Personal tools

FF:12189-129B2: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(27 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=RNA-Seq@SAMD00013679
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000236,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000826,CL:0000837,CL:0000838,CL:0000945,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371
|accession_numbers=CAGE;DRX008050;DRR008922;DRZ000347;DRZ001732;DRZ011697;DRZ013082!RNA-Seq;DRX012341;DRR013789;DRZ002990;
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000945,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000236
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000025
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
|expression_enrichment_score=
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 35: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD19%252b%2520B%2520Cells%2520%2528pluriselect%2529%252c%2520donor090309%252c%2520donation1.CNhs12177.12189-129B2.hg38.nobarcode.ctss.bed.gz
|id=FF:12189-129B2
|id=FF:12189-129B2
|is_a=EFO:0002091;;FF:0000002;;FF:0000025;;FF:0000210
|is_a=EFO:0002091;;FF:0000025;;FF:0000210
|is_obsolete=
|library_id=CNhs12177!RDhi10007
|library_id_phase_based=2:CNhs12177
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12189
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12189
|name=CD19+ B Cells (pluriselect), donor090309, donation1
|name=CD19+ B Cells (pluriselect), donor090309, donation1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12177,LSID975,release011,COMPLETED
|profile_hcage=CNhs12177,LSID975,release011,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,1.3780254433354,0,0,0,0,0,-0.160318030086386,0.797951852219577,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.440903172569491,0,0,-0.153323010348428,0,0,0,0,0.440903172569491,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.317954060866147,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.440903172569491,0,-0.0667032191712947,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0815818795468414,-0.44264157794889,0,0,0,-0.219728284230998,-0.211197402695869,0,0,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124077992362285,0,0,0,-0.214235699061028,-0.399573366065725,0,0,0,0,0,0
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,-0.247178875285564,0,-0.474086218752008,-0.143515142523472,0,0,-0.0997134779624546,0,0,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0.440903172569491,0,0,0,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,-0.270240669334324,0,0.32002368877575,-0.0827201683234173,0,-0.69413176256992,0.0987060562447564,0,0,0,-0.395125843751124,-1.01837891339289,0,0.440903172569491,-0.121779851751874,0.146215990386457,0,0,-0.391044581551635,0,0.0898456705168594,0.160011844387875,0,-0.162458694256258,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.113914575890522,-0.0304099808375785,0,0,-0.0806172781120618,0.232543109095235,0,-0.100085579878484,-0.373286155956567,-0.350736013296859,0.042964726361435,0.254197508229279,0,0.602858207186491,-0.139066424605411,-0.485524693531572,-0.222942090842468,-0.147401849371139,-0.189981719549847,-0.156132999089005,-0.543118516655914,-0.786272629114012,-0.244205207693025,0.152647973973389,-0.064274038000941,-1.2314085082871,-0.16440739387314,0,0,-0.0775089264793031,-0.324240614667939,0,-0.115191850483145,-0.490114714476774,-0.042411915844674,-0.67098743647571,-0.881500983864423,-0.330776631022484,0.0394244021985262,-0.0395325284566706,0.197694764997637,-0.141144893349156,-0.4215723249037,0,0,-0.061166181882032,-0.17292354551765,-0.345008934537832,0.898446891059092,-0.0719640516726346,-0.0430742892414901,-0.0683442610773682,0,-0.664041151532495,-0.113808833835518,0,-0.211137053150381,-0.137874058301921,0,0,0,0,0,0.0766869229457419,0.585003510347108,0.830093806998065,0,-0.0328549159104753,0,0.337466007277366,0,0.0613032607982785,0,0.112162890460679,-0.292633804596236,0,-0.155663703089998,-0.696661868948113,-0.164990696339003,-0.422394805391737,-0.0584468268118252,0.539032241484174,-0.0532494338560938,-0.219728284230998,-0.788939864790226,-0.124307696593413,-0.0881268324752877,-0.210162025788965,-0.44264157794889,-0.238594959052034,-0.121759644910338,-0.363078317944826,0,-0.0544532824226036,0,0.172763924383906,0,0.528942984419278,-0.54043375147324,1.19658725782331,-0.0543719716748714,0,-0.0466378258724787,0.274818430779636,0,-0.286388383046103,-0.0681933196120457,0,-0.150367083334639,-0.697695966512583,0.568539148180729,0.188576152267921,0,-0.790080158389657,0,0,-0.269703376754119,-0.235476037764389,0,-0.211583492333716,-0.609202914213396,-0.604216041195295,-0.115971073434934,0,0,-0.204797165423234,0,0,-0.60592806381803,-0.176490564987516,-0.619783323958633,0.401804876407476,-0.17801050897194,-0.108622809454255,0,0,-0.177527765965176,0.440903172569491,-0.174994443755921,0,0,-0.0294297103140785,-0.116628112990133,0,0.327565608947116,0,-0.195265690557764,0,0,0,0,0,0,0,0.174238925664078,-0.354833330216448,0,-0.253165347322872,0,0,0,0,0,0,0,0,-1.59233083881968,-0.174255331009904,0.31788575689307,0,0,0,0,0.225179770016016,-0.203236562094724,0,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,-0.302632206172205,0,0,0,-0.27695440160179,0,0,0,0,0.440267449566335,0,0,-0.63193017338638,0,-0.178315348657873,-0.0815818795468414,0,0.029139277247336,0.112993697183134,-1.30962034064846,0,0,-0.261347131789888,0,0,-0.130696387436843,0,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,0.0519248705090976,-0.0922240566585104,-0.0640596705171081,0,0,0,0,0,0,-0.0241060230789031,-0.506542163561309,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,1.3780254433354,0,0,0,0.317584086534043,-0.772573722797745,0,0,0,0,0,0.797951852219577,0,-0.27483329820609,0,0,0,0,1.37634614405621,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327565608947116,0,0,0,-0.135919007235712,-0.0247755787802223,-0.28720751597291,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137338450879849,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.797780625835227,0,0,0,0,0,0,-0.287976840656709,-0.283220399823148,-0.170214858033552,0,0,0,-0.054385572482455,0.440903172569491,0,-0.0435359489311429,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0.220451586284746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0340113632754165,0.440903172569491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220451586284746,0,0,0,0,0,-0.0800184682686384,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.405428866950395,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.109600869946222,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,0.131253341253675,0,0,0,0,0,0,0,0,0,0,0,0.440903172569491,0,-0.253610608288505,0,0,-0.318028478722954,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17506114376343,-0.231267024101632,-0.399573366065725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317664061086855,0,0,0.440903172569491,0,0,0,0,0,0,0,0.440903172569491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19075466391207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.440903172569491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.620396418749604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248155984724569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.157236414286507,0,0,0,0,0,0,0,-0.122695996997001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188735000236362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0986506902111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0,0,0,0,0,0,0,0,0,0,0.286315517419308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454652024989245,0,0,0.612843749417116,0,-0.212667710108263,-0.0132927357882786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0400762477245316,0,0,-0.137338502423895,0,0,0,0,0,0,0.440903172569491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160831077246525,0,0,0.0438284840474758,0,0,0.198393604373623,0,0,0,0,0,-0.174992895090299,0.813547759284415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0408295247396738,0,0,0,-0.0568589461625992,1.13943347949158,0,-0.378836254350424,0,0,-0.630146564679475,0,0,0,-0.0959594073735869
|rna_box=129
|rna_box=129
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 79:
|rna_weight_ug=1.26575
|rna_weight_ug=1.26575
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.05047487593927e-205!GO:0043227;membrane-bound organelle;1.0596010931349e-185!GO:0043231;intracellular membrane-bound organelle;2.24372876984498e-185!GO:0043226;organelle;9.04803641727746e-172!GO:0043229;intracellular organelle;2.53975363227452e-171!GO:0005737;cytoplasm;3.5735246873938e-131!GO:0044422;organelle part;2.13738012328962e-112!GO:0044446;intracellular organelle part;1.33966121605593e-110!GO:0044444;cytoplasmic part;2.58353932505496e-100!GO:0032991;macromolecular complex;1.71470054320699e-99!GO:0044237;cellular metabolic process;2.40244902805994e-88!GO:0005634;nucleus;8.91919358736044e-88!GO:0043170;macromolecule metabolic process;8.26848646146123e-85!GO:0044238;primary metabolic process;2.37566664089188e-84!GO:0030529;ribonucleoprotein complex;1.17114507160883e-83!GO:0003723;RNA binding;2.01524159347579e-73!GO:0044428;nuclear part;3.86497902612995e-72!GO:0043233;organelle lumen;1.09481316455109e-66!GO:0031974;membrane-enclosed lumen;1.09481316455109e-66!GO:0005739;mitochondrion;2.96249233216864e-62!GO:0010467;gene expression;1.01843684887737e-56!GO:0043283;biopolymer metabolic process;1.78531104739084e-56!GO:0006396;RNA processing;3.02428844679951e-54!GO:0006412;translation;2.10649376858712e-52!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.66891645297268e-52!GO:0043234;protein complex;1.44054099964223e-50!GO:0005840;ribosome;1.9413283359197e-48!GO:0005515;protein binding;1.89889599374374e-44!GO:0031981;nuclear lumen;2.82924260600013e-43!GO:0016071;mRNA metabolic process;4.00791481378839e-43!GO:0033036;macromolecule localization;4.08752503699366e-43!GO:0044429;mitochondrial part;1.90154640592546e-42!GO:0015031;protein transport;4.03147586959149e-42!GO:0003735;structural constituent of ribosome;7.15627921371832e-42!GO:0019538;protein metabolic process;1.47913171240954e-41!GO:0045184;establishment of protein localization;8.29646225552921e-41!GO:0008104;protein localization;2.60438060957889e-40!GO:0008380;RNA splicing;7.3004146291985e-40!GO:0044267;cellular protein metabolic process;8.60569084646196e-40!GO:0031090;organelle membrane;2.06902420213252e-39!GO:0044260;cellular macromolecule metabolic process;8.8815560244825e-39!GO:0033279;ribosomal subunit;9.92266568695566e-38!GO:0031967;organelle envelope;1.11421754993606e-37!GO:0006397;mRNA processing;1.8962110640494e-37!GO:0031975;envelope;2.17330308108472e-37!GO:0009059;macromolecule biosynthetic process;3.06855463489447e-37!GO:0003676;nucleic acid binding;5.1186460227048e-36!GO:0005829;cytosol;4.19254744788336e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.4418218586709e-32!GO:0044249;cellular biosynthetic process;9.25989240782609e-32!GO:0009058;biosynthetic process;2.71380149164568e-31!GO:0005654;nucleoplasm;4.51919477384371e-29!GO:0046907;intracellular transport;6.23195376938933e-29!GO:0016070;RNA metabolic process;8.04303917425574e-29!GO:0005681;spliceosome;2.19943813479245e-28!GO:0065003;macromolecular complex assembly;3.84719050704485e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.39136536264299e-28!GO:0006886;intracellular protein transport;1.16867889599196e-27!GO:0006259;DNA metabolic process;2.41032236591836e-26!GO:0019866;organelle inner membrane;5.66021827955459e-26!GO:0044445;cytosolic part;1.38261419783312e-25!GO:0005740;mitochondrial envelope;2.51763726268316e-25!GO:0016043;cellular component organization and biogenesis;3.30948652163812e-25!GO:0031966;mitochondrial membrane;2.6950058233237e-24!GO:0022607;cellular component assembly;6.67013737399761e-24!GO:0005743;mitochondrial inner membrane;1.03833981292496e-23!GO:0044451;nucleoplasm part;2.3960474846485e-22!GO:0006119;oxidative phosphorylation;1.8558836930611e-21!GO:0051649;establishment of cellular localization;2.61696530833928e-21!GO:0051641;cellular localization;5.8849269972925e-21!GO:0006512;ubiquitin cycle;6.63423568028626e-21!GO:0006996;organelle organization and biogenesis;2.01017211333773e-20!GO:0015935;small ribosomal subunit;2.36486146795621e-20!GO:0022618;protein-RNA complex assembly;4.17139428207555e-20!GO:0031980;mitochondrial lumen;7.96599396479156e-20!GO:0005759;mitochondrial matrix;7.96599396479156e-20!GO:0000166;nucleotide binding;2.05851469056215e-19!GO:0044455;mitochondrial membrane part;5.43072304082718e-19!GO:0044265;cellular macromolecule catabolic process;1.01957809909778e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.11988470665304e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;1.36391609270932e-18!GO:0016462;pyrophosphatase activity;1.66145752165942e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.88067672855989e-18!GO:0019941;modification-dependent protein catabolic process;1.91528843263476e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.91528843263476e-18!GO:0015934;large ribosomal subunit;1.91528843263476e-18!GO:0017111;nucleoside-triphosphatase activity;3.35941196005546e-18!GO:0044257;cellular protein catabolic process;3.42834096372074e-18!GO:0006511;ubiquitin-dependent protein catabolic process;3.72212112251841e-18!GO:0043285;biopolymer catabolic process;4.65441539815959e-18!GO:0016874;ligase activity;1.89540691759314e-17!GO:0043228;non-membrane-bound organelle;3.86900982459745e-17!GO:0043232;intracellular non-membrane-bound organelle;3.86900982459745e-17!GO:0008134;transcription factor binding;6.84435655878174e-17!GO:0006605;protein targeting;2.15709250944719e-16!GO:0006974;response to DNA damage stimulus;2.23116378645203e-16!GO:0005746;mitochondrial respiratory chain;2.52834655188619e-16!GO:0016604;nuclear body;3.97392175086281e-16!GO:0005730;nucleolus;4.41277049733754e-16!GO:0006457;protein folding;5.29887360862272e-16!GO:0006915;apoptosis;7.28042067722255e-16!GO:0012501;programmed cell death;7.7307284979407e-16!GO:0009057;macromolecule catabolic process;1.3297326391765e-15!GO:0008135;translation factor activity, nucleic acid binding;4.66536838669885e-15!GO:0012505;endomembrane system;5.08820988272718e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.76225758777869e-15!GO:0000502;proteasome complex (sensu Eukaryota);6.78333541923714e-15!GO:0008219;cell death;1.56953419253341e-14!GO:0016265;death;1.56953419253341e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.56953419253341e-14!GO:0003954;NADH dehydrogenase activity;1.56953419253341e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.56953419253341e-14!GO:0005761;mitochondrial ribosome;1.94941377740651e-14!GO:0000313;organellar ribosome;1.94941377740651e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.3892841304885e-14!GO:0030163;protein catabolic process;2.902854757095e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.94793847301286e-14!GO:0000375;RNA splicing, via transesterification reactions;2.94793847301286e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.94793847301286e-14!GO:0016887;ATPase activity;3.40587360188467e-14!GO:0043412;biopolymer modification;3.82752758557228e-14!GO:0044248;cellular catabolic process;6.74304479552642e-14!GO:0032553;ribonucleotide binding;6.74304479552642e-14!GO:0032555;purine ribonucleotide binding;6.74304479552642e-14!GO:0042623;ATPase activity, coupled;1.08754064172658e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.59029680889849e-13!GO:0006281;DNA repair;1.96134547380277e-13!GO:0017076;purine nucleotide binding;2.50369207382415e-13!GO:0005635;nuclear envelope;5.30243322745412e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;5.40594969253505e-13!GO:0016607;nuclear speck;5.972739772858e-13!GO:0042775;organelle ATP synthesis coupled electron transport;7.4341929499512e-13!GO:0042773;ATP synthesis coupled electron transport;7.4341929499512e-13!GO:0006413;translational initiation;9.32283433768852e-13!GO:0042254;ribosome biogenesis and assembly;9.7950250017253e-13!GO:0005524;ATP binding;1.0346295572457e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.11501199382145e-12!GO:0045271;respiratory chain complex I;1.11501199382145e-12!GO:0005747;mitochondrial respiratory chain complex I;1.11501199382145e-12!GO:0031965;nuclear membrane;1.24641959048265e-12!GO:0006323;DNA packaging;1.93276727559456e-12!GO:0032559;adenyl ribonucleotide binding;2.1623144092924e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.53811076304589e-12!GO:0051276;chromosome organization and biogenesis;3.84336518948092e-12!GO:0006446;regulation of translational initiation;5.01693756227081e-12!GO:0006464;protein modification process;7.82383849319708e-12!GO:0030554;adenyl nucleotide binding;1.10627408663723e-11!GO:0003743;translation initiation factor activity;1.32754523484249e-11!GO:0003712;transcription cofactor activity;2.10010430448805e-11!GO:0006913;nucleocytoplasmic transport;3.00697668423934e-11!GO:0043687;post-translational protein modification;3.08519693385419e-11!GO:0051082;unfolded protein binding;3.9486022101623e-11!GO:0051169;nuclear transport;4.86400742946653e-11!GO:0005694;chromosome;5.73171928611146e-11!GO:0048770;pigment granule;6.70830659840189e-11!GO:0042470;melanosome;6.70830659840189e-11!GO:0042981;regulation of apoptosis;6.76412052782486e-11!GO:0009719;response to endogenous stimulus;9.8868009717676e-11!GO:0043067;regulation of programmed cell death;1.06495766434463e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.45880459951958e-10!GO:0051186;cofactor metabolic process;1.88696164461552e-10!GO:0050794;regulation of cellular process;2.88262622759279e-10!GO:0004386;helicase activity;3.44189514879628e-10!GO:0008639;small protein conjugating enzyme activity;3.62080033365861e-10!GO:0006333;chromatin assembly or disassembly;4.30318643072008e-10!GO:0004842;ubiquitin-protein ligase activity;4.91850017280924e-10!GO:0048193;Golgi vesicle transport;5.74341268382388e-10!GO:0015078;hydrogen ion transmembrane transporter activity;6.8460101192112e-10!GO:0017038;protein import;7.27218899288923e-10!GO:0044453;nuclear membrane part;7.9176056068783e-10!GO:0009259;ribonucleotide metabolic process;8.13182504582855e-10!GO:0019787;small conjugating protein ligase activity;9.05818882187498e-10!GO:0019829;cation-transporting ATPase activity;1.11739360118282e-09!GO:0007049;cell cycle;1.22687076264396e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.60303339584725e-09!GO:0019222;regulation of metabolic process;2.39762680045099e-09!GO:0009260;ribonucleotide biosynthetic process;4.03892820083709e-09!GO:0006163;purine nucleotide metabolic process;4.03892820083709e-09!GO:0008026;ATP-dependent helicase activity;4.46611551845458e-09!GO:0016568;chromatin modification;4.67322205335989e-09!GO:0006164;purine nucleotide biosynthetic process;5.0365575656913e-09!GO:0044427;chromosomal part;5.69121617495841e-09!GO:0016072;rRNA metabolic process;5.79736769297482e-09!GO:0016787;hydrolase activity;5.90545672460933e-09!GO:0005783;endoplasmic reticulum;5.90573636008283e-09!GO:0006364;rRNA processing;7.80712343367754e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.96000201623866e-09!GO:0065004;protein-DNA complex assembly;8.17939754765588e-09!GO:0005839;proteasome core complex (sensu Eukaryota);8.85610828997017e-09!GO:0009150;purine ribonucleotide metabolic process;9.74545859404181e-09!GO:0006399;tRNA metabolic process;1.09424423980748e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.17040763188122e-08!GO:0005643;nuclear pore;1.27278120454698e-08!GO:0044432;endoplasmic reticulum part;1.39052369423143e-08!GO:0030532;small nuclear ribonucleoprotein complex;1.59185891035603e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.73688022764402e-08!GO:0065002;intracellular protein transport across a membrane;2.36451659760341e-08!GO:0006732;coenzyme metabolic process;2.57980541531082e-08!GO:0005794;Golgi apparatus;2.58759963834951e-08!GO:0000785;chromatin;2.80635624267131e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.61430739606488e-08!GO:0004298;threonine endopeptidase activity;3.74803248092208e-08!GO:0015986;ATP synthesis coupled proton transport;4.85964569769632e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.85964569769632e-08!GO:0031323;regulation of cellular metabolic process;5.64694427576143e-08!GO:0003713;transcription coactivator activity;6.20212838262379e-08!GO:0016881;acid-amino acid ligase activity;6.23804070037382e-08!GO:0008565;protein transporter activity;7.38294821062385e-08!GO:0050657;nucleic acid transport;9.30380162015699e-08!GO:0051236;establishment of RNA localization;9.30380162015699e-08!GO:0050658;RNA transport;9.30380162015699e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.42250603734639e-08!GO:0006403;RNA localization;9.4569717996965e-08!GO:0016192;vesicle-mediated transport;9.54547335494416e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.42221307273185e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.54566351119434e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.54566351119434e-07!GO:0046930;pore complex;1.59821054039505e-07!GO:0009056;catabolic process;1.63468562998145e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.64176990344246e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.64176990344246e-07!GO:0009060;aerobic respiration;1.9123852306897e-07!GO:0022402;cell cycle process;1.9123852306897e-07!GO:0051246;regulation of protein metabolic process;2.08613631489192e-07!GO:0006754;ATP biosynthetic process;2.35144612746817e-07!GO:0006753;nucleoside phosphate metabolic process;2.35144612746817e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.51593786187822e-07!GO:0009141;nucleoside triphosphate metabolic process;2.61954116170122e-07!GO:0051726;regulation of cell cycle;2.64362401741842e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.75508035010304e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.75508035010304e-07!GO:0000074;regulation of progression through cell cycle;2.96016482924562e-07!GO:0006793;phosphorus metabolic process;3.36191162219425e-07!GO:0006796;phosphate metabolic process;3.36191162219425e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.56544986023907e-07!GO:0005789;endoplasmic reticulum membrane;4.72370397355396e-07!GO:0000245;spliceosome assembly;4.73948457179269e-07!GO:0046034;ATP metabolic process;6.19430585304802e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.63784835983981e-07!GO:0007005;mitochondrion organization and biogenesis;6.99603045152143e-07!GO:0006350;transcription;8.82252882402537e-07!GO:0043566;structure-specific DNA binding;9.81791428383238e-07!GO:0045333;cellular respiration;1.03980653362788e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.05038900412425e-06!GO:0006334;nucleosome assembly;1.12666136657124e-06!GO:0009055;electron carrier activity;1.20073191647606e-06!GO:0043069;negative regulation of programmed cell death;1.27632255840054e-06!GO:0031497;chromatin assembly;1.35711870513832e-06!GO:0050789;regulation of biological process;1.42714802896792e-06!GO:0045259;proton-transporting ATP synthase complex;1.61219849977311e-06!GO:0043066;negative regulation of apoptosis;1.620331336317e-06!GO:0016779;nucleotidyltransferase activity;1.67044724856291e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.74468330131442e-06!GO:0015399;primary active transmembrane transporter activity;1.74468330131442e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.79020584236633e-06!GO:0005768;endosome;1.87166874040235e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.90254380114035e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.04340161489679e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.04340161489679e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.04340161489679e-06!GO:0016310;phosphorylation;2.11832420121328e-06!GO:0010468;regulation of gene expression;2.48351499006053e-06!GO:0051028;mRNA transport;2.90950596722882e-06!GO:0006888;ER to Golgi vesicle-mediated transport;2.91905862842388e-06!GO:0008270;zinc ion binding;2.98909468963232e-06!GO:0051170;nuclear import;3.45026610949482e-06!GO:0043038;amino acid activation;3.91740268514818e-06!GO:0006418;tRNA aminoacylation for protein translation;3.91740268514818e-06!GO:0043039;tRNA aminoacylation;3.91740268514818e-06!GO:0006606;protein import into nucleus;5.07201831587378e-06!GO:0006461;protein complex assembly;5.21576929469411e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.39087715040439e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.14565415259567e-06!GO:0006613;cotranslational protein targeting to membrane;6.75227849696469e-06!GO:0005770;late endosome;7.15462939454523e-06!GO:0030120;vesicle coat;7.2334271932696e-06!GO:0030662;coated vesicle membrane;7.2334271932696e-06!GO:0009615;response to virus;7.39622484379806e-06!GO:0032446;protein modification by small protein conjugation;8.29743315634982e-06!GO:0006366;transcription from RNA polymerase II promoter;9.14572916498554e-06!GO:0016563;transcription activator activity;9.31477843913165e-06!GO:0000151;ubiquitin ligase complex;9.62268163863093e-06!GO:0003724;RNA helicase activity;9.92532176199472e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.01950794586789e-05!GO:0051188;cofactor biosynthetic process;1.13189596206109e-05!GO:0006099;tricarboxylic acid cycle;1.2162967711634e-05!GO:0046356;acetyl-CoA catabolic process;1.2162967711634e-05!GO:0006260;DNA replication;1.24000388454613e-05!GO:0006916;anti-apoptosis;1.25297827216685e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.32908279854e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.61113294922159e-05!GO:0005793;ER-Golgi intermediate compartment;1.65160739241838e-05!GO:0016564;transcription repressor activity;1.68058543808873e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;1.68658561694885e-05!GO:0048475;coated membrane;1.68658561694885e-05!GO:0030117;membrane coat;1.68658561694885e-05!GO:0016567;protein ubiquitination;1.86803121686562e-05!GO:0006084;acetyl-CoA metabolic process;1.88378715973009e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.19386227202259e-05!GO:0009117;nucleotide metabolic process;2.46795932227859e-05!GO:0007243;protein kinase cascade;2.47522844151341e-05!GO:0046914;transition metal ion binding;2.59039888402269e-05!GO:0045786;negative regulation of progression through cell cycle;2.68018191955886e-05!GO:0003697;single-stranded DNA binding;3.43030641366797e-05!GO:0031324;negative regulation of cellular metabolic process;3.45528669478491e-05!GO:0065009;regulation of a molecular function;3.99481594288075e-05!GO:0005762;mitochondrial large ribosomal subunit;4.32409575249992e-05!GO:0000315;organellar large ribosomal subunit;4.32409575249992e-05!GO:0006612;protein targeting to membrane;4.47172982283457e-05!GO:0006752;group transfer coenzyme metabolic process;4.87505250874059e-05!GO:0006417;regulation of translation;5.55807511755362e-05!GO:0019899;enzyme binding;5.58022503998734e-05!GO:0009109;coenzyme catabolic process;6.13290331182123e-05!GO:0009108;coenzyme biosynthetic process;6.32698009875441e-05!GO:0042613;MHC class II protein complex;6.44369920867488e-05!GO:0016740;transferase activity;6.8432448549299e-05!GO:0048523;negative regulation of cellular process;6.85756983450989e-05!GO:0006401;RNA catabolic process;7.09437907292109e-05!GO:0031072;heat shock protein binding;7.41313571876487e-05!GO:0005773;vacuole;7.45663657641208e-05!GO:0051187;cofactor catabolic process;7.64257186237575e-05!GO:0000323;lytic vacuole;0.000105439240409699!GO:0005764;lysosome;0.000105439240409699!GO:0043681;protein import into mitochondrion;0.000132296612978523!GO:0000278;mitotic cell cycle;0.000132607197040129!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000133081065635999!GO:0008632;apoptotic program;0.000144001803964875!GO:0032774;RNA biosynthetic process;0.000144740250412696!GO:0000314;organellar small ribosomal subunit;0.000149257971531069!GO:0005763;mitochondrial small ribosomal subunit;0.000149257971531069!GO:0045449;regulation of transcription;0.00015056634154633!GO:0043065;positive regulation of apoptosis;0.000155904064802205!GO:0000786;nucleosome;0.00016204647441985!GO:0005813;centrosome;0.000169439047541619!GO:0006351;transcription, DNA-dependent;0.000173260513264802!GO:0044431;Golgi apparatus part;0.000188415048322448!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.000190380959607328!GO:0008186;RNA-dependent ATPase activity;0.000192092029710654!GO:0006818;hydrogen transport;0.000196887561738188!GO:0051168;nuclear export;0.000197046326092722!GO:0016197;endosome transport;0.000198519358915242!GO:0016481;negative regulation of transcription;0.000211364166975293!GO:0015992;proton transport;0.000213354021244417!GO:0043068;positive regulation of programmed cell death;0.00021772930566083!GO:0031326;regulation of cellular biosynthetic process;0.000225907071337384!GO:0005885;Arp2/3 protein complex;0.000232762543890892!GO:0044440;endosomal part;0.000233113069166695!GO:0010008;endosome membrane;0.000233113069166695!GO:0042113;B cell activation;0.000250328026732726!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000325405816716343!GO:0022890;inorganic cation transmembrane transporter activity;0.000347650624875943!GO:0003714;transcription corepressor activity;0.000351000993807365!GO:0003899;DNA-directed RNA polymerase activity;0.000376505992850211!GO:0003924;GTPase activity;0.000381649630629845!GO:0008234;cysteine-type peptidase activity;0.000388534707405755!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000404265043158565!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000427725291564344!GO:0006917;induction of apoptosis;0.000441385528642555!GO:0003684;damaged DNA binding;0.000463406589394666!GO:0005815;microtubule organizing center;0.000468374809977793!GO:0065007;biological regulation;0.00047795717421922!GO:0006402;mRNA catabolic process;0.000497347280416674!GO:0004004;ATP-dependent RNA helicase activity;0.000580404793080703!GO:0012502;induction of programmed cell death;0.000592092893835805!GO:0043623;cellular protein complex assembly;0.000600134991211424!GO:0043021;ribonucleoprotein binding;0.000604503022242254!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000604693316640815!GO:0003690;double-stranded DNA binding;0.000621083332329733!GO:0009892;negative regulation of metabolic process;0.000627516565897678!GO:0007006;mitochondrial membrane organization and biogenesis;0.000661955281696314!GO:0048519;negative regulation of biological process;0.000672070084128551!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000791610156478626!GO:0045454;cell redox homeostasis;0.000875688748971979!GO:0006289;nucleotide-excision repair;0.000881636082688754!GO:0003729;mRNA binding;0.000971797968885975!GO:0009889;regulation of biosynthetic process;0.00100526598130607!GO:0006310;DNA recombination;0.00101449350919214!GO:0005667;transcription factor complex;0.00102093333375261!GO:0006839;mitochondrial transport;0.0010567591717084!GO:0007264;small GTPase mediated signal transduction;0.00107753261052174!GO:0006261;DNA-dependent DNA replication;0.00107753261052174!GO:0006383;transcription from RNA polymerase III promoter;0.00109853619935607!GO:0004518;nuclease activity;0.00110690004649548!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00115455177733596!GO:0015002;heme-copper terminal oxidase activity;0.00115455177733596!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00115455177733596!GO:0004129;cytochrome-c oxidase activity;0.00115455177733596!GO:0009165;nucleotide biosynthetic process;0.00136677997616531!GO:0016363;nuclear matrix;0.00136929636431446!GO:0008033;tRNA processing;0.00143146855543473!GO:0004527;exonuclease activity;0.0015224124673093!GO:0007265;Ras protein signal transduction;0.00152992219675471!GO:0051789;response to protein stimulus;0.0015415563229017!GO:0006986;response to unfolded protein;0.0015415563229017!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00157553178812046!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00157553178812046!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00157553178812046!GO:0005525;GTP binding;0.00161478217968237!GO:0005769;early endosome;0.00162984273166317!GO:0050790;regulation of catalytic activity;0.00164321203699457!GO:0031902;late endosome membrane;0.00164785138397609!GO:0006626;protein targeting to mitochondrion;0.00168030243422794!GO:0005048;signal sequence binding;0.00176829149718028!GO:0033116;ER-Golgi intermediate compartment membrane;0.00187198829027364!GO:0000087;M phase of mitotic cell cycle;0.00208456764023591!GO:0005798;Golgi-associated vesicle;0.00209973586851624!GO:0008654;phospholipid biosynthetic process;0.00213512105557506!GO:0048500;signal recognition particle;0.00232098344489848!GO:0043488;regulation of mRNA stability;0.00242276809341261!GO:0043487;regulation of RNA stability;0.00242276809341261!GO:0007242;intracellular signaling cascade;0.00243435263905992!GO:0006352;transcription initiation;0.00244055092786983!GO:0006091;generation of precursor metabolites and energy;0.00245283477618543!GO:0051252;regulation of RNA metabolic process;0.00249361829538955!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00256555339824566!GO:0006355;regulation of transcription, DNA-dependent;0.00265966832031479!GO:0003677;DNA binding;0.00267541044365301!GO:0016741;transferase activity, transferring one-carbon groups;0.00270917356147572!GO:0005684;U2-dependent spliceosome;0.00273884364875802!GO:0051427;hormone receptor binding;0.00279742864720003!GO:0008168;methyltransferase activity;0.00285700177246309!GO:0051920;peroxiredoxin activity;0.00290392634971114!GO:0007067;mitosis;0.00292858106284686!GO:0005637;nuclear inner membrane;0.00320504030793171!GO:0006891;intra-Golgi vesicle-mediated transport;0.00320504030793171!GO:0022403;cell cycle phase;0.00326984026561704!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00339965438424493!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00339965438424493!GO:0000139;Golgi membrane;0.00363109865874964!GO:0006302;double-strand break repair;0.00370357961487469!GO:0007034;vacuolar transport;0.0038199983958517!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00389800723572993!GO:0045047;protein targeting to ER;0.00389800723572993!GO:0048471;perinuclear region of cytoplasm;0.00404117492633903!GO:0004674;protein serine/threonine kinase activity;0.00418261168054476!GO:0004532;exoribonuclease activity;0.00439456478156859!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00439456478156859!GO:0051301;cell division;0.00455724425428405!GO:0035257;nuclear hormone receptor binding;0.00470235912027052!GO:0031625;ubiquitin protein ligase binding;0.00481195478561652!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00484868830265769!GO:0006414;translational elongation;0.00507415851405903!GO:0006950;response to stress;0.00519269724995837!GO:0009967;positive regulation of signal transduction;0.00520711171771862!GO:0008312;7S RNA binding;0.00524667300015577!GO:0003711;transcription elongation regulator activity;0.00529086216445185!GO:0047485;protein N-terminus binding;0.00545225684230769!GO:0016584;nucleosome positioning;0.00580804599830002!GO:0005774;vacuolar membrane;0.00618594391934802!GO:0042802;identical protein binding;0.00619071584642709!GO:0016251;general RNA polymerase II transcription factor activity;0.00619085001409!GO:0030658;transport vesicle membrane;0.00658834469972445!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0066864985626603!GO:0048522;positive regulation of cellular process;0.00682961922871929!GO:0016605;PML body;0.00684373242475874!GO:0006672;ceramide metabolic process;0.00700886719295912!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0070979301200932!GO:0045947;negative regulation of translational initiation;0.00735304972447423!GO:0030137;COPI-coated vesicle;0.00766611172737251!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00782505794320627!GO:0051336;regulation of hydrolase activity;0.00847926810522513!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.00858911791637038!GO:0016859;cis-trans isomerase activity;0.00876245403637626!GO:0030384;phosphoinositide metabolic process;0.00884515450232563!GO:0044452;nucleolar part;0.00886096215586063!GO:0030663;COPI coated vesicle membrane;0.00886148156359558!GO:0030126;COPI vesicle coat;0.00886148156359558!GO:0046474;glycerophospholipid biosynthetic process;0.00895200352867028!GO:0003725;double-stranded RNA binding;0.00902281426377766!GO:0006650;glycerophospholipid metabolic process;0.00904725866329607!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00906747411927933!GO:0045045;secretory pathway;0.00914142237251041!GO:0032940;secretion by cell;0.00954241446546612!GO:0046649;lymphocyte activation;0.00955264045127465!GO:0008408;3'-5' exonuclease activity;0.00981386727509763!GO:0004197;cysteine-type endopeptidase activity;0.00981434857138648!GO:0005657;replication fork;0.0103024289318992!GO:0008047;enzyme activator activity;0.0105674003390785!GO:0043281;regulation of caspase activity;0.010616526320661!GO:0044437;vacuolar part;0.0108145331152755!GO:0031252;leading edge;0.0108624228358341!GO:0050871;positive regulation of B cell activation;0.0108858099105362!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0109385652008857!GO:0032561;guanyl ribonucleotide binding;0.0112924142264964!GO:0019001;guanyl nucleotide binding;0.0112924142264964!GO:0009451;RNA modification;0.0115848187653335!GO:0030433;ER-associated protein catabolic process;0.0115848187653335!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0115848187653335!GO:0003746;translation elongation factor activity;0.0123695822400484!GO:0016272;prefoldin complex;0.0131776423908617!GO:0030518;steroid hormone receptor signaling pathway;0.0131776423908617!GO:0051539;4 iron, 4 sulfur cluster binding;0.0132004776449867!GO:0030660;Golgi-associated vesicle membrane;0.0132004776449867!GO:0031901;early endosome membrane;0.013324221294156!GO:0006376;mRNA splice site selection;0.0135545846340394!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0135545846340394!GO:0006405;RNA export from nucleus;0.0140879979323372!GO:0046519;sphingoid metabolic process;0.0142444341479716!GO:0006595;polyamine metabolic process;0.0147512828009345!GO:0006611;protein export from nucleus;0.0153190822377941!GO:0019843;rRNA binding;0.0154243940889492!GO:0006284;base-excision repair;0.0155372421003012!GO:0008022;protein C-terminus binding;0.0163172215748624!GO:0015923;mannosidase activity;0.0163958537512883!GO:0000178;exosome (RNase complex);0.0166065037351866!GO:0046489;phosphoinositide biosynthetic process;0.0169891356618464!GO:0015980;energy derivation by oxidation of organic compounds;0.0171267799967592!GO:0000287;magnesium ion binding;0.0173718421708569!GO:0030118;clathrin coat;0.0175866376006044!GO:0003678;DNA helicase activity;0.0177380196610768!GO:0051540;metal cluster binding;0.0178899053472636!GO:0051536;iron-sulfur cluster binding;0.0178899053472636!GO:0051087;chaperone binding;0.0178958017855292!GO:0000118;histone deacetylase complex;0.0181179241524416!GO:0043087;regulation of GTPase activity;0.0183087051545208!GO:0030521;androgen receptor signaling pathway;0.0183087051545208!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0184625097634629!GO:0045892;negative regulation of transcription, DNA-dependent;0.0184981054313473!GO:0046966;thyroid hormone receptor binding;0.0193047269344082!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0193434324175539!GO:0005741;mitochondrial outer membrane;0.0193624002148093!GO:0019783;small conjugating protein-specific protease activity;0.019484887267429!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0206374525941826!GO:0010257;NADH dehydrogenase complex assembly;0.0206374525941826!GO:0033108;mitochondrial respiratory chain complex assembly;0.0206374525941826!GO:0006919;caspase activation;0.0206967240418041!GO:0005765;lysosomal membrane;0.0216253510125317!GO:0007041;lysosomal transport;0.0216319231527745!GO:0000049;tRNA binding;0.0216319231527745!GO:0051052;regulation of DNA metabolic process;0.0217263709347692!GO:0030880;RNA polymerase complex;0.0217263709347692!GO:0000279;M phase;0.021734399586065!GO:0008139;nuclear localization sequence binding;0.021822606677371!GO:0004843;ubiquitin-specific protease activity;0.0220009023057049!GO:0032395;MHC class II receptor activity;0.0220992830165589!GO:0018193;peptidyl-amino acid modification;0.0225040652820612!GO:0005869;dynactin complex;0.0231825611291634!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0231995794438266!GO:0015631;tubulin binding;0.0233865404050281!GO:0008017;microtubule binding;0.0234460138294472!GO:0000738;DNA catabolic process, exonucleolytic;0.0238912776165949!GO:0016491;oxidoreductase activity;0.0246690630001976!GO:0004576;oligosaccharyl transferase activity;0.0246690630001976!GO:0000209;protein polyubiquitination;0.0249148130373961!GO:0043022;ribosome binding;0.0249647060753381!GO:0032200;telomere organization and biogenesis;0.0249957153082482!GO:0000723;telomere maintenance;0.0249957153082482!GO:0016853;isomerase activity;0.02503920836188!GO:0032259;methylation;0.0252202942388855!GO:0046467;membrane lipid biosynthetic process;0.0253711195983614!GO:0009116;nucleoside metabolic process;0.0254025911603184!GO:0006607;NLS-bearing substrate import into nucleus;0.0254371242104727!GO:0000175;3'-5'-exoribonuclease activity;0.0255451140411852!GO:0005832;chaperonin-containing T-complex;0.0257977948874158!GO:0030695;GTPase regulator activity;0.0259388372040703!GO:0005083;small GTPase regulator activity;0.0267182319231333!GO:0042824;MHC class I peptide loading complex;0.0268940916966106!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.026941802751689!GO:0008097;5S rRNA binding;0.0270836955400042!GO:0008180;signalosome;0.0276127898423285!GO:0031124;mRNA 3'-end processing;0.028465492054059!GO:0007040;lysosome organization and biogenesis;0.0284706737320328!GO:0045730;respiratory burst;0.028678810415303!GO:0019883;antigen processing and presentation of endogenous antigen;0.028678810415303!GO:0019882;antigen processing and presentation;0.028678810415303!GO:0000059;protein import into nucleus, docking;0.0287950887541666!GO:0008287;protein serine/threonine phosphatase complex;0.029111247843059!GO:0043414;biopolymer methylation;0.0292590760327979!GO:0030125;clathrin vesicle coat;0.029588030296502!GO:0030665;clathrin coated vesicle membrane;0.029588030296502!GO:0031968;organelle outer membrane;0.0302424223695604!GO:0005521;lamin binding;0.0306892239256331!GO:0005689;U12-dependent spliceosome;0.0309523839622842!GO:0019814;immunoglobulin complex;0.0310016432452836!GO:0019815;B cell receptor complex;0.0310016432452836!GO:0043550;regulation of lipid kinase activity;0.0315380437265804!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0322079062105228!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.032325629232569!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0330133914926024!GO:0008538;proteasome activator activity;0.0336675354082037!GO:0016566;specific transcriptional repressor activity;0.0340366522057514!GO:0031988;membrane-bound vesicle;0.0341502616770807!GO:0046979;TAP2 binding;0.0343005235000543!GO:0046977;TAP binding;0.0343005235000543!GO:0046978;TAP1 binding;0.0343005235000543!GO:0030258;lipid modification;0.034325101156762!GO:0005669;transcription factor TFIID complex;0.034379621275485!GO:0004402;histone acetyltransferase activity;0.0347123384962319!GO:0004468;lysine N-acetyltransferase activity;0.0347123384962319!GO:0004221;ubiquitin thiolesterase activity;0.0347123384962319!GO:0007050;cell cycle arrest;0.0347757647257512!GO:0051059;NF-kappaB binding;0.0348568398465532!GO:0006338;chromatin remodeling;0.0349531064289544!GO:0000726;non-recombinational repair;0.0349531064289544!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0355188520801705!GO:0000123;histone acetyltransferase complex;0.0356031171744657!GO:0030119;AP-type membrane coat adaptor complex;0.0357243412467998!GO:0031647;regulation of protein stability;0.0360915462115719!GO:0031461;cullin-RING ubiquitin ligase complex;0.0364241378449457!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.03775114157705!GO:0006516;glycoprotein catabolic process;0.0378235657351014!GO:0008250;oligosaccharyl transferase complex;0.0379156142159447!GO:0005784;translocon complex;0.0379156142159447!GO:0016791;phosphoric monoester hydrolase activity;0.0383820425951905!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0391973778085058!GO:0000428;DNA-directed RNA polymerase complex;0.0391973778085058!GO:0046822;regulation of nucleocytoplasmic transport;0.0392021977931709!GO:0048002;antigen processing and presentation of peptide antigen;0.0396375763897167!GO:0005092;GDP-dissociation inhibitor activity;0.0406504673682649!GO:0031982;vesicle;0.0407881117318252!GO:0051098;regulation of binding;0.0408461655308858!GO:0031123;RNA 3'-end processing;0.041565361581478!GO:0032039;integrator complex;0.0417520042113271!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0418614018317007!GO:0045039;protein import into mitochondrial inner membrane;0.0418614018317007!GO:0017134;fibroblast growth factor binding;0.0419154506474167!GO:0009161;ribonucleoside monophosphate metabolic process;0.0419154506474167!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0419154506474167!GO:0030041;actin filament polymerization;0.043313929499255!GO:0048487;beta-tubulin binding;0.0434386281532346!GO:0030867;rough endoplasmic reticulum membrane;0.0436550268145299!GO:0048518;positive regulation of biological process;0.043773351876941!GO:0004520;endodeoxyribonuclease activity;0.0440931499813151!GO:0007033;vacuole organization and biogenesis;0.0440975503545874!GO:0007004;telomere maintenance via telomerase;0.0444779690812121!GO:0030097;hemopoiesis;0.0444994907773115!GO:0045321;leukocyte activation;0.0445197677260223!GO:0030131;clathrin adaptor complex;0.0446935146053343!GO:0003682;chromatin binding;0.0446935146053343!GO:0019867;outer membrane;0.0450180553463708!GO:0043280;positive regulation of caspase activity;0.0453096071583908!GO:0046426;negative regulation of JAK-STAT cascade;0.0453096071583908!GO:0000097;sulfur amino acid biosynthetic process;0.0459718034600753!GO:0000096;sulfur amino acid metabolic process;0.0462579746188616!GO:0022406;membrane docking;0.0470616653925385!GO:0048278;vesicle docking;0.0470616653925385!GO:0006308;DNA catabolic process;0.0471711282090753!GO:0006914;autophagy;0.0472625772838496!GO:0022411;cellular component disassembly;0.0480127248730129!GO:0005788;endoplasmic reticulum lumen;0.0480754302503135!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0480754302503135!GO:0005758;mitochondrial intermembrane space;0.0487404610262984!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0491907119251296!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0493181635051439!GO:0005850;eukaryotic translation initiation factor 2 complex;0.049473176661291
|sample_id=12189
|sample_id=12189
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=POU2F1..3:3.60678794268;POU5F1:3.3218637589;FOXA2:2.16038668294;PDX1:1.91716215155;FOX{F1,F2,J1}:1.89564701563;PBX1:1.77733695999;ELF1,2,4:1.52458156901;DMAP1_NCOR{1,2}_SMARC:1.51101526278;TLX2:1.43834472474;PAX6:1.40873229161;FOX{I1,J2}:1.35894961448;IRF1,2:1.34117024798;FOXO1,3,4:1.32876459412;RFX2..5_RFXANK_RFXAP:1.30243066963;CRX:1.30051921592;SPI1:1.27608470035;HES1:1.12326632125;ETS1,2:1.10682008351;MYOD1:1.05313354701;RUNX1..3:1.02229293402;NFKB1_REL_RELA:1.01845055747;NKX2-2,8:1.01657524969;SPIB:0.98216716093;FOX{D1,D2}:0.967599836904;YY1:0.929608581739;ELK1,4_GABP{A,B1}:0.906765213243;LMO2:0.878126803183;HBP1_HMGB_SSRP1_UBTF:0.874844862123;OCT4_SOX2{dimer}:0.865855957442;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.860209950863;STAT1,3:0.814522538744;ZEB1:0.780220807759;ESR1:0.759373742577;IRF7:0.737470189379;ALX1:0.733766608215;GATA6:0.714420792137;BPTF:0.71149783428;NANOG{mouse}:0.702140647838;CDX1,2,4:0.698640804661;LEF1_TCF7_TCF7L1,2:0.697314389328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.689985114784;NFIX:0.588152232688;VSX1,2:0.563378159834;AIRE:0.53190049906;NFIL3:0.505211725978;RORA:0.479350396776;CREB1:0.472946811081;SNAI1..3:0.463441638095;NKX6-1,2:0.406480205706;TGIF1:0.369676246206;MEF2{A,B,C,D}:0.334449516133;NR5A1,2:0.322281149884;GLI1..3:0.311972592641;HAND1,2:0.30071190871;ADNP_IRX_SIX_ZHX:0.254530336879;ATF5_CREB3:0.242179266855;CUX2:0.239095421957;SOX5:0.237491199977;RXRA_VDR{dimer}:0.228747868771;BREu{core}:0.219325236595;HMX1:0.205620573914;MYB:0.204462155922;STAT5{A,B}:0.17520961866;FOXP3:0.169807248533;PRRX1,2:0.145947534853;FOXN1:0.13887693584;ZNF148:0.118708993237;ATF4:0.112838897747;GFI1:0.0789110352884;ATF2:0.0602909475077;AR:0.0497790711932;EP300:0.0414085556162;ONECUT1,2:0.0341380659812;NHLH1,2:0.0276549756856;SOX{8,9,10}:0.00591545320107;PAX2:0.00492307547246;PAX3,7:-0.000215128560451;FOXQ1:-0.0112187443465;CDC5L:-0.0161292374807;NANOG:-0.0555367141508;ATF6:-0.0828756844404;FOXP1:-0.119999097201;EVI1:-0.123548057124;HOX{A6,A7,B6,B7}:-0.150077438582;ALX4:-0.182987278429;SMAD1..7,9:-0.18538788288;SREBF1,2:-0.18764881063;HNF4A_NR2F1,2:-0.191350452287;TFAP4:-0.212259979704;NR6A1:-0.226066482671;ZNF143:-0.229380695454;NFATC1..3:-0.230467089409;T:-0.232375365088;TAL1_TCF{3,4,12}:-0.232475707189;AHR_ARNT_ARNT2:-0.23611529685;bHLH_family:-0.240910699504;NFY{A,B,C}:-0.291485587662;HOX{A4,D4}:-0.291576769182;E2F1..5:-0.292180650886;ZFP161:-0.300679211818;ZBTB16:-0.310104216861;PRDM1:-0.317230289433;HNF1A:-0.332079500781;CEBPA,B_DDIT3:-0.338266958342;POU1F1:-0.339612910385;TBX4,5:-0.363269330797;TFCP2:-0.382479993809;SPZ1:-0.4371961118;FOSL2:-0.437442528425;NRF1:-0.450340398172;ARID5B:-0.461588128335;ZNF238:-0.465873992024;EBF1:-0.484891385123;FOXL1:-0.518628998171;NKX2-1,4:-0.522514390441;FOS_FOS{B,L1}_JUN{B,D}:-0.533048500065;NKX2-3_NKX2-5:-0.537166290954;IKZF2:-0.542939518003;PAX4:-0.543272495746;RFX1:-0.546874902761;MYFfamily:-0.548400544237;HSF1,2:-0.59963430533;TOPORS:-0.604734791602;SOX17:-0.636612107152;BACH2:-0.639838734316;TP53:-0.646586936055;SRF:-0.668740980401;PAX8:-0.673932843945;REST:-0.685979918754;HIF1A:-0.692446373044;TEF:-0.716539522221;JUN:-0.720175971797;NKX3-2:-0.722567328466;XBP1:-0.728087007923;MYBL2:-0.738462591713;RXR{A,B,G}:-0.813100527352;NR1H4:-0.815920154601;ZNF384:-0.83585831506;MTF1:-0.844101214564;HOX{A5,B5}:-0.872095916672;NFE2:-0.874406622379;SOX2:-0.88617732225;HLF:-0.894652414959;DBP:-0.898151114473;RBPJ:-0.898780513254;MAFB:-0.903612714137;HOXA9_MEIS1:-0.928224436863;GCM1,2:-0.951247072539;POU6F1:-0.958015199739;EGR1..3:-0.977296848789;NFE2L2:-1.00247207148;STAT2,4,6:-1.07055996218;TBP:-1.11671671161;FOXM1:-1.12315875277;PATZ1:-1.14852132386;NR3C1:-1.1493230042;POU3F1..4:-1.16457650787;GATA4:-1.18875112817;MZF1:-1.19879539352;GZF1:-1.20538618915;MED-1{core}:-1.20812052858;EN1,2:-1.21364673394;PPARG:-1.23352783277;GFI1B:-1.26398118905;MAZ:-1.27757768662;UFEwm:-1.33150488521;MTE{core}:-1.33502244186;ZNF423:-1.34757588951;RREB1:-1.35456039694;ESRRA:-1.36696782749;NKX3-1:-1.38719509305;TEAD1:-1.41114736883;HMGA1,2:-1.44665665934;LHX3,4:-1.44817502763;HIC1:-1.46517601182;PITX1..3:-1.5028364847;GTF2I:-1.52460455167;KLF4:-1.53628570673;ZIC1..3:-1.59181678187;XCPE1{core}:-1.63955576791;ZBTB6:-1.6994959762;TFAP2B:-1.71186789502;TLX1..3_NFIC{dimer}:-1.7325262558;TFAP2{A,C}:-1.73298274685;TFDP1:-1.81029707668;SP1:-1.83836569562;FOXD3:-1.86294493895;PAX5:-1.86370101696;GTF2A1,2:-2.12722736404;NFE2L1:-2.20344996766;IKZF1:-2.33717859597;PAX1,9:-2.77328462782
|top_motifs=POU2F1..3:3.60678794268;POU5F1:3.3218637589;FOXA2:2.16038668294;PDX1:1.91716215155;FOX{F1,F2,J1}:1.89564701563;PBX1:1.77733695999;ELF1,2,4:1.52458156901;DMAP1_NCOR{1,2}_SMARC:1.51101526278;TLX2:1.43834472474;PAX6:1.40873229161;FOX{I1,J2}:1.35894961448;IRF1,2:1.34117024798;FOXO1,3,4:1.32876459412;RFX2..5_RFXANK_RFXAP:1.30243066963;CRX:1.30051921592;SPI1:1.27608470035;HES1:1.12326632125;ETS1,2:1.10682008351;MYOD1:1.05313354701;RUNX1..3:1.02229293402;NFKB1_REL_RELA:1.01845055747;NKX2-2,8:1.01657524969;SPIB:0.98216716093;FOX{D1,D2}:0.967599836904;YY1:0.929608581739;ELK1,4_GABP{A,B1}:0.906765213243;LMO2:0.878126803183;HBP1_HMGB_SSRP1_UBTF:0.874844862123;OCT4_SOX2{dimer}:0.865855957442;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.860209950863;STAT1,3:0.814522538744;ZEB1:0.780220807759;ESR1:0.759373742577;IRF7:0.737470189379;ALX1:0.733766608215;GATA6:0.714420792137;BPTF:0.71149783428;NANOG{mouse}:0.702140647838;CDX1,2,4:0.698640804661;LEF1_TCF7_TCF7L1,2:0.697314389328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.689985114784;NFIX:0.588152232688;VSX1,2:0.563378159834;AIRE:0.53190049906;NFIL3:0.505211725978;RORA:0.479350396776;CREB1:0.472946811081;SNAI1..3:0.463441638095;NKX6-1,2:0.406480205706;TGIF1:0.369676246206;MEF2{A,B,C,D}:0.334449516133;NR5A1,2:0.322281149884;GLI1..3:0.311972592641;HAND1,2:0.30071190871;ADNP_IRX_SIX_ZHX:0.254530336879;ATF5_CREB3:0.242179266855;CUX2:0.239095421957;SOX5:0.237491199977;RXRA_VDR{dimer}:0.228747868771;BREu{core}:0.219325236595;HMX1:0.205620573914;MYB:0.204462155922;STAT5{A,B}:0.17520961866;FOXP3:0.169807248533;PRRX1,2:0.145947534853;FOXN1:0.13887693584;ZNF148:0.118708993237;ATF4:0.112838897747;GFI1:0.0789110352884;ATF2:0.0602909475077;AR:0.0497790711932;EP300:0.0414085556162;ONECUT1,2:0.0341380659812;NHLH1,2:0.0276549756856;SOX{8,9,10}:0.00591545320107;PAX2:0.00492307547246;PAX3,7:-0.000215128560451;FOXQ1:-0.0112187443465;CDC5L:-0.0161292374807;NANOG:-0.0555367141508;ATF6:-0.0828756844404;FOXP1:-0.119999097201;EVI1:-0.123548057124;HOX{A6,A7,B6,B7}:-0.150077438582;ALX4:-0.182987278429;SMAD1..7,9:-0.18538788288;SREBF1,2:-0.18764881063;HNF4A_NR2F1,2:-0.191350452287;TFAP4:-0.212259979704;NR6A1:-0.226066482671;ZNF143:-0.229380695454;NFATC1..3:-0.230467089409;T:-0.232375365088;TAL1_TCF{3,4,12}:-0.232475707189;AHR_ARNT_ARNT2:-0.23611529685;bHLH_family:-0.240910699504;NFY{A,B,C}:-0.291485587662;HOX{A4,D4}:-0.291576769182;E2F1..5:-0.292180650886;ZFP161:-0.300679211818;ZBTB16:-0.310104216861;PRDM1:-0.317230289433;HNF1A:-0.332079500781;CEBPA,B_DDIT3:-0.338266958342;POU1F1:-0.339612910385;TBX4,5:-0.363269330797;TFCP2:-0.382479993809;SPZ1:-0.4371961118;FOSL2:-0.437442528425;NRF1:-0.450340398172;ARID5B:-0.461588128335;ZNF238:-0.465873992024;EBF1:-0.484891385123;FOXL1:-0.518628998171;NKX2-1,4:-0.522514390441;FOS_FOS{B,L1}_JUN{B,D}:-0.533048500065;NKX2-3_NKX2-5:-0.537166290954;IKZF2:-0.542939518003;PAX4:-0.543272495746;RFX1:-0.546874902761;MYFfamily:-0.548400544237;HSF1,2:-0.59963430533;TOPORS:-0.604734791602;SOX17:-0.636612107152;BACH2:-0.639838734316;TP53:-0.646586936055;SRF:-0.668740980401;PAX8:-0.673932843945;REST:-0.685979918754;HIF1A:-0.692446373044;TEF:-0.716539522221;JUN:-0.720175971797;NKX3-2:-0.722567328466;XBP1:-0.728087007923;MYBL2:-0.738462591713;RXR{A,B,G}:-0.813100527352;NR1H4:-0.815920154601;ZNF384:-0.83585831506;MTF1:-0.844101214564;HOX{A5,B5}:-0.872095916672;NFE2:-0.874406622379;SOX2:-0.88617732225;HLF:-0.894652414959;DBP:-0.898151114473;RBPJ:-0.898780513254;MAFB:-0.903612714137;HOXA9_MEIS1:-0.928224436863;GCM1,2:-0.951247072539;POU6F1:-0.958015199739;EGR1..3:-0.977296848789;NFE2L2:-1.00247207148;STAT2,4,6:-1.07055996218;TBP:-1.11671671161;FOXM1:-1.12315875277;PATZ1:-1.14852132386;NR3C1:-1.1493230042;POU3F1..4:-1.16457650787;GATA4:-1.18875112817;MZF1:-1.19879539352;GZF1:-1.20538618915;MED-1{core}:-1.20812052858;EN1,2:-1.21364673394;PPARG:-1.23352783277;GFI1B:-1.26398118905;MAZ:-1.27757768662;UFEwm:-1.33150488521;MTE{core}:-1.33502244186;ZNF423:-1.34757588951;RREB1:-1.35456039694;ESRRA:-1.36696782749;NKX3-1:-1.38719509305;TEAD1:-1.41114736883;HMGA1,2:-1.44665665934;LHX3,4:-1.44817502763;HIC1:-1.46517601182;PITX1..3:-1.5028364847;GTF2I:-1.52460455167;KLF4:-1.53628570673;ZIC1..3:-1.59181678187;XCPE1{core}:-1.63955576791;ZBTB6:-1.6994959762;TFAP2B:-1.71186789502;TLX1..3_NFIC{dimer}:-1.7325262558;TFAP2{A,C}:-1.73298274685;TFDP1:-1.81029707668;SP1:-1.83836569562;FOXD3:-1.86294493895;PAX5:-1.86370101696;GTF2A1,2:-2.12722736404;NFE2L1:-2.20344996766;IKZF1:-2.33717859597;PAX1,9:-2.77328462782
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12189-129B2;search_select_hide=table117:FF:12189-129B2
}}
}}

Latest revision as of 18:33, 4 June 2020

Name:CD19+ B Cells (pluriselect), donor090309, donation1
Species:Human (Homo sapiens)
Library ID:CNhs12177,RDhi10007
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeb cell
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013679
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12177 CAGE DRX008050 DRR008922
RDhi10007 RNA-Seq DRX012341 DRR013789
Accession ID Hg19

Library idBAMCTSS
CNhs12177 DRZ000347 DRZ001732
RDhi10007 DRZ002990
Accession ID Hg38

Library idBAMCTSS
CNhs12177 DRZ011697 DRZ013082
RDhi10007
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.126
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.245
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.345
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.293
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.441
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.532
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.655
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.298
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary1.451
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.432
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.343
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.655
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.442
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil1.063
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.457
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.235
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix1.063
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.788
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12177

Jaspar motifP-value
MA0002.24.30773e-7
MA0003.10.431
MA0004.10.403
MA0006.10.626
MA0007.10.801
MA0009.10.945
MA0014.10.828
MA0017.10.0194
MA0018.20.937
MA0019.10.822
MA0024.10.479
MA0025.10.343
MA0027.10.578
MA0028.10.0091
MA0029.10.854
MA0030.10.0625
MA0031.10.233
MA0035.20.148
MA0038.10.348
MA0039.20.864
MA0040.10.708
MA0041.10.134
MA0042.10.769
MA0043.10.856
MA0046.10.767
MA0047.20.145
MA0048.10.297
MA0050.15.0443e-9
MA0051.12.00821e-4
MA0052.10.335
MA0055.10.815
MA0057.10.922
MA0058.10.35
MA0059.10.195
MA0060.10.255
MA0061.14.29804e-4
MA0062.23.7232e-8
MA0065.20.0131
MA0066.10.118
MA0067.10.708
MA0068.10.367
MA0069.10.344
MA0070.10.512
MA0071.10.528
MA0072.10.418
MA0073.10.744
MA0074.10.653
MA0076.10.00119
MA0077.10.564
MA0078.10.774
MA0079.20.356
MA0080.22.70075e-11
MA0081.10.00161
MA0083.10.139
MA0084.10.294
MA0087.10.359
MA0088.10.135
MA0090.17.88899e-4
MA0091.10.216
MA0092.10.768
MA0093.10.513
MA0099.20.0857
MA0100.10.442
MA0101.10.0564
MA0102.20.923
MA0103.10.0143
MA0104.20.127
MA0105.11.61476e-7
MA0106.10.995
MA0107.10.0243
MA0108.21.06069e-6
MA0111.10.452
MA0112.20.00105
MA0113.10.288
MA0114.10.0535
MA0115.10.217
MA0116.18.5076e-6
MA0117.10.845
MA0119.10.957
MA0122.10.432
MA0124.10.884
MA0125.10.669
MA0131.10.355
MA0135.10.0158
MA0136.11.07114e-14
MA0137.20.742
MA0138.20.267
MA0139.10.209
MA0140.10.0156
MA0141.10.501
MA0142.10.0358
MA0143.10.5
MA0144.10.952
MA0145.10.784
MA0146.10.37
MA0147.10.123
MA0148.10.281
MA0149.10.0591
MA0150.10.962
MA0152.10.331
MA0153.10.0393
MA0154.12.39889e-4
MA0155.10.886
MA0156.17.79553e-10
MA0157.10.121
MA0159.10.0356
MA0160.10.3
MA0162.10.568
MA0163.17.6575e-11
MA0164.10.979
MA0258.10.0108
MA0259.10.542



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12177

Novel motifP-value
10.106
100.054
1000.602
1010.311
1020.99
1030.0546
1040.215
1050.213
1060.194
1070.947
1080.362
1090.058
110.0492
1100.14
1110.113
1120.221
1130.0471
1140.155
1150.702
1160.958
1170.0083
1180.26
1190.469
120.792
1200.388
1210.962
1220.616
1230.148
1240.03
1250.127
1260.124
1270.479
1280.703
1290.643
130.528
1300.459
1310.511
1320.579
1330.0108
1340.731
1350.796
1360.897
1370.182
1380.475
1390.045
140.434
1400.177
1410.0454
1420.485
1430.00538
1440.849
1450.269
1460.107
1470.203
1480.226
1490.172
150.0737
1500.51
1510.622
1520.983
1530.722
1540.987
1550.0273
1560.573
1570.266
1580.168
1590.102
160.619
1600.296
1610.0999
1620.964
1630.528
1640.646
1650.482
1660.703
1670.0573
1680.0533
1690.23
170.507
180.291
190.993
20.806
200.87
210.742
220.583
230.808
240.297
250.0491
260.132
270.145
280.53
290.141
30.0526
300.624
310.515
320.973
330.472
340.746
350.135
360.00986
370.11
380.359
390.756
40.469
400.115
410.121
420.175
430.0993
440.334
450.742
460.128
470.0695
480.123
490.0776
50.272
500.911
510.349
520.863
530.459
540.572
550.055
560.578
570.217
580.0207
590.208
60.943
600.266
610.0577
620.012
630.497
640.175
650.463
660.548
670.431
680.217
690.843
70.166
700.0315
710.0403
720.0966
730.532
740.126
750.0226
760.26
770.788
780.168
790.296
80.326
800.00748
810.186
820.0823
830.564
840.512
850.402
860.117
870.322
880.954
890.409
90.399
900.0128
910.463
920.509
930.781
940.0409
950.016
960.33
970.505
980.183
990.27



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12177


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000236 (B cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000025 (CD19-positive B cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FF:12189-129B2&oldid=4576940"