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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000063,UBERON:0000064,UBERON:0000065,UBERON:0000072,UBERON:0000077,UBERON:0000078,UBERON:0000119,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000490,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0000974,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001042,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0001557,UBERON:0002050,UBERON:0002193,UBERON:0002342,UBERON:0002346,UBERON:0002368,UBERON:0002370,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002530,UBERON:0002532,UBERON:0003075,UBERON:0003104,UBERON:0003295,UBERON:0003351,UBERON:0003408,UBERON:0003929,UBERON:0004119,UBERON:0004120,UBERON:0004121,UBERON:0004177,UBERON:0004185,UBERON:0004807,UBERON:0004921,UBERON:0005057,UBERON:0005058,UBERON:0005291,UBERON:0005423,UBERON:0005428,UBERON:0005434,UBERON:0005562,UBERON:0005911,UBERON:0006562,UBERON:0006598,UBERON:0007026,UBERON:0007284,UBERON:0007690,UBERON:0009113,UBERON:0009142,UBERON:0009145
|DRA_sample_Accession=CAGE@SAMD00005773
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000624,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000805,CL:0000806,CL:0000807,CL:0000808,CL:0000809,CL:0000810,CL:0000813,CL:0000827,CL:0000837,CL:0000838,CL:0000893,CL:0000894,CL:0000895,CL:0000896,CL:0000897,CL:0000898,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420,CL:0002425,CL:0002427,CL:0002428,CL:0002429,CL:0002431,CL:0002432,CL:0002433,CL:0002436,CL:0002489
|accession_numbers=CAGE;DRX008188;DRR009060;DRZ000485;DRZ001870;DRZ011835;DRZ013220
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001
|comment=Changed from previous label. TODO: full classification
|comment=Changed from previous label. TODO: full classification
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
|expression_enrichment_score
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|fonse_cell_line_closure=
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13813.11913-125G5.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13813.11913-125G5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13813.11913-125G5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13813.11913-125G5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%2520expanded%252c%2520donor2.CNhs13813.11913-125G5.hg38.nobarcode.ctss.bed.gz
|id=FF:11913-125G5
|id=FF:11913-125G5
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_a=EFO:0002091;;FF:0000002;;FF:0000210
|is_obsolete=
|library_id=CNhs13813
|library_id_phase_based=2:CNhs13813
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11913
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11913
|name=CD4+CD25-CD45RA+ naive conventional T cells expanded, donor2
|name=CD4+CD25-CD45RA+ naive conventional T cells expanded, donor2
|namespace=
|namespace=
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|profile_rnaseq=
|profile_rnaseq=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=5.5804
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|sample_age=23
|sample_category=primary cells
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Line 69: Line 91:
|sample_ethnicity=
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|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.5821706603146e-237!GO:0043227;membrane-bound organelle;4.42139456561295e-210!GO:0043231;intracellular membrane-bound organelle;9.95864360878492e-210!GO:0043226;organelle;9.3874509436832e-196!GO:0043229;intracellular organelle;4.50038452327191e-195!GO:0005737;cytoplasm;2.73137583171114e-152!GO:0044422;organelle part;1.03247088208936e-139!GO:0044446;intracellular organelle part;6.5806881191322e-138!GO:0005634;nucleus;1.06557627169792e-105!GO:0044444;cytoplasmic part;1.06557627169792e-105!GO:0032991;macromolecular complex;2.17079750084157e-105!GO:0044237;cellular metabolic process;1.78246246687668e-100!GO:0043170;macromolecule metabolic process;8.06172698954217e-97!GO:0044238;primary metabolic process;5.9435824091794e-96!GO:0030529;ribonucleoprotein complex;8.8359203704601e-87!GO:0044428;nuclear part;2.83675827212852e-80!GO:0003723;RNA binding;5.63429893188895e-76!GO:0043233;organelle lumen;1.99086555352818e-69!GO:0031974;membrane-enclosed lumen;1.99086555352818e-69!GO:0043283;biopolymer metabolic process;4.41714966819704e-64!GO:0005739;mitochondrion;2.75107194140384e-62!GO:0005515;protein binding;1.09981323559645e-58!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.22110348611092e-54!GO:0043234;protein complex;1.99654966800427e-54!GO:0006412;translation;2.59550047601378e-54!GO:0019538;protein metabolic process;5.76440392521368e-51!GO:0010467;gene expression;7.23638337338983e-51!GO:0006396;RNA processing;9.37776649728087e-51!GO:0005840;ribosome;5.46849606133641e-50!GO:0033036;macromolecule localization;2.29921410435309e-48!GO:0044267;cellular protein metabolic process;4.64570875838272e-48!GO:0044260;cellular macromolecule metabolic process;2.19288526242992e-47!GO:0015031;protein transport;2.54273748319766e-46!GO:0031981;nuclear lumen;3.7674240281361e-46!GO:0008104;protein localization;9.28980403281032e-45!GO:0045184;establishment of protein localization;1.60375050638498e-44!GO:0006259;DNA metabolic process;3.29963230954782e-44!GO:0016071;mRNA metabolic process;3.66607425676953e-44!GO:0031090;organelle membrane;4.72302478281188e-44!GO:0003735;structural constituent of ribosome;4.86329657129554e-44!GO:0044429;mitochondrial part;3.22593505079953e-43!GO:0009059;macromolecule biosynthetic process;5.41465043963429e-42!GO:0031967;organelle envelope;4.73278580293534e-41!GO:0031975;envelope;1.10755088028329e-40!GO:0033279;ribosomal subunit;1.53694008228979e-38!GO:0006397;mRNA processing;8.35977318265453e-38!GO:0008380;RNA splicing;1.05560341380139e-37!GO:0016043;cellular component organization and biogenesis;4.17680525813261e-36!GO:0003676;nucleic acid binding;4.67494006082376e-36!GO:0009058;biosynthetic process;2.3024483994078e-35!GO:0044249;cellular biosynthetic process;3.15497477494423e-35!GO:0005829;cytosol;5.02268266951216e-35!GO:0046907;intracellular transport;6.2367094906952e-35!GO:0065003;macromolecular complex assembly;2.46415968329679e-33!GO:0006886;intracellular protein transport;2.54291112275726e-33!GO:0007049;cell cycle;4.63161065102938e-32!GO:0005654;nucleoplasm;2.03873161217382e-30!GO:0006996;organelle organization and biogenesis;2.50670543696315e-30!GO:0000166;nucleotide binding;6.53512266819228e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.09371848090852e-29!GO:0022607;cellular component assembly;4.17293439076622e-29!GO:0043228;non-membrane-bound organelle;7.1067254179242e-29!GO:0043232;intracellular non-membrane-bound organelle;7.1067254179242e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.52941489999819e-29!GO:0005681;spliceosome;1.72142403611345e-28!GO:0005740;mitochondrial envelope;1.1812920384538e-27!GO:0005694;chromosome;4.49203697997971e-27!GO:0019866;organelle inner membrane;6.1667785888233e-27!GO:0031966;mitochondrial membrane;2.29928504538208e-26!GO:0051641;cellular localization;4.01297960957877e-26!GO:0051649;establishment of cellular localization;7.93198796425537e-26!GO:0022402;cell cycle process;9.88267872873344e-26!GO:0044445;cytosolic part;5.1629045948586e-25!GO:0044427;chromosomal part;5.30232960547317e-25!GO:0006974;response to DNA damage stimulus;6.92495836052272e-25!GO:0012501;programmed cell death;1.009803470766e-24!GO:0006915;apoptosis;1.20662878418703e-24!GO:0016070;RNA metabolic process;1.71928588637757e-24!GO:0005743;mitochondrial inner membrane;5.40288395850151e-24!GO:0008219;cell death;2.25192717805809e-23!GO:0016265;death;2.25192717805809e-23!GO:0006512;ubiquitin cycle;5.41962938409371e-23!GO:0044451;nucleoplasm part;6.6098520539468e-23!GO:0051276;chromosome organization and biogenesis;1.27110145090044e-22!GO:0032553;ribonucleotide binding;2.10648762039478e-22!GO:0032555;purine ribonucleotide binding;2.10648762039478e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.52881454587669e-22!GO:0016462;pyrophosphatase activity;4.04040337563233e-22!GO:0006119;oxidative phosphorylation;4.20182137744931e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;4.74788057806096e-22!GO:0000278;mitotic cell cycle;1.32658967910113e-21!GO:0017076;purine nucleotide binding;1.50789564822303e-21!GO:0017111;nucleoside-triphosphatase activity;2.1923466837482e-21!GO:0006281;DNA repair;2.05127321124896e-20!GO:0015935;small ribosomal subunit;2.05436869495546e-20!GO:0044455;mitochondrial membrane part;3.92701474114531e-20!GO:0016874;ligase activity;1.13311165927586e-19!GO:0022618;protein-RNA complex assembly;1.49023510248683e-19!GO:0015934;large ribosomal subunit;2.42875146756767e-19!GO:0005524;ATP binding;2.92611027460615e-19!GO:0043412;biopolymer modification;3.90461564182938e-19!GO:0031980;mitochondrial lumen;4.49148300040975e-19!GO:0005759;mitochondrial matrix;4.49148300040975e-19!GO:0044265;cellular macromolecule catabolic process;9.75775236533703e-19!GO:0006325;establishment and/or maintenance of chromatin architecture;1.15558360042782e-18!GO:0032559;adenyl ribonucleotide binding;1.34760979109514e-18!GO:0022403;cell cycle phase;5.84899818099837e-18!GO:0006323;DNA packaging;7.57067679976818e-18!GO:0030554;adenyl nucleotide binding;1.36196764833447e-17!GO:0012505;endomembrane system;1.73558931487383e-17!GO:0042981;regulation of apoptosis;1.97238424683489e-17!GO:0006605;protein targeting;3.02735470922455e-17!GO:0043067;regulation of programmed cell death;3.55711298409203e-17!GO:0000087;M phase of mitotic cell cycle;4.53433948118612e-17!GO:0006464;protein modification process;5.5064063699243e-17!GO:0005746;mitochondrial respiratory chain;7.19051111278472e-17!GO:0006913;nucleocytoplasmic transport;1.00869885907934e-16!GO:0007067;mitosis;1.09989045024017e-16!GO:0005730;nucleolus;2.12733639197718e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;2.21593433484875e-16!GO:0016604;nuclear body;2.21593433484875e-16!GO:0019941;modification-dependent protein catabolic process;2.32596286591624e-16!GO:0043632;modification-dependent macromolecule catabolic process;2.32596286591624e-16!GO:0051169;nuclear transport;2.52394067530288e-16!GO:0016887;ATPase activity;4.28009607741256e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.99093319896252e-16!GO:0044257;cellular protein catabolic process;5.566675199985e-16!GO:0000785;chromatin;5.82674669027836e-16!GO:0051726;regulation of cell cycle;8.59837981408271e-16!GO:0043285;biopolymer catabolic process;8.9056183042971e-16!GO:0042623;ATPase activity, coupled;9.35816638737019e-16!GO:0000502;proteasome complex (sensu Eukaryota);9.70445048914467e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.10664798418444e-15!GO:0003954;NADH dehydrogenase activity;1.10664798418444e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.10664798418444e-15!GO:0008135;translation factor activity, nucleic acid binding;1.20673118074274e-15!GO:0000074;regulation of progression through cell cycle;1.43349088383866e-15!GO:0043687;post-translational protein modification;1.47412770361736e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.49289932100534e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.51509896259906e-15!GO:0009719;response to endogenous stimulus;1.56974011841701e-15!GO:0051301;cell division;2.86186448704644e-15!GO:0006333;chromatin assembly or disassembly;3.51900155114162e-15!GO:0006457;protein folding;3.56146734156473e-15!GO:0000279;M phase;5.98668689673333e-15!GO:0009057;macromolecule catabolic process;1.10201330484082e-14!GO:0005635;nuclear envelope;2.61520159444495e-14!GO:0008134;transcription factor binding;3.3161051052897e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.37101497656099e-14!GO:0065004;protein-DNA complex assembly;4.09596916595232e-14!GO:0042775;organelle ATP synthesis coupled electron transport;9.15355680266738e-14!GO:0042773;ATP synthesis coupled electron transport;9.15355680266738e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.02425901776276e-13!GO:0000375;RNA splicing, via transesterification reactions;1.02425901776276e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.02425901776276e-13!GO:0048770;pigment granule;1.03963550993077e-13!GO:0042470;melanosome;1.03963550993077e-13!GO:0031965;nuclear membrane;1.31943387705155e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.38389309240736e-13!GO:0045271;respiratory chain complex I;1.38389309240736e-13!GO:0005747;mitochondrial respiratory chain complex I;1.38389309240736e-13!GO:0005761;mitochondrial ribosome;1.78377539471206e-13!GO:0000313;organellar ribosome;1.78377539471206e-13!GO:0044248;cellular catabolic process;1.84367668839682e-13!GO:0006260;DNA replication;3.93413931271476e-13!GO:0050794;regulation of cellular process;3.97649393716518e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.79231840396744e-13!GO:0003743;translation initiation factor activity;7.57860824551308e-13!GO:0044453;nuclear membrane part;7.70230512842176e-13!GO:0006413;translational initiation;1.20885283924648e-12!GO:0051186;cofactor metabolic process;2.51633372441654e-12!GO:0016607;nuclear speck;2.54463001680806e-12!GO:0006334;nucleosome assembly;4.19828300378047e-12!GO:0030163;protein catabolic process;4.68048281488862e-12!GO:0017038;protein import;9.1070309751105e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.33310539521904e-12!GO:0004386;helicase activity;9.33310539521904e-12!GO:0044432;endoplasmic reticulum part;1.75350804977337e-11!GO:0031497;chromatin assembly;2.11101189234191e-11!GO:0048193;Golgi vesicle transport;2.40430906972466e-11!GO:0006793;phosphorus metabolic process;3.62491067891469e-11!GO:0006796;phosphate metabolic process;3.62491067891469e-11!GO:0051082;unfolded protein binding;4.37258953515799e-11!GO:0005783;endoplasmic reticulum;5.10637249160281e-11!GO:0006446;regulation of translational initiation;6.57399597420857e-11!GO:0042254;ribosome biogenesis and assembly;9.33225816423087e-11!GO:0008639;small protein conjugating enzyme activity;1.05065515265015e-10!GO:0016568;chromatin modification;1.23734900368415e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.65647199202441e-10!GO:0005643;nuclear pore;1.95262431310504e-10!GO:0004842;ubiquitin-protein ligase activity;2.09560169341073e-10!GO:0019787;small conjugating protein ligase activity;2.09560169341073e-10!GO:0006732;coenzyme metabolic process;6.10877051156491e-10!GO:0009259;ribonucleotide metabolic process;6.28513366366128e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.50835421116249e-10!GO:0008026;ATP-dependent helicase activity;7.08662099542025e-10!GO:0043566;structure-specific DNA binding;8.29026708943647e-10!GO:0016787;hydrolase activity;9.32064811067029e-10!GO:0005794;Golgi apparatus;9.33639074664101e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.98041254514115e-10!GO:0005789;endoplasmic reticulum membrane;1.01403934217513e-09!GO:0006916;anti-apoptosis;1.01691784800922e-09!GO:0003697;single-stranded DNA binding;1.08798690964682e-09!GO:0050657;nucleic acid transport;1.25949407253553e-09!GO:0051236;establishment of RNA localization;1.25949407253553e-09!GO:0050658;RNA transport;1.25949407253553e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.2619791376013e-09!GO:0006403;RNA localization;1.32334658121449e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.81668922252108e-09!GO:0006164;purine nucleotide biosynthetic process;2.04007109225402e-09!GO:0006163;purine nucleotide metabolic process;2.10503278268145e-09!GO:0019829;cation-transporting ATPase activity;2.13305763220011e-09!GO:0043069;negative regulation of programmed cell death;2.42903651578501e-09!GO:0009260;ribonucleotide biosynthetic process;2.48943035270796e-09!GO:0008565;protein transporter activity;2.91824943504298e-09!GO:0065002;intracellular protein transport across a membrane;3.46054773408142e-09!GO:0043066;negative regulation of apoptosis;3.63235754299243e-09!GO:0016310;phosphorylation;3.66116331951227e-09!GO:0016881;acid-amino acid ligase activity;4.90826079900105e-09!GO:0051170;nuclear import;5.71227851950343e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.71227851950343e-09!GO:0046930;pore complex;6.08386401723142e-09!GO:0009150;purine ribonucleotide metabolic process;6.1825379580648e-09!GO:0007243;protein kinase cascade;6.46408556585092e-09!GO:0006606;protein import into nucleus;8.47452081434839e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.08718997427671e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.16975051186676e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.33734587265715e-08!GO:0051246;regulation of protein metabolic process;1.45960466602163e-08!GO:0003712;transcription cofactor activity;1.54046848786921e-08!GO:0016192;vesicle-mediated transport;1.89762179889327e-08!GO:0000786;nucleosome;1.89762179889327e-08!GO:0006399;tRNA metabolic process;2.11137900803784e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.35180274332989e-08!GO:0050789;regulation of biological process;2.63664533600975e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.58744804568153e-08!GO:0009060;aerobic respiration;3.58744804568153e-08!GO:0006917;induction of apoptosis;4.95769257365754e-08!GO:0051028;mRNA transport;4.98818299070443e-08!GO:0065009;regulation of a molecular function;6.16941654114625e-08!GO:0048523;negative regulation of cellular process;6.41286669698871e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.57541125995291e-08!GO:0004298;threonine endopeptidase activity;7.33411121594074e-08!GO:0019222;regulation of metabolic process;7.57820341279783e-08!GO:0015986;ATP synthesis coupled proton transport;8.02159754865818e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.02159754865818e-08!GO:0012502;induction of programmed cell death;8.31587181456495e-08!GO:0051188;cofactor biosynthetic process;8.31587181456495e-08!GO:0016740;transferase activity;9.00239835412594e-08!GO:0043065;positive regulation of apoptosis;1.14320933604341e-07!GO:0005768;endosome;1.30349787919625e-07!GO:0045786;negative regulation of progression through cell cycle;1.49857555178253e-07!GO:0016779;nucleotidyltransferase activity;1.53482669840009e-07!GO:0043068;positive regulation of programmed cell death;1.84627277670744e-07!GO:0009055;electron carrier activity;2.18877653865661e-07!GO:0016072;rRNA metabolic process;2.33115955724796e-07!GO:0006364;rRNA processing;2.40233327855377e-07!GO:0000775;chromosome, pericentric region;2.40476702153773e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.45401868193118e-07!GO:0045333;cellular respiration;4.9698308242419e-07!GO:0006261;DNA-dependent DNA replication;5.01635029371232e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.26766988824903e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.26766988824903e-07!GO:0032446;protein modification by small protein conjugation;5.91918201484147e-07!GO:0006754;ATP biosynthetic process;5.9663529388946e-07!GO:0006753;nucleoside phosphate metabolic process;5.9663529388946e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.77427586053819e-07!GO:0004812;aminoacyl-tRNA ligase activity;6.77427586053819e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.77427586053819e-07!GO:0048519;negative regulation of biological process;7.13588792436925e-07!GO:0005819;spindle;7.13588792436925e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.58051442353535e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.72915107032347e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.72915107032347e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.72915107032347e-07!GO:0006888;ER to Golgi vesicle-mediated transport;7.74246942324086e-07!GO:0009141;nucleoside triphosphate metabolic process;7.7899348619497e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.82883974675613e-07!GO:0009056;catabolic process;9.54428950832945e-07!GO:0030120;vesicle coat;1.01853273339274e-06!GO:0030662;coated vesicle membrane;1.01853273339274e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.09268201675839e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.12512541948611e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.12512541948611e-06!GO:0019899;enzyme binding;1.19589123995899e-06!GO:0045259;proton-transporting ATP synthase complex;1.34094640382409e-06!GO:0016567;protein ubiquitination;1.35108733061306e-06!GO:0046034;ATP metabolic process;1.37231659312951e-06!GO:0000245;spliceosome assembly;1.39076136644998e-06!GO:0043038;amino acid activation;1.39779885249561e-06!GO:0006418;tRNA aminoacylation for protein translation;1.39779885249561e-06!GO:0043039;tRNA aminoacylation;1.39779885249561e-06!GO:0006461;protein complex assembly;1.63117283432837e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.89784064928948e-06!GO:0015399;primary active transmembrane transporter activity;1.89784064928948e-06!GO:0048522;positive regulation of cellular process;1.95107362009174e-06!GO:0006099;tricarboxylic acid cycle;2.02193124704869e-06!GO:0046356;acetyl-CoA catabolic process;2.02193124704869e-06!GO:0048475;coated membrane;2.21962626458614e-06!GO:0030117;membrane coat;2.21962626458614e-06!GO:0015630;microtubule cytoskeleton;2.25567159020437e-06!GO:0005813;centrosome;2.37555656835667e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.42115244893033e-06!GO:0006310;DNA recombination;2.57904157043534e-06!GO:0008632;apoptotic program;2.75485973415593e-06!GO:0007242;intracellular signaling cascade;2.87843979247272e-06!GO:0005815;microtubule organizing center;3.82409939461315e-06!GO:0051329;interphase of mitotic cell cycle;4.21665378010562e-06!GO:0051325;interphase;4.39862747455364e-06!GO:0009108;coenzyme biosynthetic process;4.40276088050104e-06!GO:0031323;regulation of cellular metabolic process;4.49267727417377e-06!GO:0009117;nucleotide metabolic process;4.57513791625207e-06!GO:0051168;nuclear export;4.57513791625207e-06!GO:0000075;cell cycle checkpoint;4.74108634090601e-06!GO:0006366;transcription from RNA polymerase II promoter;5.36585540493857e-06!GO:0005793;ER-Golgi intermediate compartment;5.81108626282981e-06!GO:0006084;acetyl-CoA metabolic process;6.54397552758065e-06!GO:0000151;ubiquitin ligase complex;7.15739716131109e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.68808889064051e-06!GO:0031324;negative regulation of cellular metabolic process;7.70699251871629e-06!GO:0006613;cotranslational protein targeting to membrane;9.43432614406146e-06!GO:0003713;transcription coactivator activity;9.75845489163259e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.03891872896956e-05!GO:0007005;mitochondrion organization and biogenesis;1.17620638642227e-05!GO:0007088;regulation of mitosis;1.31187926284524e-05!GO:0003724;RNA helicase activity;1.31288796540049e-05!GO:0006752;group transfer coenzyme metabolic process;1.4365069608728e-05!GO:0006401;RNA catabolic process;1.46705690968273e-05!GO:0009615;response to virus;1.57398021049118e-05!GO:0043623;cellular protein complex assembly;1.67881990956982e-05!GO:0009109;coenzyme catabolic process;2.05189773571181e-05!GO:0016563;transcription activator activity;2.15867014338131e-05!GO:0005773;vacuole;2.35678947497225e-05!GO:0004674;protein serine/threonine kinase activity;2.35829748486037e-05!GO:0005657;replication fork;2.51808271517391e-05!GO:0005762;mitochondrial large ribosomal subunit;2.58966087530364e-05!GO:0000315;organellar large ribosomal subunit;2.58966087530364e-05!GO:0005525;GTP binding;3.23621684511699e-05!GO:0051187;cofactor catabolic process;3.63109128502907e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.6821945908784e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.28718389186946e-05!GO:0003690;double-stranded DNA binding;4.42030835965915e-05!GO:0006402;mRNA catabolic process;4.93954720287988e-05!GO:0006350;transcription;5.21057835657933e-05!GO:0050790;regulation of catalytic activity;5.39448237207593e-05!GO:0009892;negative regulation of metabolic process;5.86933844742018e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.95021168715312e-05!GO:0016363;nuclear matrix;6.3382480955169e-05!GO:0065007;biological regulation;6.55639578083975e-05!GO:0000323;lytic vacuole;6.76299369007793e-05!GO:0005764;lysosome;6.76299369007793e-05!GO:0006612;protein targeting to membrane;6.82974292205931e-05!GO:0003924;GTPase activity;7.85120146068938e-05!GO:0006417;regulation of translation;8.96657974319651e-05!GO:0009967;positive regulation of signal transduction;9.26126864094961e-05!GO:0005770;late endosome;0.000111678068520434!GO:0008094;DNA-dependent ATPase activity;0.000113772578485126!GO:0003899;DNA-directed RNA polymerase activity;0.000117092334842008!GO:0016564;transcription repressor activity;0.000142001876793067!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000149838957481163!GO:0044440;endosomal part;0.000155349931778251!GO:0010008;endosome membrane;0.000155349931778251!GO:0005885;Arp2/3 protein complex;0.000166978127926431!GO:0015992;proton transport;0.000179865656035117!GO:0006818;hydrogen transport;0.000180532840827541!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000182863095466102!GO:0010468;regulation of gene expression;0.000191564061861792!GO:0044431;Golgi apparatus part;0.000203267128056557!GO:0003684;damaged DNA binding;0.000204658186088745!GO:0048518;positive regulation of biological process;0.000219062238385346!GO:0051427;hormone receptor binding;0.000219465720825264!GO:0005798;Golgi-associated vesicle;0.0002257144411172!GO:0042110;T cell activation;0.000238657514996928!GO:0006302;double-strand break repair;0.000240421994103164!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000245548119214913!GO:0032561;guanyl ribonucleotide binding;0.000281216674589657!GO:0019001;guanyl nucleotide binding;0.000281216674589657!GO:0005637;nuclear inner membrane;0.000281325601060063!GO:0008186;RNA-dependent ATPase activity;0.000281325601060063!GO:0003729;mRNA binding;0.000285774835176593!GO:0007051;spindle organization and biogenesis;0.000287300909019279!GO:0000314;organellar small ribosomal subunit;0.000319943609419156!GO:0005763;mitochondrial small ribosomal subunit;0.000319943609419156!GO:0030384;phosphoinositide metabolic process;0.000323483460218217!GO:0000776;kinetochore;0.000368583192527728!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000377126498053776!GO:0008234;cysteine-type peptidase activity;0.000381206394504366!GO:0035257;nuclear hormone receptor binding;0.000423004847593458!GO:0007059;chromosome segregation;0.000450368608664068!GO:0031326;regulation of cellular biosynthetic process;0.000455270551514633!GO:0043021;ribonucleoprotein binding;0.000455698062466078!GO:0051052;regulation of DNA metabolic process;0.000463963477091438!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000467901673716299!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000505057123786908!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000532413710745036!GO:0008654;phospholipid biosynthetic process;0.000565502521216746!GO:0060090;molecular adaptor activity;0.000573859961430267!GO:0007093;mitotic cell cycle checkpoint;0.00062432852867787!GO:0004518;nuclease activity;0.00062432852867787!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000626301184872133!GO:0007006;mitochondrial membrane organization and biogenesis;0.000637922767802867!GO:0005667;transcription factor complex;0.00069851422305896!GO:0006650;glycerophospholipid metabolic process;0.000790243657727158!GO:0003682;chromatin binding;0.000804643207609574!GO:0003678;DNA helicase activity;0.000805224727931007!GO:0048468;cell development;0.000820567581617647!GO:0043681;protein import into mitochondrion;0.000825766231794796!GO:0004004;ATP-dependent RNA helicase activity;0.000828984511124351!GO:0051252;regulation of RNA metabolic process;0.000828984511124351!GO:0006289;nucleotide-excision repair;0.00086695696750566!GO:0006891;intra-Golgi vesicle-mediated transport;0.000911892742525228!GO:0005769;early endosome;0.000968682022643794!GO:0009165;nucleotide biosynthetic process;0.000972648743623479!GO:0019843;rRNA binding;0.000991781256536401!GO:0000082;G1/S transition of mitotic cell cycle;0.0010350447773913!GO:0016481;negative regulation of transcription;0.0010350447773913!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00103798820638411!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00103798820638411!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00103798820638411!GO:0006414;translational elongation;0.00105170224410604!GO:0003677;DNA binding;0.00116097231795048!GO:0001772;immunological synapse;0.00123991380252955!GO:0007050;cell cycle arrest;0.00125065636953435!GO:0006352;transcription initiation;0.00135667372443791!GO:0006611;protein export from nucleus;0.0013679903571918!GO:0008270;zinc ion binding;0.00139678189617393!GO:0046489;phosphoinositide biosynthetic process;0.00147174678419473!GO:0004527;exonuclease activity;0.00150350014499187!GO:0005048;signal sequence binding;0.00150350014499187!GO:0031072;heat shock protein binding;0.00151364471504767!GO:0000287;magnesium ion binding;0.00154842740715971!GO:0030658;transport vesicle membrane;0.00160256988977362!GO:0006383;transcription from RNA polymerase III promoter;0.0016292159473173!GO:0019867;outer membrane;0.0016478767578392!GO:0005741;mitochondrial outer membrane;0.00165023636829925!GO:0000228;nuclear chromosome;0.00179789243820458!GO:0031968;organelle outer membrane;0.00182991325860532!GO:0048500;signal recognition particle;0.00185298926250677!GO:0016741;transferase activity, transferring one-carbon groups;0.00197845394183924!GO:0051251;positive regulation of lymphocyte activation;0.00200038894753754!GO:0008168;methyltransferase activity;0.0021183905253286!GO:0000139;Golgi membrane;0.00212861127618706!GO:0016605;PML body;0.002246089578383!GO:0016853;isomerase activity;0.00235221895172239!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00235221895172239!GO:0032259;methylation;0.00242457612030536!GO:0022415;viral reproductive process;0.00242457612030536!GO:0051789;response to protein stimulus;0.00254298083205363!GO:0006986;response to unfolded protein;0.00254298083205363!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00262364378162358!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00262364378162358!GO:0031982;vesicle;0.00262515658545309!GO:0005684;U2-dependent spliceosome;0.00265258437355933!GO:0046474;glycerophospholipid biosynthetic process;0.00276759988471511!GO:0032774;RNA biosynthetic process;0.00278470730324357!GO:0022890;inorganic cation transmembrane transporter activity;0.0027902365203178!GO:0045454;cell redox homeostasis;0.00291033627169309!GO:0007265;Ras protein signal transduction;0.0029885090536203!GO:0016311;dephosphorylation;0.00328808013354916!GO:0006351;transcription, DNA-dependent;0.00332190447903864!GO:0007264;small GTPase mediated signal transduction;0.00336260406592861!GO:0051092;activation of NF-kappaB transcription factor;0.00346697645473328!GO:0005774;vacuolar membrane;0.00350324283716798!GO:0006607;NLS-bearing substrate import into nucleus;0.00354361190162957!GO:0043414;biopolymer methylation;0.00359155878328273!GO:0042101;T cell receptor complex;0.00360204324285017!GO:0006405;RNA export from nucleus;0.00360452590889748!GO:0009889;regulation of biosynthetic process;0.0036335731168686!GO:0047485;protein N-terminus binding;0.0036335731168686!GO:0051920;peroxiredoxin activity;0.00367468288313543!GO:0046822;regulation of nucleocytoplasmic transport;0.00369870655630116!GO:0032508;DNA duplex unwinding;0.00385109215662165!GO:0032392;DNA geometric change;0.00385109215662165!GO:0051223;regulation of protein transport;0.00397280544669028!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00407029680432428!GO:0045047;protein targeting to ER;0.00407029680432428!GO:0008033;tRNA processing;0.00414837375081101!GO:0030660;Golgi-associated vesicle membrane;0.00426850399734918!GO:0042802;identical protein binding;0.00433050647104251!GO:0045449;regulation of transcription;0.00443774787407874!GO:0003711;transcription elongation regulator activity;0.00445663331085019!GO:0006338;chromatin remodeling;0.00448921633877842!GO:0008624;induction of apoptosis by extracellular signals;0.00478680939631465!GO:0043488;regulation of mRNA stability;0.00483135345815352!GO:0043487;regulation of RNA stability;0.00483135345815352!GO:0008312;7S RNA binding;0.00484178523767418!GO:0009124;nucleoside monophosphate biosynthetic process;0.00485452749485011!GO:0009123;nucleoside monophosphate metabolic process;0.00485452749485011!GO:0015631;tubulin binding;0.00487392029089801!GO:0046649;lymphocyte activation;0.00488588681958085!GO:0016251;general RNA polymerase II transcription factor activity;0.00494373079903364!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00558453334847194!GO:0000059;protein import into nucleus, docking;0.00566346388457551!GO:0042393;histone binding;0.00597076486689292!GO:0019901;protein kinase binding;0.0059855436719568!GO:0006284;base-excision repair;0.00600997214753032!GO:0044452;nucleolar part;0.00603374054280372!GO:0016788;hydrolase activity, acting on ester bonds;0.00603374054280372!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00603974330783298!GO:0030118;clathrin coat;0.00605386787481321!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.00613880720712079!GO:0048471;perinuclear region of cytoplasm;0.00620061026977002!GO:0050870;positive regulation of T cell activation;0.00625749553311666!GO:0044438;microbody part;0.00628168923297536!GO:0044439;peroxisomal part;0.00628168923297536!GO:0000209;protein polyubiquitination;0.00628168923297536!GO:0003714;transcription corepressor activity;0.00628168923297536!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00628168923297536!GO:0015002;heme-copper terminal oxidase activity;0.00628168923297536!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00628168923297536!GO:0004129;cytochrome-c oxidase activity;0.00628168923297536!GO:0031988;membrane-bound vesicle;0.00634576031471554!GO:0016197;endosome transport;0.00649237820050049!GO:0030518;steroid hormone receptor signaling pathway;0.00659100999196086!GO:0005070;SH3/SH2 adaptor activity;0.0066348913234377!GO:0005765;lysosomal membrane;0.00664750542373414!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00677461628457832!GO:0031902;late endosome membrane;0.00679435606794564!GO:0031410;cytoplasmic vesicle;0.00688635015421248!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0069927427864631!GO:0030663;COPI coated vesicle membrane;0.00705403700929562!GO:0030126;COPI vesicle coat;0.00705403700929562!GO:0006268;DNA unwinding during replication;0.0070814249681758!GO:0008139;nuclear localization sequence binding;0.00713993622635803!GO:0008637;apoptotic mitochondrial changes;0.00724988556760447!GO:0031124;mRNA 3'-end processing;0.00724988556760447!GO:0030880;RNA polymerase complex;0.00724988556760447!GO:0007052;mitotic spindle organization and biogenesis;0.00731563298415704!GO:0051539;4 iron, 4 sulfur cluster binding;0.00737389399143542!GO:0042770;DNA damage response, signal transduction;0.00738861945371989!GO:0044454;nuclear chromosome part;0.00754744082328486!GO:0044437;vacuolar part;0.00763077612397552!GO:0051087;chaperone binding;0.00763077612397552!GO:0030137;COPI-coated vesicle;0.00775538839243857!GO:0051090;regulation of transcription factor activity;0.00781260202042234!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00783223015836609!GO:0016584;nucleosome positioning;0.00787988415713319!GO:0000922;spindle pole;0.00803514315932351!GO:0019900;kinase binding;0.0080740340778985!GO:0033116;ER-Golgi intermediate compartment membrane;0.0081307158865306!GO:0045936;negative regulation of phosphate metabolic process;0.00817728872894256!GO:0015980;energy derivation by oxidation of organic compounds;0.00822504331998465!GO:0043281;regulation of caspase activity;0.00826980474553921!GO:0046966;thyroid hormone receptor binding;0.00840209329200912!GO:0006497;protein amino acid lipidation;0.00856073954611247!GO:0016791;phosphoric monoester hydrolase activity;0.00862145875462691!GO:0030127;COPII vesicle coat;0.00862145875462691!GO:0012507;ER to Golgi transport vesicle membrane;0.00862145875462691!GO:0048487;beta-tubulin binding;0.00864663557610204!GO:0031252;leading edge;0.00864663557610204!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00904455377538087!GO:0043596;nuclear replication fork;0.00909875903484608!GO:0030176;integral to endoplasmic reticulum membrane;0.00913318148657021!GO:0030521;androgen receptor signaling pathway;0.00951886643469305!GO:0051249;regulation of lymphocyte activation;0.00973344662502372!GO:0051881;regulation of mitochondrial membrane potential;0.00977163607264085!GO:0006626;protein targeting to mitochondrion;0.00978908314227346!GO:0031903;microbody membrane;0.00989821529170688!GO:0005778;peroxisomal membrane;0.00989821529170688!GO:0050865;regulation of cell activation;0.00995062515973633!GO:0006506;GPI anchor biosynthetic process;0.00997117489112231!GO:0016859;cis-trans isomerase activity;0.0100457403193697!GO:0009116;nucleoside metabolic process;0.0101112524975546!GO:0051336;regulation of hydrolase activity;0.0101807597971444!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0104576824324483!GO:0050863;regulation of T cell activation;0.010657268480432!GO:0009161;ribonucleoside monophosphate metabolic process;0.0107922452582155!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0107922452582155!GO:0000910;cytokinesis;0.0109641384688211!GO:0006091;generation of precursor metabolites and energy;0.0110061229791721!GO:0008629;induction of apoptosis by intracellular signals;0.0110820322527315!GO:0030134;ER to Golgi transport vesicle;0.0113570031822409!GO:0006950;response to stress;0.0114425730955825!GO:0000049;tRNA binding;0.0115638092377078!GO:0006505;GPI anchor metabolic process;0.0117863531189089!GO:0016301;kinase activity;0.011929788338353!GO:0051059;NF-kappaB binding;0.0120790843657613!GO:0016272;prefoldin complex;0.0122055251314651!GO:0043621;protein self-association;0.0124630854529438!GO:0051540;metal cluster binding;0.0124630854529438!GO:0051536;iron-sulfur cluster binding;0.0124630854529438!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0124630854529438!GO:0010257;NADH dehydrogenase complex assembly;0.0124630854529438!GO:0033108;mitochondrial respiratory chain complex assembly;0.0124630854529438!GO:0016023;cytoplasmic membrane-bound vesicle;0.0125928363607721!GO:0008022;protein C-terminus binding;0.0131549760084564!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0133082663534405!GO:0000428;DNA-directed RNA polymerase complex;0.0133082663534405!GO:0009112;nucleobase metabolic process;0.0133188472664097!GO:0000792;heterochromatin;0.0133545887787213!GO:0005788;endoplasmic reticulum lumen;0.0142018671651595!GO:0003746;translation elongation factor activity;0.0144856425019143!GO:0030522;intracellular receptor-mediated signaling pathway;0.0146075626808262!GO:0046914;transition metal ion binding;0.0150187471795979!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0150932454471318!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0152686049357073!GO:0006839;mitochondrial transport;0.0153541755502678!GO:0004003;ATP-dependent DNA helicase activity;0.0153541755502678!GO:0004722;protein serine/threonine phosphatase activity;0.0153541755502678!GO:0006595;polyamine metabolic process;0.0153541755502678!GO:0051235;maintenance of localization;0.0154725393489764!GO:0032940;secretion by cell;0.0154725393489764!GO:0005869;dynactin complex;0.0157180332752049!GO:0045045;secretory pathway;0.0161549355448986!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0163869266085407!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0163869266085407!GO:0009126;purine nucleoside monophosphate metabolic process;0.0163869266085407!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0163869266085407!GO:0051338;regulation of transferase activity;0.0164763895791381!GO:0003725;double-stranded RNA binding;0.016544358237993!GO:0004576;oligosaccharyl transferase activity;0.0167594438389667!GO:0045321;leukocyte activation;0.0168157095319848!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0175763373950884!GO:0042326;negative regulation of phosphorylation;0.0176972494259088!GO:0009966;regulation of signal transduction;0.0177987145175952!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0178598289010737!GO:0030867;rough endoplasmic reticulum membrane;0.0181552812287889!GO:0006275;regulation of DNA replication;0.018521213976141!GO:0040029;regulation of gene expression, epigenetic;0.0185256239832991!GO:0016569;covalent chromatin modification;0.0185717509995738!GO:0019210;kinase inhibitor activity;0.0186988984217516!GO:0030695;GTPase regulator activity;0.0187432390513193!GO:0046426;negative regulation of JAK-STAT cascade;0.0188500401291637!GO:0016763;transferase activity, transferring pentosyl groups;0.0190932138342101!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0192048302306141!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0192048302306141!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0192048302306141!GO:0031625;ubiquitin protein ligase binding;0.0192550019716746!GO:0031123;RNA 3'-end processing;0.0193093738909026!GO:0022411;cellular component disassembly;0.0193345574735314!GO:0004177;aminopeptidase activity;0.0194754340756693!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0194754340756693!GO:0006919;caspase activation;0.019625994632992!GO:0043549;regulation of kinase activity;0.0197116581017024!GO:0006376;mRNA splice site selection;0.0197116581017024!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0197116581017024!GO:0019783;small conjugating protein-specific protease activity;0.0199408944263905!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0204714673872429!GO:0032200;telomere organization and biogenesis;0.0204714673872429!GO:0000723;telomere maintenance;0.0204714673872429!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0205754361872492!GO:0008047;enzyme activator activity;0.0208923644974938!GO:0006470;protein amino acid dephosphorylation;0.0209128761024282!GO:0004721;phosphoprotein phosphatase activity;0.0209128761024282!GO:0008408;3'-5' exonuclease activity;0.0210380140556029!GO:0004532;exoribonuclease activity;0.0211156585142812!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0211156585142812!GO:0007259;JAK-STAT cascade;0.0219076546393803!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.022084626102228!GO:0030125;clathrin vesicle coat;0.022084626102228!GO:0030665;clathrin coated vesicle membrane;0.022084626102228!GO:0005876;spindle microtubule;0.0221511363370957!GO:0004843;ubiquitin-specific protease activity;0.02230845604123!GO:0035258;steroid hormone receptor binding;0.0226506870511179!GO:0045892;negative regulation of transcription, DNA-dependent;0.0227574875685624!GO:0030132;clathrin coat of coated pit;0.0227809658379746!GO:0051098;regulation of binding;0.0229573707830222!GO:0004860;protein kinase inhibitor activity;0.0231373499050365!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0231532149434504!GO:0008276;protein methyltransferase activity;0.0234148250825022!GO:0046467;membrane lipid biosynthetic process;0.0235650544759575!GO:0045792;negative regulation of cell size;0.023707172538264!GO:0042158;lipoprotein biosynthetic process;0.0239545492559747!GO:0000339;RNA cap binding;0.0245375666204083!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0246014935628836!GO:0008213;protein amino acid alkylation;0.0253616348603689!GO:0006479;protein amino acid methylation;0.0253616348603689!GO:0008250;oligosaccharyl transferase complex;0.0256474342668803!GO:0005669;transcription factor TFIID complex;0.0257414766782897!GO:0005521;lamin binding;0.0260624490704348!GO:0016408;C-acyltransferase activity;0.0265717783608312!GO:0030308;negative regulation of cell growth;0.0268880110593733!GO:0003988;acetyl-CoA C-acyltransferase activity;0.027492547127444!GO:0030833;regulation of actin filament polymerization;0.0276632305942371!GO:0046979;TAP2 binding;0.027935671072041!GO:0046977;TAP binding;0.027935671072041!GO:0046978;TAP1 binding;0.027935671072041!GO:0007346;regulation of progression through mitotic cell cycle;0.0279501027104733!GO:0019079;viral genome replication;0.0279953975770082!GO:0000152;nuclear ubiquitin ligase complex;0.0279953975770082!GO:0043284;biopolymer biosynthetic process;0.0280635003968566!GO:0045859;regulation of protein kinase activity;0.028220335312398!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0282324017609586!GO:0046483;heterocycle metabolic process;0.0290723946717437!GO:0006779;porphyrin biosynthetic process;0.0291868251248198!GO:0033014;tetrapyrrole biosynthetic process;0.0291868251248198!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0291868251248198!GO:0006984;ER-nuclear signaling pathway;0.0293757782716278!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0295046148491335!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0295475868421589!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0297164624934358!GO:0043022;ribosome binding;0.0298789154214783!GO:0006144;purine base metabolic process;0.0304480105030209!GO:0044262;cellular carbohydrate metabolic process;0.0304923779640477!GO:0006378;mRNA polyadenylation;0.0309972689552577!GO:0001836;release of cytochrome c from mitochondria;0.0309972689552577!GO:0008320;protein transmembrane transporter activity;0.0314547527474053!GO:0030041;actin filament polymerization;0.0315206602084449!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0317034302204983!GO:0042608;T cell receptor binding;0.0317175462450462!GO:0016570;histone modification;0.0317175462450462!GO:0006778;porphyrin metabolic process;0.0317175462450462!GO:0033013;tetrapyrrole metabolic process;0.0317175462450462!GO:0044450;microtubule organizing center part;0.0317194653749203!GO:0004221;ubiquitin thiolesterase activity;0.0323150276537502!GO:0004197;cysteine-type endopeptidase activity;0.0323202295242152!GO:0005832;chaperonin-containing T-complex;0.032403209640344!GO:0031570;DNA integrity checkpoint;0.0325074144947164!GO:0048524;positive regulation of viral reproduction;0.0326614437925847!GO:0030433;ER-associated protein catabolic process;0.0326614437925847!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0326614437925847!GO:0050852;T cell receptor signaling pathway;0.0327349240152313!GO:0018193;peptidyl-amino acid modification;0.032821086820755!GO:0005874;microtubule;0.0329135383678227!GO:0006914;autophagy;0.0330030658890977!GO:0043601;nuclear replisome;0.0330030658890977!GO:0030894;replisome;0.0330030658890977!GO:0000738;DNA catabolic process, exonucleolytic;0.0330030658890977!GO:0006355;regulation of transcription, DNA-dependent;0.0330591207597736!GO:0016790;thiolester hydrolase activity;0.0331344916910924!GO:0030119;AP-type membrane coat adaptor complex;0.0336953486317361!GO:0005083;small GTPase regulator activity;0.0339859230031978!GO:0006458;'de novo' protein folding;0.034146189526683!GO:0051084;'de novo' posttranslational protein folding;0.034146189526683!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0342703908575193!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0342703908575193!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.034804148014779!GO:0000018;regulation of DNA recombination;0.0350619040633079!GO:0017134;fibroblast growth factor binding;0.0350883051534728!GO:0006007;glucose catabolic process;0.0351669195670891!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0354388940242344!GO:0033673;negative regulation of kinase activity;0.0355369004991564!GO:0006469;negative regulation of protein kinase activity;0.0355369004991564!GO:0050811;GABA receptor binding;0.0361536310218902!GO:0048002;antigen processing and presentation of peptide antigen;0.0363974386446289!GO:0005784;translocon complex;0.0370538759951157!GO:0030258;lipid modification;0.0374870013953228!GO:0045061;thymic T cell selection;0.0374870013953228!GO:0000118;histone deacetylase complex;0.0375037456652148!GO:0000781;chromosome, telomeric region;0.0385412573977794!GO:0051053;negative regulation of DNA metabolic process;0.038731981310869!GO:0006270;DNA replication initiation;0.0390278708398831!GO:0022884;macromolecule transmembrane transporter activity;0.0390278708398831!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0390278708398831!GO:0000793;condensed chromosome;0.0391925464822761!GO:0000819;sister chromatid segregation;0.0392899541353606!GO:0000096;sulfur amino acid metabolic process;0.0393229475918287!GO:0006730;one-carbon compound metabolic process;0.0402009029431346!GO:0030131;clathrin adaptor complex;0.0404587483943471!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.040542845143733!GO:0019058;viral infectious cycle;0.040686340692024!GO:0008180;signalosome;0.0410391920276924!GO:0045926;negative regulation of growth;0.0411448783940872!GO:0051348;negative regulation of transferase activity;0.0412494066036437!GO:0001784;phosphotyrosine binding;0.0414644296077694!GO:0002440;production of molecular mediator of immune response;0.0414769659012226!GO:0019904;protein domain specific binding;0.0416479828630521!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0418889640889692!GO:0000725;recombinational repair;0.0424120579888308!GO:0000724;double-strand break repair via homologous recombination;0.0424120579888308!GO:0016860;intramolecular oxidoreductase activity;0.0424477692596455!GO:0045058;T cell selection;0.0424477692596455!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0424477692596455!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0424477692596455!GO:0008017;microtubule binding;0.0424477692596455!GO:0051452;cellular pH reduction;0.0425718117353131!GO:0051453;regulation of cellular pH;0.0425718117353131!GO:0045851;pH reduction;0.0425718117353131!GO:0005095;GTPase inhibitor activity;0.0427077453073659!GO:0045185;maintenance of protein localization;0.0431655719334681!GO:0006740;NADPH regeneration;0.0433194796978187!GO:0006098;pentose-phosphate shunt;0.0433194796978187!GO:0019318;hexose metabolic process;0.0433194796978187!GO:0006013;mannose metabolic process;0.0433353536925985!GO:0019976;interleukin-2 binding;0.0433836158146515!GO:0004911;interleukin-2 receptor activity;0.0433836158146515!GO:0005996;monosaccharide metabolic process;0.0437103023571289!GO:0003887;DNA-directed DNA polymerase activity;0.0439341181490395!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0443221459089763!GO:0030217;T cell differentiation;0.0444634398972537!GO:0007034;vacuolar transport;0.0446472479241718!GO:0030133;transport vesicle;0.0456624460454701!GO:0030332;cyclin binding;0.0456624460454701!GO:0006518;peptide metabolic process;0.0458885845786398!GO:0006406;mRNA export from nucleus;0.0469608518170093!GO:0006266;DNA ligation;0.0471811303836821!GO:0005652;nuclear lamina;0.0473934621598087!GO:0000070;mitotic sister chromatid segregation;0.0474296976344877!GO:0008538;proteasome activator activity;0.0475314156607214!GO:0008287;protein serine/threonine phosphatase complex;0.0481105024025959!GO:0050178;phenylpyruvate tautomerase activity;0.0487441200966178!GO:0051222;positive regulation of protein transport;0.0490101667963834!GO:0022406;membrane docking;0.0492513778418397!GO:0048278;vesicle docking;0.0492513778418397!GO:0000726;non-recombinational repair;0.0492513778418397!GO:0043280;positive regulation of caspase activity;0.0492513778418397!GO:0032813;tumor necrosis factor receptor superfamily binding;0.0498988548892301
|sample_id=11913
|sample_id=11913
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=ZBTB16:3.10727220461;PITX1..3:2.66996826321;CDX1,2,4:2.6620889513;PAX4:2.60977452963;IKZF2:2.46732325499;FOXP1:2.34144733851;ELF1,2,4:1.99009667139;POU1F1:1.9030619941;NKX6-1,2:1.88535562006;TOPORS:1.82293051267;PAX3,7:1.74768734853;RUNX1..3:1.68684234724;PDX1:1.56219804393;DMAP1_NCOR{1,2}_SMARC:1.55772207776;NKX3-1:1.45952461453;POU2F1..3:1.3143056485;ETS1,2:1.23135203023;IRF1,2:1.17917743702;SPI1:1.15408308611;FOXO1,3,4:1.00224303707;HOX{A6,A7,B6,B7}:0.992650642948;E2F1..5:0.961772716116;AIRE:0.927696287924;RORA:0.911372137604;BREu{core}:0.89354322687;TLX2:0.881243628239;STAT1,3:0.866170369798;SPZ1:0.856454868264;ELK1,4_GABP{A,B1}:0.828613955131;PBX1:0.820390878807;NKX2-2,8:0.806835451066;SPIB:0.779603929926;IRF7:0.747373919341;NKX2-1,4:0.691069792627;ZNF384:0.664633448765;FOXD3:0.660954713357;GATA6:0.633515516509;NFY{A,B,C}:0.565782742813;CRX:0.553555475401;TGIF1:0.523513449759;BPTF:0.518551988109;FOX{F1,F2,J1}:0.517863727663;OCT4_SOX2{dimer}:0.488487431031;YY1:0.468933879686;FOX{I1,J2}:0.399362192998;NR5A1,2:0.395292299694;SOX5:0.294698811336;NANOG{mouse}:0.27010829014;FOX{D1,D2}:0.234222497801;MYB:0.218895688984;ZEB1:0.207581589089;POU3F1..4:0.204175779189;PAX8:0.169682438383;EVI1:0.169500437086;SNAI1..3:0.127872188084;FOXA2:0.106029618867;CUX2:0.0950157444467;STAT2,4,6:0.081862635367;ALX1:0.0796258903566;FOXM1:0.0506655249756;NFKB1_REL_RELA:0.0412825757287;LMO2:0.00936086777515;CREB1:0.00776021677036;NRF1:0.00107134341135;PAX2:-0.018084604621;FOXP3:-0.0220933449017;MYOD1:-0.0281950463242;LEF1_TCF7_TCF7L1,2:-0.0357820825167;ZNF143:-0.0462040804004;DBP:-0.0462808798625;ATF5_CREB3:-0.0481790318378;HNF4A_NR2F1,2:-0.0811689792954;T:-0.09728256728;FOXQ1:-0.100596539008;GFI1:-0.109061203958;SREBF1,2:-0.127315592626;RREB1:-0.127573428675;HOXA9_MEIS1:-0.167894471271;HES1:-0.168264166409;STAT5{A,B}:-0.181606357493;FOXN1:-0.195020992622;ATF6:-0.199486957102;NR1H4:-0.215575811724;PAX6:-0.239232656171;NFIL3:-0.24677461759;SMAD1..7,9:-0.273080721553;SOX{8,9,10}:-0.274402778946;GCM1,2:-0.282184553759;AHR_ARNT_ARNT2:-0.285327000342;ARID5B:-0.290099055759;NR3C1:-0.332591210666;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.341704771104;HAND1,2:-0.34519606282;RFX2..5_RFXANK_RFXAP:-0.359293435425;AR:-0.364058982932;HNF1A:-0.380230079223;RXRA_VDR{dimer}:-0.403623491341;TFDP1:-0.418043262751;PRRX1,2:-0.418434303776;CDC5L:-0.433639444013;UFEwm:-0.439556612108;NR6A1:-0.443056845179;NFE2L1:-0.444963246368;JUN:-0.453464279361;POU5F1:-0.464088805795;MYFfamily:-0.478449773052;ATF2:-0.48427094641;HMX1:-0.503809799172;GLI1..3:-0.511616111107;HMGA1,2:-0.513556609378;NKX2-3_NKX2-5:-0.55381011164;PPARG:-0.55522987306;TAL1_TCF{3,4,12}:-0.564708684498;VSX1,2:-0.598253854338;ATF4:-0.598906626368;PAX5:-0.602255131901;SRF:-0.607039679235;NFATC1..3:-0.623276774826;ZNF238:-0.637836375821;TP53:-0.639756701958;CEBPA,B_DDIT3:-0.660180397392;LHX3,4:-0.684338089827;HBP1_HMGB_SSRP1_UBTF:-0.690799403506;ZNF148:-0.708758316793;SOX2:-0.709786260608;TFAP4:-0.713046971316;BACH2:-0.723506398494;ONECUT1,2:-0.732823108158;XCPE1{core}:-0.757733705208;EP300:-0.781434718167;FOS_FOS{B,L1}_JUN{B,D}:-0.786548618189;KLF4:-0.789767250262;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.813140357239;MZF1:-0.817580918437;REST:-0.826017958396;ZFP161:-0.85681167996;TFCP2:-0.859555365556;NFE2:-0.868702271784;PRDM1:-0.87229624853;ADNP_IRX_SIX_ZHX:-0.875451534963;FOSL2:-0.901985302533;ESR1:-0.918090672125;MEF2{A,B,C,D}:-0.922455122612;ALX4:-0.952591133159;GATA4:-0.991583457751;FOXL1:-0.994118127058;ZBTB6:-1.00384934711;MTE{core}:-1.0202975266;EGR1..3:-1.02305580507;EBF1:-1.02811075954;NFE2L2:-1.0468973784;MED-1{core}:-1.0529237271;HOX{A4,D4}:-1.06084202741;RFX1:-1.0659979143;ZNF423:-1.08654348235;GZF1:-1.09993823182;HLF:-1.10240200401;POU6F1:-1.10435122955;RBPJ:-1.12357410837;NHLH1,2:-1.15455665075;MYBL2:-1.17522916921;MTF1:-1.20039135168;PAX1,9:-1.20231610009;NANOG:-1.20615477456;SOX17:-1.2066693304;TEF:-1.21578937175;HIC1:-1.22139073672;bHLH_family:-1.22556944046;HIF1A:-1.28050359024;MAZ:-1.28357833232;GFI1B:-1.31821823594;TFAP2B:-1.3256739098;HOX{A5,B5}:-1.33063525694;MAFB:-1.34112454738;HSF1,2:-1.34658156121;GTF2I:-1.36768639024;GTF2A1,2:-1.37503220836;NFIX:-1.40837829442;TBP:-1.43601700982;NKX3-2:-1.46964534205;ZIC1..3:-1.48420554546;PATZ1:-1.49128640191;TEAD1:-1.59779680547;EN1,2:-1.6445482097;TFAP2{A,C}:-1.69185189905;TBX4,5:-1.70626905754;IKZF1:-1.71312242476;RXR{A,B,G}:-1.78749843524;SP1:-1.80403464347;ESRRA:-1.88170398626;XBP1:-1.95923722161;TLX1..3_NFIC{dimer}:-2.14489914786
|top_motifs=ZBTB16:3.10727220461;PITX1..3:2.66996826321;CDX1,2,4:2.6620889513;PAX4:2.60977452963;IKZF2:2.46732325499;FOXP1:2.34144733851;ELF1,2,4:1.99009667139;POU1F1:1.9030619941;NKX6-1,2:1.88535562006;TOPORS:1.82293051267;PAX3,7:1.74768734853;RUNX1..3:1.68684234724;PDX1:1.56219804393;DMAP1_NCOR{1,2}_SMARC:1.55772207776;NKX3-1:1.45952461453;POU2F1..3:1.3143056485;ETS1,2:1.23135203023;IRF1,2:1.17917743702;SPI1:1.15408308611;FOXO1,3,4:1.00224303707;HOX{A6,A7,B6,B7}:0.992650642948;E2F1..5:0.961772716116;AIRE:0.927696287924;RORA:0.911372137604;BREu{core}:0.89354322687;TLX2:0.881243628239;STAT1,3:0.866170369798;SPZ1:0.856454868264;ELK1,4_GABP{A,B1}:0.828613955131;PBX1:0.820390878807;NKX2-2,8:0.806835451066;SPIB:0.779603929926;IRF7:0.747373919341;NKX2-1,4:0.691069792627;ZNF384:0.664633448765;FOXD3:0.660954713357;GATA6:0.633515516509;NFY{A,B,C}:0.565782742813;CRX:0.553555475401;TGIF1:0.523513449759;BPTF:0.518551988109;FOX{F1,F2,J1}:0.517863727663;OCT4_SOX2{dimer}:0.488487431031;YY1:0.468933879686;FOX{I1,J2}:0.399362192998;NR5A1,2:0.395292299694;SOX5:0.294698811336;NANOG{mouse}:0.27010829014;FOX{D1,D2}:0.234222497801;MYB:0.218895688984;ZEB1:0.207581589089;POU3F1..4:0.204175779189;PAX8:0.169682438383;EVI1:0.169500437086;SNAI1..3:0.127872188084;FOXA2:0.106029618867;CUX2:0.0950157444467;STAT2,4,6:0.081862635367;ALX1:0.0796258903566;FOXM1:0.0506655249756;NFKB1_REL_RELA:0.0412825757287;LMO2:0.00936086777515;CREB1:0.00776021677036;NRF1:0.00107134341135;PAX2:-0.018084604621;FOXP3:-0.0220933449017;MYOD1:-0.0281950463242;LEF1_TCF7_TCF7L1,2:-0.0357820825167;ZNF143:-0.0462040804004;DBP:-0.0462808798625;ATF5_CREB3:-0.0481790318378;HNF4A_NR2F1,2:-0.0811689792954;T:-0.09728256728;FOXQ1:-0.100596539008;GFI1:-0.109061203958;SREBF1,2:-0.127315592626;RREB1:-0.127573428675;HOXA9_MEIS1:-0.167894471271;HES1:-0.168264166409;STAT5{A,B}:-0.181606357493;FOXN1:-0.195020992622;ATF6:-0.199486957102;NR1H4:-0.215575811724;PAX6:-0.239232656171;NFIL3:-0.24677461759;SMAD1..7,9:-0.273080721553;SOX{8,9,10}:-0.274402778946;GCM1,2:-0.282184553759;AHR_ARNT_ARNT2:-0.285327000342;ARID5B:-0.290099055759;NR3C1:-0.332591210666;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.341704771104;HAND1,2:-0.34519606282;RFX2..5_RFXANK_RFXAP:-0.359293435425;AR:-0.364058982932;HNF1A:-0.380230079223;RXRA_VDR{dimer}:-0.403623491341;TFDP1:-0.418043262751;PRRX1,2:-0.418434303776;CDC5L:-0.433639444013;UFEwm:-0.439556612108;NR6A1:-0.443056845179;NFE2L1:-0.444963246368;JUN:-0.453464279361;POU5F1:-0.464088805795;MYFfamily:-0.478449773052;ATF2:-0.48427094641;HMX1:-0.503809799172;GLI1..3:-0.511616111107;HMGA1,2:-0.513556609378;NKX2-3_NKX2-5:-0.55381011164;PPARG:-0.55522987306;TAL1_TCF{3,4,12}:-0.564708684498;VSX1,2:-0.598253854338;ATF4:-0.598906626368;PAX5:-0.602255131901;SRF:-0.607039679235;NFATC1..3:-0.623276774826;ZNF238:-0.637836375821;TP53:-0.639756701958;CEBPA,B_DDIT3:-0.660180397392;LHX3,4:-0.684338089827;HBP1_HMGB_SSRP1_UBTF:-0.690799403506;ZNF148:-0.708758316793;SOX2:-0.709786260608;TFAP4:-0.713046971316;BACH2:-0.723506398494;ONECUT1,2:-0.732823108158;XCPE1{core}:-0.757733705208;EP300:-0.781434718167;FOS_FOS{B,L1}_JUN{B,D}:-0.786548618189;KLF4:-0.789767250262;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.813140357239;MZF1:-0.817580918437;REST:-0.826017958396;ZFP161:-0.85681167996;TFCP2:-0.859555365556;NFE2:-0.868702271784;PRDM1:-0.87229624853;ADNP_IRX_SIX_ZHX:-0.875451534963;FOSL2:-0.901985302533;ESR1:-0.918090672125;MEF2{A,B,C,D}:-0.922455122612;ALX4:-0.952591133159;GATA4:-0.991583457751;FOXL1:-0.994118127058;ZBTB6:-1.00384934711;MTE{core}:-1.0202975266;EGR1..3:-1.02305580507;EBF1:-1.02811075954;NFE2L2:-1.0468973784;MED-1{core}:-1.0529237271;HOX{A4,D4}:-1.06084202741;RFX1:-1.0659979143;ZNF423:-1.08654348235;GZF1:-1.09993823182;HLF:-1.10240200401;POU6F1:-1.10435122955;RBPJ:-1.12357410837;NHLH1,2:-1.15455665075;MYBL2:-1.17522916921;MTF1:-1.20039135168;PAX1,9:-1.20231610009;NANOG:-1.20615477456;SOX17:-1.2066693304;TEF:-1.21578937175;HIC1:-1.22139073672;bHLH_family:-1.22556944046;HIF1A:-1.28050359024;MAZ:-1.28357833232;GFI1B:-1.31821823594;TFAP2B:-1.3256739098;HOX{A5,B5}:-1.33063525694;MAFB:-1.34112454738;HSF1,2:-1.34658156121;GTF2I:-1.36768639024;GTF2A1,2:-1.37503220836;NFIX:-1.40837829442;TBP:-1.43601700982;NKX3-2:-1.46964534205;ZIC1..3:-1.48420554546;PATZ1:-1.49128640191;TEAD1:-1.59779680547;EN1,2:-1.6445482097;TFAP2{A,C}:-1.69185189905;TBX4,5:-1.70626905754;IKZF1:-1.71312242476;RXR{A,B,G}:-1.78749843524;SP1:-1.80403464347;ESRRA:-1.88170398626;XBP1:-1.95923722161;TLX1..3_NFIC{dimer}:-2.14489914786
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11913-125G5;search_select_hide=table117:FF:11913-125G5
}}
}}

Latest revision as of 18:29, 4 June 2020

Name:CD4+CD25-CD45RA+ naive conventional T cells expanded, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13813
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age23
cell typeT cell
cell lineNA
companyNA
collaborationMichael Rehli (University of Regensberg)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number53-54
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005773
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13813 CAGE DRX008188 DRR009060
Accession ID Hg19

Library idBAMCTSS
CNhs13813 DRZ000485 DRZ001870
Accession ID Hg38

Library idBAMCTSS
CNhs13813 DRZ011835 DRZ013220
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.0661
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0235
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.322
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.123
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.0661
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0661
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0.0661
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.174
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.0601
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.281
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.125
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.716
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0709
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.061
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0661
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.187
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.0661
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.797
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.878
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.546
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.449
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.282
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.51
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.365
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0661
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0612
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.306
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.154
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.144
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.995
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.85
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13813

Jaspar motifP-value
MA0002.21.91686e-5
MA0003.10.79
MA0004.10.742
MA0006.10.515
MA0007.10.951
MA0009.10.488
MA0014.10.896
MA0017.10.29
MA0018.20.445
MA0019.10.0568
MA0024.10.0591
MA0025.10.0779
MA0027.10.408
MA0028.16.95e-4
MA0029.10.415
MA0030.10.126
MA0031.10.965
MA0035.20.315
MA0038.10.0712
MA0039.20.489
MA0040.10.177
MA0041.10.204
MA0042.10.41
MA0043.10.0423
MA0046.10.0366
MA0047.20.825
MA0048.10.608
MA0050.16.58875e-7
MA0051.10.0137
MA0052.10.0109
MA0055.10.626
MA0057.10.78
MA0058.10.842
MA0059.10.48
MA0060.10.722
MA0061.10.0911
MA0062.21.4193e-9
MA0065.20.0697
MA0066.10.379
MA0067.10.879
MA0068.10.618
MA0069.10.893
MA0070.10.582
MA0071.10.558
MA0072.10.865
MA0073.10.845
MA0074.10.738
MA0076.11.19712e-4
MA0077.10.0652
MA0078.10.933
MA0079.20.291
MA0080.28.23117e-9
MA0081.10.0874
MA0083.10.0545
MA0084.10.877
MA0087.10.385
MA0088.10.0508
MA0090.10.00169
MA0091.10.928
MA0092.10.838
MA0093.10.665
MA0099.27.40104e-6
MA0100.10.708
MA0101.10.617
MA0102.20.173
MA0103.10.0713
MA0104.20.276
MA0105.12.20974e-5
MA0106.10.941
MA0107.10.278
MA0108.23.27146e-10
MA0111.10.054
MA0112.20.12
MA0113.10.956
MA0114.10.25
MA0115.10.536
MA0116.13.39379e-5
MA0117.10.993
MA0119.10.853
MA0122.10.825
MA0124.10.428
MA0125.10.399
MA0131.10.201
MA0135.10.0208
MA0136.12.27431e-14
MA0137.20.696
MA0138.20.294
MA0139.10.0281
MA0140.10.577
MA0141.10.564
MA0142.10.276
MA0143.10.112
MA0144.10.965
MA0145.10.512
MA0146.10.104
MA0147.10.23
MA0148.10.58
MA0149.10.0443
MA0150.10.164
MA0152.10.0462
MA0153.10.0946
MA0154.10.0362
MA0155.10.551
MA0156.11.48867e-10
MA0157.10.563
MA0159.10.462
MA0160.10.67
MA0162.10.873
MA0163.13.19359e-12
MA0164.10.985
MA0258.10.0195
MA0259.10.497



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13813

Novel motifP-value
10.0707
100.00359
1000.423
1010.0518
1020.571
1030.775
1040.741
1050.409
1060.299
1070.725
1080.886
1090.12
110.0323
1100.336
1110.222
1120.274
1130.29
1140.413
1150.155
1160.342
1170.0031
1180.41
1190.277
120.721
1200.749
1210.781
1220.863
1232.38734e-7
1240.156
1250.834
1260.793
1270.719
1280.525
1290.381
130.328
1300.569
1310.634
1320.48
1330.459
1340.51
1350.639
1360.827
1370.355
1380.192
1390.267
140.473
1400.046
1410.472
1420.62
1430.0133
1440.362
1450.106
1460.831
1470.187
1480.059
1490.884
150.233
1500.487
1510.582
1520.175
1530.991
1540.389
1550.0646
1560.746
1570.299
1580.187
1590.957
160.651
1600.3
1610.0627
1620.503
1630.241
1640.0988
1650.622
1660.913
1670.134
1680.734
1690.251
170.796
180.995
190.794
20.922
200.556
210.143
220.8
230.755
240.939
250.185
260.0342
270.324
280.661
290.0288
30.0342
300.0806
310.96
320.537
330.648
340.98
350.22
360.0229
370.309
380.537
390.597
40.945
400.348
410.878
420.0891
430.331
440.322
450.375
460.0767
470.018
480.0446
490.0638
50.777
500.953
510.686
520.436
530.0916
540.755
550.648
560.375
570.108
580.15
590.542
60.433
600.506
610.181
620.0776
630.338
640.109
650.726
660.746
670.608
680.939
690.928
70.363
700.124
710.0344
720.216
730.688
740.596
750.00928
760.214
770.723
780.0285
790.668
80.328
800.546
810.391
820.109
830.409
840.0366
850.919
860.206
870.993
880.841
890.315
90.862
900.0526
910.377
920.406
930.487
940.146
950.0436
960.2
970.19
980.346
990.452



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13813


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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