!GO:0006613;cotranslational protein targeting to membrane;3.16203695312646e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.25537906684496e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.25537906684496e-06!GO:0043038;amino acid activation;3.35913114897356e-06!GO:0006418;tRNA aminoacylation for protein translation;3.35913114897356e-06!GO:0043039;tRNA aminoacylation;3.35913114897356e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.94397348200584e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.1317887372211e-06!GO:0015399;primary active transmembrane transporter activity;4.1317887372211e-06!GO:0031323;regulation of cellular metabolic process;4.18470747155825e-06!GO:0045259;proton-transporting ATP synthase complex;4.3728675414718e-06!GO:0045333;cellular respiration;4.69683555119625e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.48095191981302e-06!GO:0005525;GTP binding;6.81412329782952e-06!GO:0006461;protein complex assembly;8.99872750650857e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.47336396573929e-06!GO:0009892;negative regulation of metabolic process;9.94759663044688e-06!GO:0016564;transcription repressor activity;1.0631875572508e-05!GO:0007005;mitochondrion organization and biogenesis;1.09923020730278e-05!GO:0000151;ubiquitin ligase complex;1.11894780105721e-05!GO:0051168;nuclear export;1.52417534471071e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.58854598040451e-05!GO:0006612;protein targeting to membrane;1.78692496062172e-05!GO:0004674;protein serine/threonine kinase activity;1.95158425355477e-05!GO:0003724;RNA helicase activity;2.17428426858478e-05!GO:0009108;coenzyme biosynthetic process;2.2278578750715e-05!GO:0005819;spindle;2.30500722429258e-05!GO:0042110;T cell activation;2.85945966135609e-05!GO:0003690;double-stranded DNA binding;2.96884695193993e-05!GO:0005770;late endosome;3.24225329954283e-05!GO:0006099;tricarboxylic acid cycle;3.27823478338675e-05!GO:0046356;acetyl-CoA catabolic process;3.27823478338675e-05!GO:0031326;regulation of cellular biosynthetic process;3.36981551894848e-05!GO:0006752;group transfer coenzyme metabolic process;3.47894010481873e-05!GO:0006401;RNA catabolic process;3.70365400244782e-05!GO:0006261;DNA-dependent DNA replication;4.2594691663998e-05!GO:0016363;nuclear matrix;4.32097408785514e-05!GO:0003924;GTPase activity;4.36365429853202e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.65890293595694e-05!GO:0044431;Golgi apparatus part;5.08546561340214e-05!GO:0009967;positive regulation of signal transduction;5.39350232585232e-05!GO:0000075;cell cycle checkpoint;5.70214902617396e-05!GO:0005798;Golgi-associated vesicle;6.38182496089564e-05!GO:0048518;positive regulation of biological process;6.51783181310447e-05!GO:0043492;ATPase activity, coupled to movement of substances;7.22144208173605e-05!GO:0050790;regulation of catalytic activity;7.35081253352561e-05!GO:0005762;mitochondrial large ribosomal subunit;7.42216599475191e-05!GO:0000315;organellar large ribosomal subunit;7.42216599475191e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;8.22053261762903e-05!GO:0065007;biological regulation;8.51038599301196e-05!GO:0006084;acetyl-CoA metabolic process;8.65035430443949e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;8.73449091746097e-05!GO:0032561;guanyl ribonucleotide binding;9.2113944735171e-05!GO:0019001;guanyl nucleotide binding;9.2113944735171e-05!GO:0008234;cysteine-type peptidase activity;9.55518468535801e-05!GO:0006350;transcription;9.72467366650149e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000104479950154493!GO:0006402;mRNA catabolic process;0.000109518645106057!GO:0000775;chromosome, pericentric region;0.000121677924257856!GO:0044440;endosomal part;0.000127798411719344!GO:0010008;endosome membrane;0.000127798411719344!GO:0005885;Arp2/3 protein complex;0.000154690713398022!GO:0009117;nucleotide metabolic process;0.000178067485987644!GO:0051427;hormone receptor binding;0.000186979455085143!GO:0009615;response to virus;0.000195334620417315!GO:0016481;negative regulation of transcription;0.000198596870943629!GO:0043021;ribonucleoprotein binding;0.000198596870943629!GO:0043623;cellular protein complex assembly;0.000221661753831373!GO:0051187;cofactor catabolic process;0.000237716135341551!GO:0008654;phospholipid biosynthetic process;0.000242613212548059!GO:0009109;coenzyme catabolic process;0.000249657618676332!GO:0010468;regulation of gene expression;0.000252070810350849!GO:0030384;phosphoinositide metabolic process;0.000283037034443553!GO:0019843;rRNA binding;0.000297680817505265!GO:0015992;proton transport;0.00029908606905891!GO:0005667;transcription factor complex;0.000314877567703787!GO:0008186;RNA-dependent ATPase activity;0.000316684993531657!GO:0006818;hydrogen transport;0.000331960268810005!GO:0006302;double-strand break repair;0.000367656599646128!GO:0035257;nuclear hormone receptor binding;0.000373609731453759!GO:0006891;intra-Golgi vesicle-mediated transport;0.000381796885718503!GO:0009889;regulation of biosynthetic process;0.000386806695171524!GO:0007088;regulation of mitosis;0.000389674367296934!GO:0005657;replication fork;0.00041532032138798!GO:0051325;interphase;0.00050673837623965!GO:0003899;DNA-directed RNA polymerase activity;0.000510811262215047!GO:0006352;transcription initiation;0.000516045839817669!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000519498589006838!GO:0003729;mRNA binding;0.000584326961762273!GO:0006650;glycerophospholipid metabolic process;0.000598433462166546!GO:0046649;lymphocyte activation;0.000623898299259282!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000625580094468109!GO:0051329;interphase of mitotic cell cycle;0.000688799322589265!GO:0003678;DNA helicase activity;0.000691190338144958!GO:0003684;damaged DNA binding;0.000698020479818956!GO:0001772;immunological synapse;0.000708094094712118!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000712237886273693!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000723046399656742!GO:0007264;small GTPase mediated signal transduction;0.000754100241577181!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000794124275515103!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000819580095047656!GO:0031982;vesicle;0.000835934811664978!GO:0051252;regulation of RNA metabolic process;0.000839534500274305!GO:0000139;Golgi membrane;0.000923025391721988!GO:0004004;ATP-dependent RNA helicase activity;0.000923025391721988!GO:0046489;phosphoinositide biosynthetic process;0.000964956647141944!GO:0042802;identical protein binding;0.000966245295211276!GO:0016853;isomerase activity;0.00100106023957436!GO:0030658;transport vesicle membrane;0.00101842501451108!GO:0008094;DNA-dependent ATPase activity;0.00103446109061466!GO:0060090;molecular adaptor activity;0.0010673316284393!GO:0000314;organellar small ribosomal subunit;0.00113428641460814!GO:0005763;mitochondrial small ribosomal subunit;0.00113428641460814!GO:0005741;mitochondrial outer membrane;0.00117932670122181!GO:0004518;nuclease activity;0.00118085379282611!GO:0048500;signal recognition particle;0.00119540519239334!GO:0006289;nucleotide-excision repair;0.00121066764170608!GO:0051249;regulation of lymphocyte activation;0.00125933932013152!GO:0022415;viral reproductive process;0.00128965788628933!GO:0007051;spindle organization and biogenesis;0.00129459518414008!GO:0019867;outer membrane;0.00132292339373535!GO:0048468;cell development;0.00136110746819055!GO:0050865;regulation of cell activation;0.00136110746819055!GO:0005637;nuclear inner membrane;0.00137125670857846!GO:0000776;kinetochore;0.00138019403793713!GO:0030118;clathrin coat;0.00139675599340772!GO:0005769;early endosome;0.0014078630063721!GO:0006414;translational elongation;0.00142242297946475!GO:0051251;positive regulation of lymphocyte activation;0.00151427906184235!GO:0051052;regulation of DNA metabolic process;0.00165157203495825!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0017129434459956!GO:0006383;transcription from RNA polymerase III promoter;0.00174212392997853!GO:0031968;organelle outer membrane;0.00177623006240424!GO:0008270;zinc ion binding;0.00179745135449915!GO:0006611;protein export from nucleus;0.00181480711144331!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0019307862774782!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0019307862774782!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0019307862774782!GO:0007006;mitochondrial membrane organization and biogenesis;0.00193611288706713!GO:0045454;cell redox homeostasis;0.002010159915397!GO:0046822;regulation of nucleocytoplasmic transport;0.002010159915397!GO:0030660;Golgi-associated vesicle membrane;0.00206283211242437!GO:0007093;mitotic cell cycle checkpoint;0.00208495265353954!GO:0008624;induction of apoptosis by extracellular signals;0.00216087047980554!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00217348548282087!GO:0045047;protein targeting to ER;0.00217348548282087!GO:0031988;membrane-bound vesicle;0.00219205606146161!GO:0046474;glycerophospholipid biosynthetic process;0.00220647156179002!GO:0050863;regulation of T cell activation;0.00230151664123642!GO:0003714;transcription corepressor activity;0.00235456184567125!GO:0043681;protein import into mitochondrion;0.00247854369722413!GO:0016251;general RNA polymerase II transcription factor activity;0.00249897895161956!GO:0016197;endosome transport;0.00249897895161956!GO:0031410;cytoplasmic vesicle;0.00271560998489812!GO:0051223;regulation of protein transport;0.00287028233563565!GO:0051092;activation of NF-kappaB transcription factor;0.00296068850869986!GO:0032940;secretion by cell;0.00299365268677128!GO:0008312;7S RNA binding;0.00299453864991152!GO:0005048;signal sequence binding;0.00300299408635084!GO:0031072;heat shock protein binding;0.00317256591212187!GO:0004527;exonuclease activity;0.00326192852587734!GO:0047485;protein N-terminus binding;0.00345513779097324!GO:0051087;chaperone binding;0.00350091927820033!GO:0000287;magnesium ion binding;0.00373712147906066!GO:0008637;apoptotic mitochondrial changes;0.00373712147906066!GO:0032774;RNA biosynthetic process;0.00380268515566027!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00380268515566027!GO:0007059;chromosome segregation;0.00382239864074091!GO:0003711;transcription elongation regulator activity;0.00385056255731947!GO:0008168;methyltransferase activity;0.00391111563130375!GO:0051789;response to protein stimulus;0.00409381455290643!GO:0006986;response to unfolded protein;0.00409381455290643!GO:0051090;regulation of transcription factor activity;0.00409381455290643!GO:0000209;protein polyubiquitination;0.00413256280820816!GO:0045321;leukocyte activation;0.00442456233839541!GO:0006338;chromatin remodeling;0.00443536585999457!GO:0051920;peroxiredoxin activity;0.00447084903243244!GO:0006351;transcription, DNA-dependent;0.00450044874403326!GO:0016741;transferase activity, transferring one-carbon groups;0.00461542474961454!GO:0031902;late endosome membrane;0.00461987087683845!GO:0019210;kinase inhibitor activity;0.00477643910150718!GO:0032259;methylation;0.00481039488022403!GO:0005774;vacuolar membrane;0.00518444443311095!GO:0043414;biopolymer methylation;0.00528550014430324!GO:0004177;aminopeptidase activity;0.00528622338004508!GO:0043488;regulation of mRNA stability;0.00539437128993192!GO:0043487;regulation of RNA stability;0.00539437128993192!GO:0007050;cell cycle arrest;0.00541496320075767!GO:0042101;T cell receptor complex;0.00545662773360884!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00546904396739573!GO:0016788;hydrolase activity, acting on ester bonds;0.0054886755280002!GO:0015631;tubulin binding;0.00550445955899685!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00553643205601484!GO:0005684;U2-dependent spliceosome;0.00558487583116882!GO:0031252;leading edge;0.00576821949676462!GO:0045045;secretory pathway;0.00576821949676462!GO:0016023;cytoplasmic membrane-bound vesicle;0.00583742734424506!GO:0004860;protein kinase inhibitor activity;0.00583742734424506!GO:0016859;cis-trans isomerase activity;0.00584639057524764!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.006025237675215!GO:0048471;perinuclear region of cytoplasm;0.00605572119906183!GO:0003746;translation elongation factor activity;0.00623905828522588!GO:0031124;mRNA 3'-end processing;0.00627909599143331!GO:0019901;protein kinase binding;0.00629854898477832!GO:0003677;DNA binding;0.00636135784980288!GO:0008033;tRNA processing;0.0063763540086594!GO:0046966;thyroid hormone receptor binding;0.00637650463128781!GO:0030518;steroid hormone receptor signaling pathway;0.00641325931584287!GO:0006091;generation of precursor metabolites and energy;0.00643721150754325!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00643721150754325!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00646090907834578!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00646090907834578!GO:0006607;NLS-bearing substrate import into nucleus;0.00662680621790748!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00674265260735004!GO:0004576;oligosaccharyl transferase activity;0.00681804390085953!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00686379858940775!GO:0016584;nucleosome positioning;0.00691757305507512!GO:0050870;positive regulation of T cell activation;0.00703279883185621!GO:0045076;regulation of interleukin-2 biosynthetic process;0.00703279883185621!GO:0051336;regulation of hydrolase activity;0.00713858287549378!GO:0045449;regulation of transcription;0.00721465459676812!GO:0003682;chromatin binding;0.00731798802450999!GO:0022890;inorganic cation transmembrane transporter activity;0.00732071708458687!GO:0008250;oligosaccharyl transferase complex;0.00753995278387681!GO:0005765;lysosomal membrane;0.00757876161004436!GO:0016791;phosphoric monoester hydrolase activity;0.00769457698813569!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0080380287541841!GO:0007265;Ras protein signal transduction;0.00826722905087439!GO:0032200;telomere organization and biogenesis;0.00827619142749789!GO:0000723;telomere maintenance;0.00827619142749789!GO:0009165;nucleotide biosynthetic process;0.00861071128956921!GO:0008047;enzyme activator activity;0.00873622021711565!GO:0030663;COPI coated vesicle membrane;0.0090476522889938!GO:0030126;COPI vesicle coat;0.0090476522889938!GO:0016301;kinase activity;0.00925207251742712!GO:0019079;viral genome replication;0.00928350913058667!GO:0006405;RNA export from nucleus;0.00931905083667356!GO:0022411;cellular component disassembly;0.00934826017465303!GO:0045892;negative regulation of transcription, DNA-dependent;0.00937276967860438!GO:0006950;response to stress;0.00944978906159917!GO:0051059;NF-kappaB binding;0.0097802003762821!GO:0051098;regulation of binding;0.0103162094278594!GO:0000049;tRNA binding;0.0103610773586302!GO:0000082;G1/S transition of mitotic cell cycle;0.0105574109663892!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0105574109663892!GO:0015002;heme-copper terminal oxidase activity;0.0105574109663892!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0105574109663892!GO:0004129;cytochrome-c oxidase activity;0.0105574109663892!GO:0008022;protein C-terminus binding;0.0105574109663892!GO:0019955;cytokine binding;0.0105614222119134!GO:0030137;COPI-coated vesicle;0.0105681186645476!GO:0004003;ATP-dependent DNA helicase activity;0.0105734452261462!GO:0007034;vacuolar transport;0.0106247268690189!GO:0044452;nucleolar part;0.0108703954227581!GO:0030119;AP-type membrane coat adaptor complex;0.0112045517960529!GO:0006914;autophagy;0.0112342622708941!GO:0051235;maintenance of localization;0.0112606058683142!GO:0030127;COPII vesicle coat;0.0113271978119089!GO:0012507;ER to Golgi transport vesicle membrane;0.0113271978119089!GO:0044437;vacuolar part;0.011335531034499!GO:0007052;mitotic spindle organization and biogenesis;0.0115101984355875!GO:0019783;small conjugating protein-specific protease activity;0.0115152784392219!GO:0006497;protein amino acid lipidation;0.0116705478662577!GO:0030521;androgen receptor signaling pathway;0.0117522226844841!GO:0016311;dephosphorylation;0.0118306008634555!GO:0007259;JAK-STAT cascade;0.0119413127643045!GO:0004843;ubiquitin-specific protease activity;0.0121108039376001!GO:0000339;RNA cap binding;0.0121671279592039!GO:0016605;PML body;0.0122104015730154!GO:0033116;ER-Golgi intermediate compartment membrane;0.0123634914587146!GO:0046467;membrane lipid biosynthetic process;0.0124074081995146!GO:0030867;rough endoplasmic reticulum membrane;0.012439522121424!GO:0016272;prefoldin complex;0.0124937083471372!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0126329823362053!GO:0005070;SH3/SH2 adaptor activity;0.0126381116505856!GO:0030134;ER to Golgi transport vesicle;0.0126843700091091!GO:0008139;nuclear localization sequence binding;0.0128645751536356!GO:0019900;kinase binding;0.0130876951883485!GO:0006007;glucose catabolic process;0.013094111963305!GO:0045069;regulation of viral genome replication;0.013094111963305!GO:0031123;RNA 3'-end processing;0.013094111963305!GO:0018196;peptidyl-asparagine modification;0.0131337414638627!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0131337414638627!GO:0046983;protein dimerization activity;0.0132608265462564!GO:0051539;4 iron, 4 sulfur cluster binding;0.0134129549001844!GO:0006284;base-excision repair;0.0135557992622334!GO:0043621;protein self-association;0.0135668311910721!GO:0018193;peptidyl-amino acid modification;0.0136327210961898!GO:0006506;GPI anchor biosynthetic process;0.0136336618614543!GO:0006376;mRNA splice site selection;0.0138270343002344!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0138270343002344!GO:0030176;integral to endoplasmic reticulum membrane;0.0145825723284075!GO:0030131;clathrin adaptor complex;0.0145871139866503!GO:0005869;dynactin complex;0.0147298835702147!GO:0042393;histone binding;0.014802308693699!GO:0033673;negative regulation of kinase activity;0.014802308693699!GO:0006469;negative regulation of protein kinase activity;0.014802308693699!GO:0006505;GPI anchor metabolic process;0.0150213133777726!GO:0048487;beta-tubulin binding;0.0155015719240218!GO:0042770;DNA damage response, signal transduction;0.0164246196700646!GO:0006839;mitochondrial transport;0.0165342096878647!GO:0042094;interleukin-2 biosynthetic process;0.016619176716984!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0175251235523135!GO:0005788;endoplasmic reticulum lumen;0.0175597617204817!GO:0030125;clathrin vesicle coat;0.0177050088771888!GO:0030665;clathrin coated vesicle membrane;0.0177050088771888!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0177141730867922!GO:0004221;ubiquitin thiolesterase activity;0.0177806396402421!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0179409094189319!GO:0001836;release of cytochrome c from mitochondria;0.0179872192590656!GO:0019058;viral infectious cycle;0.018065333875852!GO:0051881;regulation of mitochondrial membrane potential;0.0181384050044339!GO:0004197;cysteine-type endopeptidase activity;0.0184700613475035!GO:0005521;lamin binding;0.0185367220733439!GO:0000018;regulation of DNA recombination;0.0187307129686404!GO:0006626;protein targeting to mitochondrion;0.0187307129686404!GO:0051540;metal cluster binding;0.0189045575170215!GO:0051536;iron-sulfur cluster binding;0.0189045575170215!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0192455347865557!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0192455347865557!GO:0044438;microbody part;0.0193291156533993!GO:0044439;peroxisomal part;0.0193291156533993!GO:0030880;RNA polymerase complex;0.0194438776650244!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.019510023611218!GO:0030522;intracellular receptor-mediated signaling pathway;0.0197293401240446!GO:0051348;negative regulation of transferase activity;0.0201443212412712!GO:0015980;energy derivation by oxidation of organic compounds;0.020200888107283!GO:0000738;DNA catabolic process, exonucleolytic;0.0202749028326755!GO:0032508;DNA duplex unwinding;0.0203186881978546!GO:0032392;DNA geometric change;0.0203186881978546!GO:0043281;regulation of caspase activity;0.0206739853842323!GO:0043022;ribosome binding;0.0209568597144713!GO:0005669;transcription factor TFIID complex;0.0210774081256044!GO:0004722;protein serine/threonine phosphatase activity;0.0213691583651879!GO:0045936;negative regulation of phosphate metabolic process;0.0224080354774128!GO:0006378;mRNA polyadenylation;0.0226868318973772!GO:0004532;exoribonuclease activity;0.023223620926745!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.023223620926745!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0233079869008907!GO:0022406;membrane docking;0.0233451357564415!GO:0048278;vesicle docking;0.0233451357564415!GO:0040029;regulation of gene expression, epigenetic;0.0234740434722543!GO:0031625;ubiquitin protein ligase binding;0.0235314386674157!GO:0033367;protein localization in mast cell secretory granule;0.0237639127533547!GO:0033365;protein localization in organelle;0.0237639127533547!GO:0033371;T cell secretory granule organization and biogenesis;0.0237639127533547!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0237639127533547!GO:0033375;protease localization in T cell secretory granule;0.0237639127533547!GO:0042629;mast cell granule;0.0237639127533547!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0237639127533547!GO:0033364;mast cell secretory granule organization and biogenesis;0.0237639127533547!GO:0033380;granzyme B localization in T cell secretory granule;0.0237639127533547!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0237639127533547!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0237639127533547!GO:0033368;protease localization in mast cell secretory granule;0.0237639127533547!GO:0033366;protein localization in secretory granule;0.0237639127533547!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0237639127533547!GO:0033374;protein localization in T cell secretory granule;0.0237639127533547!GO:0030258;lipid modification;0.0240507559124406!GO:0030133;transport vesicle;0.0245968677226566!GO:0009116;nucleoside metabolic process;0.0247503007224186!GO:0004721;phosphoprotein phosphatase activity;0.0247921949374637!GO:0031903;microbody membrane;0.0247921949374637!GO:0005778;peroxisomal membrane;0.0247921949374637!GO:0030217;T cell differentiation;0.0249062126201333!GO:0008629;induction of apoptosis by intracellular signals;0.0251428230911171!GO:0000781;chromosome, telomeric region;0.0251428230911171!GO:0035258;steroid hormone receptor binding;0.0253046667301161!GO:0008287;protein serine/threonine phosphatase complex;0.0253046667301161!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0262214731067923!GO:0045792;negative regulation of cell size;0.0262930354525473!GO:0016790;thiolester hydrolase activity;0.0263139534590622!GO:0003988;acetyl-CoA C-acyltransferase activity;0.027039992466104!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0273420001462958!GO:0010257;NADH dehydrogenase complex assembly;0.0273420001462958!GO:0033108;mitochondrial respiratory chain complex assembly;0.0273420001462958!GO:0019976;interleukin-2 binding;0.0274436035129864!GO:0004911;interleukin-2 receptor activity;0.0274436035129864!GO:0006904;vesicle docking during exocytosis;0.0274939859240031!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0275430903781199!GO:0002440;production of molecular mediator of immune response;0.0275926609108378!GO:0006518;peptide metabolic process;0.0278132499177874!GO:0046483;heterocycle metabolic process;0.0281336024720008!GO:0008097;5S rRNA binding;0.0282191855678798!GO:0008408;3'-5' exonuclease activity;0.0287799527934108!GO:0050852;T cell receptor signaling pathway;0.02920836594206!GO:0051338;regulation of transferase activity;0.0292864328081306!GO:0042608;T cell receptor binding;0.0293093647950731!GO:0016860;intramolecular oxidoreductase activity;0.0293333467409873!GO:0042289;MHC class II protein binding;0.0293764330938151!GO:0046426;negative regulation of JAK-STAT cascade;0.0294077231602676!GO:0030695;GTPase regulator activity;0.0294584126897757!GO:0015923;mannosidase activity;0.0297316067192498!GO:0046914;transition metal ion binding;0.0298231680152435!GO:0050811;GABA receptor binding;0.0299264234779162!GO:0042158;lipoprotein biosynthetic process;0.0299330003528423!GO:0002521;leukocyte differentiation;0.0300192178309288!GO:0009124;nucleoside monophosphate biosynthetic process;0.0302555720305526!GO:0009123;nucleoside monophosphate metabolic process;0.0302555720305526!GO:0043433;negative regulation of transcription factor activity;0.0303674052166239!GO:0043596;nuclear replication fork;0.030614937691379!GO:0006144;purine base metabolic process;0.0308093478118824!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0311473377830229!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0311473377830229!GO:0019904;protein domain specific binding;0.0311473377830229!GO:0030308;negative regulation of cell growth;0.0311473377830229!GO:0030833;regulation of actin filament polymerization;0.031181246544721!GO:0009112;nucleobase metabolic process;0.0317187501013037!GO:0005095;GTPase inhibitor activity;0.0319155178905977!GO:0048524;positive regulation of viral reproduction;0.0323519297043276!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0325815856985981!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0325815856985981!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0325815856985981!GO:0005784;translocon complex;0.0327074580301011!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0327324060324574!GO:0000428;DNA-directed RNA polymerase complex;0.0327324060324574!GO:0006595;polyamine metabolic process;0.0328346580861415!GO:0048002;antigen processing and presentation of peptide antigen;0.0330117196745203!GO:0033157;regulation of intracellular protein transport;0.0330639605656882!GO:0042306;regulation of protein import into nucleus;0.0330639605656882!GO:0008320;protein transmembrane transporter activity;0.0334435520059096!GO:0016569;covalent chromatin modification;0.0336303346386785!GO:0005791;rough endoplasmic reticulum;0.0336370432882627!GO:0017134;fibroblast growth factor binding;0.0336370432882627!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0336370432882627!GO:0006778;porphyrin metabolic process;0.0341032300201711!GO:0033013;tetrapyrrole metabolic process;0.0341032300201711!GO:0000922;spindle pole;0.0341447731685834!GO:0006509;membrane protein ectodomain proteolysis;0.0342113102703553!GO:0033619;membrane protein proteolysis;0.0342113102703553!GO:0005996;monosaccharide metabolic process;0.0345860983095631!GO:0046365;monosaccharide catabolic process;0.0346319135598613!GO:0045185;maintenance of protein localization;0.0346473577670988!GO:0006465;signal peptide processing;0.0348607675513739!GO:0008538;proteasome activator activity;0.0348607675513739!GO:0019318;hexose metabolic process;0.0348607675513739!GO:0009966;regulation of signal transduction;0.0357421772521173!GO:0006672;ceramide metabolic process;0.0360348387408636!GO:0005832;chaperonin-containing T-complex;0.0362355096873821!GO:0006919;caspase activation;0.0365025515029823!GO:0006268;DNA unwinding during replication;0.0369347723452465!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0372012439191615!GO:0006487;protein amino acid N-linked glycosylation;0.0379093063023383!GO:0008017;microtubule binding;0.0379350912145791!GO:0006355;regulation of transcription, DNA-dependent;0.0381423178989756!GO:0046519;sphingoid metabolic process;0.0382007843809268!GO:0016763;transferase activity, transferring pentosyl groups;0.0384025946624756!GO:0007040;lysosome organization and biogenesis;0.0384025946624756!GO:0030132;clathrin coat of coated pit;0.0385300128398341!GO:0043549;regulation of kinase activity;0.0385937983763493!GO:0000228;nuclear chromosome;0.0386788512197871!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0389587980276529!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0390510813778008!GO:0003725;double-stranded RNA binding;0.0390510813778008!GO:0008213;protein amino acid alkylation;0.0391210304693426!GO:0006479;protein amino acid methylation;0.0391210304693426!GO:0005777;peroxisome;0.0391210304693426!GO:0042579;microbody;0.0391210304693426!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.039363417349829!GO:0019220;regulation of phosphate metabolic process;0.0395868493423815!GO:0051174;regulation of phosphorus metabolic process;0.0395868493423815!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0397285900753942!GO:0050792;regulation of viral reproduction;0.0397674370324919!GO:0022884;macromolecule transmembrane transporter activity;0.0397674370324919!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0397674370324919!GO:0008180;signalosome;0.0401961064200477!GO:0016408;C-acyltransferase activity;0.0401961064200477!GO:0000152;nuclear ubiquitin ligase complex;0.0403625776109038!GO:0051452;cellular pH reduction;0.0413521872854213!GO:0051453;regulation of cellular pH;0.0413521872854213!GO:0045851;pH reduction;0.0413521872854213!GO:0006458;'de novo' protein folding;0.0414497480273818!GO:0051084;'de novo' posttranslational protein folding;0.0414497480273818!GO:0000726;non-recombinational repair;0.041528789552627!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.041528789552627!GO:0006984;ER-nuclear signaling pathway;0.0416526342654407!GO:0009161;ribonucleoside monophosphate metabolic process;0.0420854393086995!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0420854393086995!GO:0046979;TAP2 binding;0.0423722646980179!GO:0046977;TAP binding;0.0423722646980179!GO:0046978;TAP1 binding;0.0423722646980179!GO:0016570;histone modification;0.0426053918863394!GO:0006779;porphyrin biosynthetic process;0.0426053918863394!GO:0033014;tetrapyrrole biosynthetic process;0.0426053918863394!GO:0007004;telomere maintenance via telomerase;0.0428593957763234!GO:0046982;protein heterodimerization activity;0.0429717242390975!GO:0042326;negative regulation of phosphorylation;0.0431907038482179!GO:0051287;NAD binding;0.0431907038482179!GO:0007021;tubulin folding;0.0434704293184707!GO:0005031;tumor necrosis factor receptor activity;0.0446062908933011!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0446386598969118!GO:0006013;mannose metabolic process;0.0447484160477944!GO:0005874;microtubule;0.0447484160477944!GO:0008276;protein methyltransferase activity;0.0448909342613238!GO:0007033;vacuole organization and biogenesis;0.0451985077748362!GO:0046164;alcohol catabolic process;0.0453906000493377!GO:0005083;small GTPase regulator activity;0.0454358363058693!GO:0002820;negative regulation of adaptive immune response;0.0455231273981892!GO:0002823;negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0455231273981892!GO:0005876;spindle microtubule;0.0456119572928959!GO:0002378;immunoglobulin biosynthetic process;0.0474080789177155!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0474080789177155!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0474080789177155!GO:0000059;protein import into nucleus, docking;0.0479998366717685!GO:0004659;prenyltransferase activity;0.048039083207835!GO:0045941;positive regulation of transcription;0.0482339558340997!GO:0031647;regulation of protein stability;0.048623925415511!GO:0043086;negative regulation of catalytic activity;0.0490391530667407!GO:0032507;maintenance of cellular protein localization;0.0490640895452369!GO:0000090;mitotic anaphase;0.0493627178802104!GO:0051322;anaphase;0.0493627178802104!GO:0008625;induction of apoptosis via death domain receptors;0.0493627178802104!GO:0016491;oxidoreductase activity;0.0499771880984487!GO:0042168;heme metabolic process;0.0499771880984487
|sample_id=11794
|sample_id=11794
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=ELF1,2,4:2.70713384353;RORA:2.3790926365;TLX2:2.37136343263;RUNX1..3:2.2800733944;PAX3,7:2.11491607954;CDX1,2,4:1.95886148893;ETS1,2:1.7268872553;CRX:1.52258056396;SPI1:1.40076504014;FOX{F1,F2,J1}:1.39435095178;DMAP1_NCOR{1,2}_SMARC:1.2772753079;IRF1,2:1.22431560527;STAT5{A,B}:1.12567238121;GATA6:1.12552215;ELK1,4_GABP{A,B1}:1.09435488405;ZBTB16:1.08004808937;NANOG{mouse}:1.04612546842;SPIB:1.01051905103;BPTF:0.946937194648;PDX1:0.942583235023;YY1:0.94010229007;HMX1:0.896414344318;FOX{D1,D2}:0.883233264108;PBX1:0.876542556336;POU1F1:0.829770328509;STAT1,3:0.81413132858;ATF5_CREB3:0.800048849244;RFX2..5_RFXANK_RFXAP:0.789287566592;PAX4:0.785126889358;NFATC1..3:0.783080390988;STAT2,4,6:0.772816617673;FOXO1,3,4:0.770020640301;POU2F1..3:0.734607132369;T:0.729701892903;CREB1:0.635567720363;TGIF1:0.635327841773;NKX2-2,8:0.611663915648;MYOD1:0.576061068118;E2F1..5:0.543664876304;NFY{A,B,C}:0.524999363808;NFKB1_REL_RELA:0.508435734117;AIRE:0.493332746208;FOXN1:0.490725993686;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.480761431929;IKZF2:0.47712280311;IRF7:0.455719273869;NKX6-1,2:0.437973987629;LEF1_TCF7_TCF7L1,2:0.388716020334;NKX3-1:0.383186791724;MYB:0.38100446227;SNAI1..3:0.379617690464;ZEB1:0.371748937082;PAX2:0.322155963005;BREu{core}:0.309105834576;LMO2:0.268039619035;SPZ1:0.242455314743;HES1:0.23039306157;NFE2L1:0.216252116423;SREBF1,2:0.213792859368;JUN:0.187845835436;FOXM1:0.181061009442;TAL1_TCF{3,4,12}:0.177351849465;CUX2:0.154456010828;FOXA2:0.151226067035;EP300:0.133216019506;NRF1:0.129049656752;PITX1..3:0.0536442136333;SOX5:0.0524078154072;PAX8:0.046409354952;NFIL3:0.0379633869198;FOXP3:0.0207841078289;ZNF423:0.00961277814015;ATF4:0.00612130073545;DBP:-0.0153211481582;ATF6:-0.0337927661533;ZNF143:-0.0681035400153;OCT4_SOX2{dimer}:-0.0697146193049;FOX{I1,J2}:-0.102274248222;FOXP1:-0.104911695683;GFI1:-0.112128508695;EVI1:-0.119249062881;GLI1..3:-0.121687145126;NR5A1,2:-0.13952724023;NFIX:-0.14970323709;ZNF148:-0.155655772952;ZNF384:-0.174518456938;RXRA_VDR{dimer}:-0.185850573085;SMAD1..7,9:-0.187830049609;HOX{A6,A7,B6,B7}:-0.247293709504;HNF4A_NR2F1,2:-0.252656709102;RFX1:-0.258655259757;GCM1,2:-0.259309052902;ATF2:-0.266157369761;MYFfamily:-0.271680661269;AHR_ARNT_ARNT2:-0.278419944683;SRF:-0.285101098452;FOXQ1:-0.318913731509;ALX1:-0.334102065826;ARID5B:-0.342955148748;BACH2:-0.378243737261;NFE2L2:-0.396003890289;FOSL2:-0.397133318305;AR:-0.40495069907;NFE2:-0.407643967502;MAFB:-0.41455495091;FOS_FOS{B,L1}_JUN{B,D}:-0.416220872546;PRRX1,2:-0.421626704854;TP53:-0.428522178157;CEBPA,B_DDIT3:-0.440486337273;ESRRA:-0.444390438425;HAND1,2:-0.466940191094;HNF1A:-0.47036218338;SOX2:-0.477746705711;TFCP2:-0.477986711238;HMGA1,2:-0.487176897971;HIF1A:-0.496543468992;NHLH1,2:-0.503876711095;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.506617742994;NR3C1:-0.521898693279;RREB1:-0.525718758987;ESR1:-0.533726536869;TFDP1:-0.594219713783;VSX1,2:-0.595435341592;HSF1,2:-0.629060474131;HOXA9_MEIS1:-0.641817955165;POU5F1:-0.659915250356;POU3F1..4:-0.673710406125;HLF:-0.702289557076;FOXD3:-0.717831502643;PAX5:-0.723105610862;UFEwm:-0.745210722415;NR1H4:-0.746663230442;TFAP4:-0.747317699355;ZNF238:-0.77279581334;NANOG:-0.787450613697;REST:-0.799064160171;ONECUT1,2:-0.802182713502;NKX2-1,4:-0.819470737093;NKX2-3_NKX2-5:-0.821084364365;PPARG:-0.829862977082;PAX6:-0.852830133155;ZBTB6:-0.856945195312;ALX4:-0.863863716103;SOX{8,9,10}:-0.866023293187;MYBL2:-0.880405903724;MED-1{core}:-0.896563594838;ADNP_IRX_SIX_ZHX:-0.951141404187;SOX17:-1.01474199561;TOPORS:-1.01568081592;MZF1:-1.03979913333;PRDM1:-1.04394068884;EBF1:-1.0493697009;HBP1_HMGB_SSRP1_UBTF:-1.05473330708;NR6A1:-1.06405306395;MEF2{A,B,C,D}:-1.09521947647;MAZ:-1.09707171024;bHLH_family:-1.1432213549;HOX{A5,B5}:-1.17960672024;LHX3,4:-1.20488907723;ZFP161:-1.21088917074;GFI1B:-1.21952407596;MTE{core}:-1.24570627687;EN1,2:-1.25490292658;TBX4,5:-1.26187467348;XCPE1{core}:-1.27072391187;RBPJ:-1.28920701282;GATA4:-1.29444561378;CDC5L:-1.30755232345;TBP:-1.32054133862;KLF4:-1.32717974825;GTF2I:-1.33085310485;EGR1..3:-1.37043959213;MTF1:-1.38975388752;PATZ1:-1.39455754166;ZIC1..3:-1.39473244735;GZF1:-1.41840587863;TFAP2{A,C}:-1.51875361164;HIC1:-1.53840531412;TEF:-1.54709985557;TFAP2B:-1.58211329162;GTF2A1,2:-1.62624911048;PAX1,9:-1.63404276433;TEAD1:-1.67699438858;RXR{A,B,G}:-1.69331628058;HOX{A4,D4}:-1.73793308346;NKX3-2:-1.77860980845;TLX1..3_NFIC{dimer}:-1.78027292441;SP1:-1.839077032;IKZF1:-1.95689604558;POU6F1:-2.02298144661;XBP1:-2.02630679428;FOXL1:-2.20002231064
|top_motifs=ELF1,2,4:2.70713384353;RORA:2.3790926365;TLX2:2.37136343263;RUNX1..3:2.2800733944;PAX3,7:2.11491607954;CDX1,2,4:1.95886148893;ETS1,2:1.7268872553;CRX:1.52258056396;SPI1:1.40076504014;FOX{F1,F2,J1}:1.39435095178;DMAP1_NCOR{1,2}_SMARC:1.2772753079;IRF1,2:1.22431560527;STAT5{A,B}:1.12567238121;GATA6:1.12552215;ELK1,4_GABP{A,B1}:1.09435488405;ZBTB16:1.08004808937;NANOG{mouse}:1.04612546842;SPIB:1.01051905103;BPTF:0.946937194648;PDX1:0.942583235023;YY1:0.94010229007;HMX1:0.896414344318;FOX{D1,D2}:0.883233264108;PBX1:0.876542556336;POU1F1:0.829770328509;STAT1,3:0.81413132858;ATF5_CREB3:0.800048849244;RFX2..5_RFXANK_RFXAP:0.789287566592;PAX4:0.785126889358;NFATC1..3:0.783080390988;STAT2,4,6:0.772816617673;FOXO1,3,4:0.770020640301;POU2F1..3:0.734607132369;T:0.729701892903;CREB1:0.635567720363;TGIF1:0.635327841773;NKX2-2,8:0.611663915648;MYOD1:0.576061068118;E2F1..5:0.543664876304;NFY{A,B,C}:0.524999363808;NFKB1_REL_RELA:0.508435734117;AIRE:0.493332746208;FOXN1:0.490725993686;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.480761431929;IKZF2:0.47712280311;IRF7:0.455719273869;NKX6-1,2:0.437973987629;LEF1_TCF7_TCF7L1,2:0.388716020334;NKX3-1:0.383186791724;MYB:0.38100446227;SNAI1..3:0.379617690464;ZEB1:0.371748937082;PAX2:0.322155963005;BREu{core}:0.309105834576;LMO2:0.268039619035;SPZ1:0.242455314743;HES1:0.23039306157;NFE2L1:0.216252116423;SREBF1,2:0.213792859368;JUN:0.187845835436;FOXM1:0.181061009442;TAL1_TCF{3,4,12}:0.177351849465;CUX2:0.154456010828;FOXA2:0.151226067035;EP300:0.133216019506;NRF1:0.129049656752;PITX1..3:0.0536442136333;SOX5:0.0524078154072;PAX8:0.046409354952;NFIL3:0.0379633869198;FOXP3:0.0207841078289;ZNF423:0.00961277814015;ATF4:0.00612130073545;DBP:-0.0153211481582;ATF6:-0.0337927661533;ZNF143:-0.0681035400153;OCT4_SOX2{dimer}:-0.0697146193049;FOX{I1,J2}:-0.102274248222;FOXP1:-0.104911695683;GFI1:-0.112128508695;EVI1:-0.119249062881;GLI1..3:-0.121687145126;NR5A1,2:-0.13952724023;NFIX:-0.14970323709;ZNF148:-0.155655772952;ZNF384:-0.174518456938;RXRA_VDR{dimer}:-0.185850573085;SMAD1..7,9:-0.187830049609;HOX{A6,A7,B6,B7}:-0.247293709504;HNF4A_NR2F1,2:-0.252656709102;RFX1:-0.258655259757;GCM1,2:-0.259309052902;ATF2:-0.266157369761;MYFfamily:-0.271680661269;AHR_ARNT_ARNT2:-0.278419944683;SRF:-0.285101098452;FOXQ1:-0.318913731509;ALX1:-0.334102065826;ARID5B:-0.342955148748;BACH2:-0.378243737261;NFE2L2:-0.396003890289;FOSL2:-0.397133318305;AR:-0.40495069907;NFE2:-0.407643967502;MAFB:-0.41455495091;FOS_FOS{B,L1}_JUN{B,D}:-0.416220872546;PRRX1,2:-0.421626704854;TP53:-0.428522178157;CEBPA,B_DDIT3:-0.440486337273;ESRRA:-0.444390438425;HAND1,2:-0.466940191094;HNF1A:-0.47036218338;SOX2:-0.477746705711;TFCP2:-0.477986711238;HMGA1,2:-0.487176897971;HIF1A:-0.496543468992;NHLH1,2:-0.503876711095;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.506617742994;NR3C1:-0.521898693279;RREB1:-0.525718758987;ESR1:-0.533726536869;TFDP1:-0.594219713783;VSX1,2:-0.595435341592;HSF1,2:-0.629060474131;HOXA9_MEIS1:-0.641817955165;POU5F1:-0.659915250356;POU3F1..4:-0.673710406125;HLF:-0.702289557076;FOXD3:-0.717831502643;PAX5:-0.723105610862;UFEwm:-0.745210722415;NR1H4:-0.746663230442;TFAP4:-0.747317699355;ZNF238:-0.77279581334;NANOG:-0.787450613697;REST:-0.799064160171;ONECUT1,2:-0.802182713502;NKX2-1,4:-0.819470737093;NKX2-3_NKX2-5:-0.821084364365;PPARG:-0.829862977082;PAX6:-0.852830133155;ZBTB6:-0.856945195312;ALX4:-0.863863716103;SOX{8,9,10}:-0.866023293187;MYBL2:-0.880405903724;MED-1{core}:-0.896563594838;ADNP_IRX_SIX_ZHX:-0.951141404187;SOX17:-1.01474199561;TOPORS:-1.01568081592;MZF1:-1.03979913333;PRDM1:-1.04394068884;EBF1:-1.0493697009;HBP1_HMGB_SSRP1_UBTF:-1.05473330708;NR6A1:-1.06405306395;MEF2{A,B,C,D}:-1.09521947647;MAZ:-1.09707171024;bHLH_family:-1.1432213549;HOX{A5,B5}:-1.17960672024;LHX3,4:-1.20488907723;ZFP161:-1.21088917074;GFI1B:-1.21952407596;MTE{core}:-1.24570627687;EN1,2:-1.25490292658;TBX4,5:-1.26187467348;XCPE1{core}:-1.27072391187;RBPJ:-1.28920701282;GATA4:-1.29444561378;CDC5L:-1.30755232345;TBP:-1.32054133862;KLF4:-1.32717974825;GTF2I:-1.33085310485;EGR1..3:-1.37043959213;MTF1:-1.38975388752;PATZ1:-1.39455754166;ZIC1..3:-1.39473244735;GZF1:-1.41840587863;TFAP2{A,C}:-1.51875361164;HIC1:-1.53840531412;TEF:-1.54709985557;TFAP2B:-1.58211329162;GTF2A1,2:-1.62624911048;PAX1,9:-1.63404276433;TEAD1:-1.67699438858;RXR{A,B,G}:-1.69331628058;HOX{A4,D4}:-1.73793308346;NKX3-2:-1.77860980845;TLX1..3_NFIC{dimer}:-1.78027292441;SP1:-1.839077032;IKZF1:-1.95689604558;POU6F1:-2.02298144661;XBP1:-2.02630679428;FOXL1:-2.20002231064
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11794-124C3;search_select_hide=table117:FF:11794-124C3
}}
}}

Latest revision as of 18:20, 4 June 2020

Name:CD4+CD25+CD45RA- memory regulatory T cells expanded, donor1
Species:Human (Homo sapiens)
Library ID:CNhs13204
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age25
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number17
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005636
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13204 CAGE DRX008181 DRR009053
Accession ID Hg19

Library idBAMCTSS
CNhs13204 DRZ000478 DRZ001863
Accession ID Hg38

Library idBAMCTSS
CNhs13204 DRZ011828 DRZ013213
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.408
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.168
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.216
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0459
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.125
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0193
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0.621
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0459
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.125
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.337
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.216
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.763
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.347
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.125
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0612
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.0459
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.125
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.093
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.125
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.916
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.45
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.469
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.609
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0874
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.33
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.628
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.478
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.249
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0791
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.264
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.242
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0229
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.774
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.853
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.0874
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.0874
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13204

Jaspar motifP-value
MA0002.23.27919e-9
MA0003.10.507
MA0004.10.671
MA0006.10.704
MA0007.10.526
MA0009.10.182
MA0014.10.97
MA0017.10.0397
MA0018.20.252
MA0019.10.96
MA0024.10.726
MA0025.10.243
MA0027.10.935
MA0028.14.391e-5
MA0029.10.409
MA0030.10.869
MA0031.10.313
MA0035.20.0252
MA0038.10.0543
MA0039.20.967
MA0040.10.552
MA0041.10.741
MA0042.10.885
MA0043.10.387
MA0046.10.144
MA0047.20.389
MA0048.10.643
MA0050.12.73589e-8
MA0051.10.00357
MA0052.10.00109
MA0055.10.625
MA0057.10.852
MA0058.10.958
MA0059.10.518
MA0060.10.528
MA0061.16.84243e-4
MA0062.21.93075e-15
MA0065.20.0232
MA0066.10.218
MA0067.10.424
MA0068.10.154
MA0069.10.364
MA0070.10.776
MA0071.10.431
MA0072.10.328
MA0073.10.712
MA0074.10.968
MA0076.16.38725e-8
MA0077.10.0131
MA0078.10.911
MA0079.20.568
MA0080.22.17815e-13
MA0081.10.0148
MA0083.10.31
MA0084.10.933
MA0087.10.464
MA0088.10.126
MA0090.19.26151e-5
MA0091.10.751
MA0092.10.686
MA0093.10.697
MA0099.20.103
MA0100.10.246
MA0101.10.121
MA0102.20.702
MA0103.10.0833
MA0104.20.394
MA0105.11.26667e-7
MA0106.10.891
MA0107.10.212
MA0108.22.12172e-10
MA0111.10.0619
MA0112.20.0625
MA0113.10.553
MA0114.10.139
MA0115.10.71
MA0116.13.96116e-6
MA0117.10.511
MA0119.10.378
MA0122.10.872
MA0124.10.554
MA0125.10.655
MA0131.10.468
MA0135.10.195
MA0136.18.74158e-26
MA0137.20.0167
MA0138.20.475
MA0139.10.00691
MA0140.10.0393
MA0141.10.568
MA0142.10.503
MA0143.10.179
MA0144.10.0786
MA0145.10.803
MA0146.10.263
MA0147.10.363
MA0148.10.87
MA0149.10.131
MA0150.10.869
MA0152.10.0378
MA0153.10.275
MA0154.10.00616
MA0155.10.877
MA0156.16.92387e-24
MA0157.10.108
MA0159.10.105
MA0160.10.24
MA0162.10.533
MA0163.14.28765e-12
MA0164.10.612
MA0258.10.0705
MA0259.10.587



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13204

Novel motifP-value
10.131
100.0149
1000.811
1010.22
1020.575
1030.0787
1040.673
1050.14
1060.349
1070.399
1080.663
1090.0409
110.027
1100.456
1110.279
1120.0682
1130.575
1140.102
1150.341
1160.789
1170.00275
1180.372
1190.715
120.439
1200.205
1210.4
1220.21
1230.0118
1240.14
1250.783
1260.208
1270.362
1280.725
1290.329
130.487
1300.88
1310.805
1320.821
1330.35
1340.843
1350.638
1360.591
1370.0237
1380.146
1390.112
140.309
1400.0705
1410.478
1420.941
1432.59906e-4
1440.419
1450.261
1460.58
1470.0346
1480.0462
1490.804
150.086
1500.452
1510.649
1520.717
1530.883
1540.789
1550.029
1560.608
1570.0683
1580.431
1590.273
160.475
1600.558
1610.229
1620.0848
1630.536
1640.145
1650.244
1660.659
1670.562
1680.258
1690.22
170.826
180.383
190.779
20.911
200.742
210.461
220.965
230.803
240.729
250.0701
260.114
270.14
280.426
290.00715
30.0381
300.224
310.996
320.55
330.411
340.951
350.194
360.0212
370.129
380.648
390.409
40.961
400.293
410.355
420.0631
430.34
440.228
450.667
460.0771
470.00567
480.0393
490.209
50.448
500.66
510.527
520.332
530.468
540.8
550.73
560.484
570.43
580.094
590.171
60.739
600.385
610.0999
620.0364
630.645
640.159
650.816
660.952
670.71
680.762
690.798
70.244
700.0265
710.0191
720.016
730.359
740.297
750.0185
760.412
770.721
780.0492
790.488
80.544
800.0271
810.352
820.0548
830.912
840.264
850.731
860.13
870.191
880.683
890.931
90.586
900.034
910.562
920.388
930.29
940.0985
950.0146
960.0351
970.324
980.35
990.0399



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13204


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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