FFCP PHASE1:Hg19::chr13:25755521..25755542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000457628_5end | |association_with_transcript=-36bp_to_ENST00000457628_5end | ||
|cluster_id=chr13:25755521..25755542,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_ENST00000457628_5end | |description=CAGE_peak_2_at_ENST00000457628_5end | ||
|id=chr13:25755521..25755542,+ | |id=chr13:25755521..25755542,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.49e-10!24;CL:0000826!3.49e-10!24;CL:0000080!1.25e-07!6 | |ontology_enrichment_celltype=CL:0000945!3.49e-10!24;CL:0000826!3.49e-10!24;CL:0000080!1.25e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3 | |||
|ontology_enrichment_disease=DOID:2355!1.97e-11!1;DOID:630!2.42e-11!1;DOID:0050177!2.42e-11!1;DOID:0050427!2.42e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.44e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.01e-21!2;UBERON:0002757!1.01e-21!2;UBERON:0010134!1.01e-21!2;UBERON:0002784!1.01e-21!2;UBERON:0005408!1.01e-21!2;UBERON:0001899!1.01e-21!2;UBERON:0003296!2.42e-11!4;UBERON:0010133!2.42e-11!4;UBERON:0000970!2.67e-08!20;UBERON:0002104!6.52e-08!21;UBERON:0000020!3.09e-07!23;UBERON:0001032!6.11e-07!24;UBERON:0004456!6.11e-07!24;UBERON:0001894!7.68e-07!7;UBERON:0006222!7.68e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.04e-66;2!UBERON:0002757;1.04e-66;2!UBERON:0010134;1.04e-66;2!UBERON:0005408;1.04e-66;2!UBERON:0001899;1.04e-66;2!UBERON:0003296;5.06e-34;4!UBERON:0010133;5.06e-34;4!UBERON:0002784;5.06e-34;4!UBERON:0001894;5.89e-20;7!UBERON:0002106;3.06e-12;3!UBERON:0000966;5.73e-08;5!UBERON:0005388;5.73e-08;5!UBERON:0001802;5.73e-08;5!UBERON:0004177;7.25e-08;5!UBERON:0005057;7.25e-08;5!UBERON:0000970;1.35e-07;20!UBERON:0002104;2.82e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.04e-66,2;UBERON:0002757,1.04e-66,2;UBERON:0010134,1.04e-66,2;UBERON:0005408,1.04e-66,2;UBERON:0001899,1.04e-66,2;UBERON:0003296,5.06e-34,4;UBERON:0010133,5.06e-34,4;UBERON:0002784,5.06e-34,4;UBERON:0001894,5.89e-20,7;UBERON:0006222,5.89e-20,7;UBERON:0002106,2.89e-12,3;UBERON:0004854,2.89e-12,3;UBERON:0009034,2.89e-12,3;UBERON:0002095,2.89e-12,3;UBERON:0004782,2.89e-12,3;UBERON:0003281,2.89e-12,3;UBERON:0009664,2.89e-12,3;UBERON:0002296,2.89e-12,3;UBERON:0005602,2.89e-12,3;UBERON:0001179,2.89e-12,3;UBERON:0006293,2.89e-12,3;UBERON:0000970,2.86e-07,21;UBERON:0002104,2.86e-07,21;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
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|short_description=p2@ENST00000457628 | |short_description=p2@ENST00000457628 | ||
}} | }} |
Latest revision as of 15:14, 24 July 2015
Short description: | p2@ENST00000457628 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000457628_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -36bp_to_ENST00000457628_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.04e-66 | 2 |
regional part of epithalamus | 1.04e-66 | 2 |
secretory circumventricular organ | 1.04e-66 | 2 |
circumventricular organ | 1.04e-66 | 2 |
epithalamus | 1.04e-66 | 2 |
gland of diencephalon | 5.06e-34 | 4 |
neuroendocrine gland | 5.06e-34 | 4 |
regional part of diencephalon | 5.06e-34 | 4 |
diencephalon | 5.89e-20 | 7 |
future diencephalon | 5.89e-20 | 7 |
spleen | 2.89e-12 | 3 |
gastrointestinal system mesentery | 2.89e-12 | 3 |
stomach region | 2.89e-12 | 3 |
mesentery | 2.89e-12 | 3 |
gastrointestinal system serosa | 2.89e-12 | 3 |
mesentery of stomach | 2.89e-12 | 3 |
gut mesentery | 2.89e-12 | 3 |
dorsal mesentery | 2.89e-12 | 3 |
dorsal mesogastrium | 2.89e-12 | 3 |
peritoneal cavity | 2.89e-12 | 3 |
spleen primordium | 2.89e-12 | 3 |
eye | 2.86e-07 | 21 |
visual system | 2.86e-07 | 21 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.44e-09 | 4 |