FFCP PHASE1:Mm9::chrX:84483714..84483755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=485 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:84483714..84483755,- | |||
|description=CAGE_peak_at_chrX:84483714..84483755,- | |description=CAGE_peak_at_chrX:84483714..84483755,- | ||
|id=chrX:84483714..84483755,- | |id=chrX:84483714..84483755,- | ||
|ontology_enrichment_celltype=CL:0002319!2.69e-16!43;CL:0000055!6.85e-16!50;CL:0000221!2.24e-15!44;CL:0000133!2.24e-15!44;CL:0002321!5.21e-14!70;CL:0000220!5.21e-14!70;CL:0000548!1.19e-12!115;CL:0000004!1.19e-12!115;CL:0000255!1.19e-12!115;CL:0000540!2.21e-12!33;CL:0000047!2.21e-12!33;CL:0000031!2.21e-12!33;CL:0000404!2.21e-12!33;CL:0000393!5.86e-12!39;CL:0000211!5.86e-12!39;CL:0002371!4.80e-11!118;CL:0000117!7.38e-11!23;CL:0000337!7.38e-11!23;CL:0000144!1.10e-09!121;CL:0000012!1.10e-09!121;CL:0000723!3.49e-09!91;CL:0000048!3.49e-09!91;CL:0000034!4.52e-08!97 | |ontology_enrichment_celltype=CL:0002319!2.69e-16!43;CL:0000055!6.85e-16!50;CL:0000221!2.24e-15!44;CL:0000133!2.24e-15!44;CL:0002321!5.21e-14!70;CL:0000220!5.21e-14!70;CL:0000548!1.19e-12!115;CL:0000004!1.19e-12!115;CL:0000255!1.19e-12!115;CL:0000540!2.21e-12!33;CL:0000047!2.21e-12!33;CL:0000031!2.21e-12!33;CL:0000404!2.21e-12!33;CL:0000393!5.86e-12!39;CL:0000211!5.86e-12!39;CL:0002371!4.80e-11!118;CL:0000117!7.38e-11!23;CL:0000337!7.38e-11!23;CL:0000144!1.10e-09!121;CL:0000012!1.10e-09!121;CL:0000723!3.49e-09!91;CL:0000048!3.49e-09!91;CL:0000034!4.52e-08!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.39e-22,43;CL:0000221,1.02e-21,44;CL:0000133,1.02e-21,44;CL:0002321,2.59e-20,70;CL:0000540,4.61e-17,33;CL:0000047,4.61e-17,33;CL:0000031,4.61e-17,33;CL:0000404,4.61e-17,33;CL:0000393,3.98e-16,39;CL:0000211,3.98e-16,39;CL:0000723,3.51e-15,91;CL:0000048,3.51e-15,91;CL:0000117,4.25e-14,23;CL:0000337,4.25e-14,23;CL:0000034,1.28e-13,97;CL:0002453,1.04e-08,8;CL:0000128,5.94e-07,6;CL:0000126,5.94e-07,6;CL:0000127,5.94e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.61e-09!73;UBERON:0005743!2.61e-09!73;UBERON:0000073!7.99e-09!75;UBERON:0001016!7.99e-09!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.69e-14,73;UBERON:0001016,3.02e-13,75;UBERON:0004121,3.68e-08,95;UBERON:0000924,3.68e-08,95;UBERON:0006601,3.68e-08,95;UBERON:0000073,1.41e-07,54;UBERON:0002020,6.14e-07,34;UBERON:0001049,8.56e-07,52;UBERON:0005068,8.56e-07,52;UBERON:0006241,8.56e-07,52;UBERON:0007135,8.56e-07,52 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,5.50985302940982,0.503637815735669,0.934450562382103,1.54947988129892,0.703943610758334,0.468129052643987,0.171217968225505,0.398860794976682,0,0.786783621770977,1.99865857089398,0.809901069559304,2.09868563438444,0.473193248037357,0.274228867211478,1.69755860719212,0.850432901510698,1.48936426801328,0,0.159992422793407,2.2940928106717,0,1.29228598847722,0.430942465371778,1.14014051673824,0,0.221730510655305,28.5763803056834,13.5314253268605,0,0.577703239502549,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.811015449756117,0.367093504323363,20.342174953049,8.72100625521786,11.4236815021925,6.80504646759992,7.41928034614421,15.8127820801469,0.503347818173209,5.07753499407941,1.00828139742739,1.54355661621568,1.43266719969378,4.64104883049698,4.04632921719196,2.11596391708813,4.43681982454325,14.2314703469035,7.11435836888911,5.39939830368839,5.93319817540185,9.9467216092454,6.5912024314049,13.831858991576,4.04389488003063,5.40023753326763,2.52389953621658,4.85606673486466,2.42955395046775,2.44981598429908,2.01275489138296,4.5960939330501,5.50579404996943,1.40456071893706,0.768032666281217,3.03338461779446,1.00636407962651,5.73004707612436,5.58365998002762,10.6924895906019,3.66715794664344,2.65165726926301,2.27794689278565,6.15118171223492,0.454357159999104,0.226714680320357,0.289864488701678,0.860423876981386,17.6792546764015,15.1116893658589,16.8941868536394,3.58421509677868,0.561777680527007,0.340860645156116,4.41636207824877,3.18005617059306,0.14084341977668,1.28326477414318,0,0,2.81438353314578,3.04031838570118,3.53867111510348,1.02765491747154,0,0.445326417194474,1.73485326766136,1.52232739156071,2.07553947530453,1.50722640552623,0.587943535678524,0.879666139307728,0.741584903203122,0.144599356919912,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0.585561594023094,0.83778682725382,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,1.02286182932132,0,0.324482526135515,0.81471491080253,0.622034853050465,0,0,0.650602214813519,1.14951052216736,0.180062129805349,0.90422890701429,0.272145996605311,0.2562274405697,0.655912071918102,0,0.215567992932842,0,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,1.79130840136644,0,0,0.852490498186778,0,0.469052119962192,1.08037236876609,0,0.393528463494808,1.23413690309903,0.232533944750408,0.804820204198858,0.467061369468678,0.822799249567402,0.985004784474571,0.243206428637567,0.292399974850665,0.439100230582101,1.20785776884335,0.420579897128254,0.102904612379284,1.98251269790279,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0,3.79623249235609,0.988193728344065,1.50801125280162,0.596869416123452,0.19496408711912,2.69645822596266,1.08069024937347,1.39398891278057,0.189667900953082,0.685491075658373,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0.295220295959204,0.156998727841375,0.493588655687202,0.592905254174298,0.166845105716094,0.589676985339609,0.449724224769707,0.608580364165509,1.20588579876208,2.29163266603278,0,0.972811360650212,0.549122826376163,27.3159592401974,0.372140947668503,2.18426371180192,0.252578877947112,0.538192240565737,1.4473305640901,0.184753190166605,1.70542270593436,0,0.848725428875941,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,1.38147985492716,0.578596234326046,0,0.54390568381871,0.983528546038072,1.10374698521893,0,0.586058432961016,2.13115428989678,1.00988370881749,1.57754109708128,3.90438744296638,1.29254038639679,1.43381278771531,1.55959071857676,2.83076530788832,2.02405350837447,1.16902343164525,2.37172666767914,0,0.283880170416537,1.78065603667255,0.325773918707152,0.164970122972535,1.32745138339963,1.21390318077491,0.604647113929502,0.188605079755898,1.18120757152309,1.53717573971964,1.80899805217755,0,2.13898427030833,0.948110273807448,6.32511651449993,3.09406629744561,0.340439605753788,1.8006109403131,1.16422815404479,2.14337035031592,0,1.78368817602071,1.64549020602121,3.04464949114599,0.23467170806371,0.42366414172764,0.661585194164886,0.16488625294148,0.161464426695906,0.241251699712623,0.477489376012546,0,1.1659233465194,0.18542530201051,0.683483523191411,0.82554747185289,0.555583582109135,0.565105371014073,0.136694227721025,0.686334519619568,0,0.139951452323658,0,0,0.316335993581135,0,1.08005340821801,0.418176592028937,0.87345025498471,0.404593039154462,0.578574190077352,1.83229159388821,0.90730481304255,0.621339313086926,1.69107881605257,0.299033092087958,0.330916980914195,0.194451188344048,1.03327858782185,0.337912250981556,0.469428954583016,0.5208175393758,0.314578033277133,0.724752362478018,0.576060012515731,0,0.810900861160657,0.821687657318618,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.0762068066549998,0.604957110821043,0.194915761479505,0.19242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| |phase1_expression=0,0,0.454999239389536,0.60492842261366,5.50985302940982,0.503637815735669,0.934450562382103,1.54947988129892,0.703943610758334,0.468129052643987,0.171217968225505,0.398860794976682,0,0.786783621770977,1.99865857089398,0.809901069559304,2.09868563438444,0.473193248037357,0.274228867211478,1.69755860719212,0.850432901510698,1.48936426801328,0,0.159992422793407,2.2940928106717,0,1.29228598847722,0.430942465371778,1.14014051673824,0,0.221730510655305,28.5763803056834,13.5314253268605,0,0.577703239502549,0,0,0,0,0,0.588231488031014,0,0.485510353031154,0.125896817975577,0.811015449756117,0.367093504323363,20.342174953049,8.72100625521786,11.4236815021925,6.80504646759992,7.41928034614421,15.8127820801469,0.503347818173209,5.07753499407941,1.00828139742739,1.54355661621568,1.43266719969378,4.64104883049698,4.04632921719196,2.11596391708813,4.43681982454325,14.2314703469035,7.11435836888911,5.39939830368839,5.93319817540185,9.9467216092454,6.5912024314049,13.831858991576,4.04389488003063,5.40023753326763,2.52389953621658,4.85606673486466,2.42955395046775,2.44981598429908,2.01275489138296,4.5960939330501,5.50579404996943,1.40456071893706,0.768032666281217,3.03338461779446,1.00636407962651,5.73004707612436,5.58365998002762,10.6924895906019,3.66715794664344,2.65165726926301,2.27794689278565,6.15118171223492,0.454357159999104,0.226714680320357,0.289864488701678,0.860423876981386,17.6792546764015,15.1116893658589,16.8941868536394,3.58421509677868,0.561777680527007,0.340860645156116,4.41636207824877,3.18005617059306,0.14084341977668,1.28326477414318,0,0,2.81438353314578,3.04031838570118,3.53867111510348,1.02765491747154,0,0.445326417194474,1.73485326766136,1.52232739156071,2.07553947530453,1.50722640552623,0.587943535678524,0.879666139307728,0.741584903203122,0.144599356919912,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0.585561594023094,0.83778682725382,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,1.02286182932132,0,0.324482526135515,0.81471491080253,0.622034853050465,0,0,0.650602214813519,1.14951052216736,0.180062129805349,0.90422890701429,0.272145996605311,0.2562274405697,0.655912071918102,0,0.215567992932842,0,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,1.79130840136644,0,0,0.852490498186778,0,0.469052119962192,1.08037236876609,0,0.393528463494808,1.23413690309903,0.232533944750408,0.804820204198858,0.467061369468678,0.822799249567402,0.985004784474571,0.243206428637567,0.292399974850665,0.439100230582101,1.20785776884335,0.420579897128254,0.102904612379284,1.98251269790279,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0,0,3.79623249235609,0.988193728344065,1.50801125280162,0.596869416123452,0.19496408711912,2.69645822596266,1.08069024937347,1.39398891278057,0.189667900953082,0.685491075658373,0,0.203651327845314,0.193952487167626,0.210407459670956,0.189709611372772,0.295220295959204,0.156998727841375,0.493588655687202,0.592905254174298,0.166845105716094,0.589676985339609,0.449724224769707,0.608580364165509,1.20588579876208,2.29163266603278,0,0.972811360650212,0.549122826376163,27.3159592401974,0.372140947668503,2.18426371180192,0.252578877947112,0.538192240565737,1.4473305640901,0.184753190166605,1.70542270593436,0,0.848725428875941,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,1.38147985492716,0.578596234326046,0,0.54390568381871,0.983528546038072,1.10374698521893,0,0.586058432961016,2.13115428989678,1.00988370881749,1.57754109708128,3.90438744296638,1.29254038639679,1.43381278771531,1.55959071857676,2.83076530788832,2.02405350837447,1.16902343164525,2.37172666767914,0,0.283880170416537,1.78065603667255,0.325773918707152,0.164970122972535,1.32745138339963,1.21390318077491,0.604647113929502,0.188605079755898,1.18120757152309,1.53717573971964,1.80899805217755,0,2.13898427030833,0.948110273807448,6.32511651449993,3.09406629744561,0.340439605753788,1.8006109403131,1.16422815404479,2.14337035031592,0,1.78368817602071,1.64549020602121,3.04464949114599,0.23467170806371,0.42366414172764,0.661585194164886,0.16488625294148,0.161464426695906,0.241251699712623,0.477489376012546,0,1.1659233465194,0.18542530201051,0.683483523191411,0.82554747185289,0.555583582109135,0.565105371014073,0.136694227721025,0.686334519619568,0,0.139951452323658,0,0,0.316335993581135,0,1.08005340821801,0.418176592028937,0.87345025498471,0.404593039154462,0.578574190077352,1.83229159388821,0.90730481304255,0.621339313086926,1.69107881605257,0.299033092087958,0.330916980914195,0.194451188344048,1.03327858782185,0.337912250981556,0.469428954583016,0.5208175393758,0.314578033277133,0.724752362478018,0.576060012515731,0,0.810900861160657,0.821687657318618,0.389762468933385,0.179026695667481,0.198681354781265,0.600977247599844,0.147689527174577,0.201932899896295,0.0762068066549998,0.604957110821043,0.194915761479505,0.19242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| ||
|short_description=p@chrX:84483714..84483755,- | |short_description=p@chrX:84483714..84483755,- | ||
}} | }} |
Latest revision as of 10:53, 6 August 2015
Short description: | p@chrX:84483714..84483755, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:84483714..84483755, - |
Coexpression cluster: | MCL_coexpression_mm9:485 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.39e-22 | 43 |
ectodermal cell | 1.02e-21 | 44 |
neurectodermal cell | 1.02e-21 | 44 |
embryonic cell | 2.59e-20 | 70 |
neuron | 4.61e-17 | 33 |
neuronal stem cell | 4.61e-17 | 33 |
neuroblast | 4.61e-17 | 33 |
electrically signaling cell | 4.61e-17 | 33 |
electrically responsive cell | 3.98e-16 | 39 |
electrically active cell | 3.98e-16 | 39 |
somatic stem cell | 3.51e-15 | 91 |
multi fate stem cell | 3.51e-15 | 91 |
CNS neuron (sensu Vertebrata) | 4.25e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.25e-14 | 23 |
stem cell | 1.28e-13 | 97 |
oligodendrocyte precursor cell | 1.04e-08 | 8 |
oligodendrocyte | 5.94e-07 | 6 |
macroglial cell | 5.94e-07 | 6 |
astrocyte | 5.94e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.69e-14 | 73 |
nervous system | 3.02e-13 | 75 |
ectoderm-derived structure | 3.68e-08 | 95 |
ectoderm | 3.68e-08 | 95 |
presumptive ectoderm | 3.68e-08 | 95 |
regional part of nervous system | 1.41e-07 | 54 |
gray matter | 6.14e-07 | 34 |
neural tube | 8.56e-07 | 52 |
neural rod | 8.56e-07 | 52 |
future spinal cord | 8.56e-07 | 52 |
neural keel | 8.56e-07 | 52 |