FFCP PHASE1:Hg19::chr10:30780388..30780412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30780388..30780412,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:30780388..30780412,+ | |description=CAGE_peak_at_chr10:30780388..30780412,+ | ||
|id=chr10:30780388..30780412,+ | |id=chr10:30780388..30780412,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.52e-107!42;CL:0000860!1.43e-99!45;CL:0000766!3.40e-72!76;CL:0002194!2.69e-71!63;CL:0000576!2.69e-71!63;CL:0000040!2.69e-71!63;CL:0000559!2.69e-71!63;CL:0002009!7.38e-69!65;CL:0000557!5.32e-66!71;CL:0000839!2.31e-63!70;CL:0000738!1.82e-50!140;CL:0000763!1.24e-48!112;CL:0000049!1.24e-48!112;CL:0002087!1.13e-47!119;CL:0000037!3.83e-41!172;CL:0000566!3.83e-41!172;CL:0002031!2.48e-38!124;CL:0000988!2.61e-38!182;CL:0002032!2.47e-35!165;CL:0000837!2.47e-35!165;CL:0000134!3.84e-15!358;CL:0002320!1.21e-14!365;CL:0002393!1.46e-14!9;CL:0002397!1.46e-14!9;CL:0000219!1.01e-13!390;CL:0000767!5.82e-12!3;CL:0000842!1.01e-11!3;CL:0000034!1.25e-11!444;CL:0000048!8.86e-11!430;CL:0000723!1.76e-10!436;CL:0000224!6.75e-09!4;CL:0000094!1.68e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.52e-107!42;CL:0000860!1.43e-99!45;CL:0000766!3.40e-72!76;CL:0002194!2.69e-71!63;CL:0000576!2.69e-71!63;CL:0000040!2.69e-71!63;CL:0000559!2.69e-71!63;CL:0002009!7.38e-69!65;CL:0000557!5.32e-66!71;CL:0000839!2.31e-63!70;CL:0000738!1.82e-50!140;CL:0000763!1.24e-48!112;CL:0000049!1.24e-48!112;CL:0002087!1.13e-47!119;CL:0000037!3.83e-41!172;CL:0000566!3.83e-41!172;CL:0002031!2.48e-38!124;CL:0000988!2.61e-38!182;CL:0002032!2.47e-35!165;CL:0000837!2.47e-35!165;CL:0000134!3.84e-15!358;CL:0002320!1.21e-14!365;CL:0002393!1.46e-14!9;CL:0002397!1.46e-14!9;CL:0000219!1.01e-13!390;CL:0000767!5.82e-12!3;CL:0000842!1.01e-11!3;CL:0000034!1.25e-11!444;CL:0000048!8.86e-11!430;CL:0000723!1.76e-10!436;CL:0000224!6.75e-09!4;CL:0000094!1.68e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.34e-83;33!CL:0002057;3.34e-83;33!CL:0000473;2.46e-57;39!CL:0000234;2.46e-57;39!CL:0000576;6.47e-49;48!CL:0000766;1.23e-32;69!CL:0002087;1.15e-18;104!CL:0000763;9.43e-17;100!CL:0000767;7.15e-16;3!CL:0000226;1.65e-15;3!CL:0000842;1.65e-15;3!CL:0002393;2.35e-14;6!CL:0002397;2.35e-14;6!CL:0000738;1.57e-11;136!CL:0000623;2.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-96,42;CL:0002057,1.37e-96,42;CL:0000473,9.55e-84,48;CL:0000234,9.55e-84,48;CL:0002194,9.26e-66,59;CL:0000576,9.26e-66,59;CL:0000040,9.26e-66,59;CL:0000559,9.26e-66,59;CL:0000766,2.46e-65,72;CL:0002009,1.94e-63,61;CL:0000557,1.99e-61,67;CL:0000839,3.06e-58,66;CL:0000763,2.05e-44,108;CL:0000049,2.05e-44,108;CL:0002087,4.69e-44,115;CL:0000738,5.77e-44,136;CL:0000037,1.89e-36,168;CL:0000988,3.01e-34,177;CL:0002031,3.81e-34,120;CL:0002032,1.09e-31,161;CL:0000837,1.09e-31,161;CL:0000767,8.99e-16,3;CL:0000226,1.91e-15,3;CL:0000842,1.91e-15,3;CL:0000134,1.49e-13,354;CL:0002320,3.78e-13,361;CL:0000219,1.01e-11,386;CL:0000034,3.96e-11,441;CL:0000048,5.69e-10,427;CL:0000723,9.94e-10,433;CL:0002393,1.26e-09,9;CL:0002397,1.26e-09,9;CL:0000623,2.13e-07,3;CL:0000825,2.13e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.03e-70;42!CL:0000049;2.31e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-57!80;UBERON:0001474!5.17e-53!86;UBERON:0002390!1.77e-51!102;UBERON:0003061!1.77e-51!102;UBERON:0002193!1.68e-48!112;UBERON:0004765!7.60e-44!101;UBERON:0001434!7.60e-44!101;UBERON:0002405!1.33e-39!115;UBERON:0002204!5.61e-23!167;UBERON:0003081!1.63e-20!216;UBERON:0002384!5.81e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!1.25e-57!80;UBERON:0001474!5.17e-53!86;UBERON:0002390!1.77e-51!102;UBERON:0003061!1.77e-51!102;UBERON:0002193!1.68e-48!112;UBERON:0004765!7.60e-44!101;UBERON:0001434!7.60e-44!101;UBERON:0002405!1.33e-39!115;UBERON:0002204!5.61e-23!167;UBERON:0003081!1.63e-20!216;UBERON:0002384!5.81e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.66e-53,76;UBERON:0002390,1.82e-49,98;UBERON:0003061,1.82e-49,98;UBERON:0001474,3.53e-49,82;UBERON:0002193,2.59e-44,108;UBERON:0004765,2.71e-44,90;UBERON:0002405,1.12e-42,93;UBERON:0001434,2.82e-39,100;UBERON:0002204,4.78e-21,167;UBERON:0003081,1.63e-20,203;UBERON:0002384,1.35e-12,371;UBERON:0000926,8.34e-11,315;UBERON:0004120,8.34e-11,315;UBERON:0006603,8.34e-11,315 | |||
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| ||
|short_description=p@chr10:30780388..30780412,+ | |short_description=p@chr10:30780388..30780412,+ | ||
}} | }} |
Latest revision as of 13:07, 23 July 2015
Short description: | p@chr10:30780388..30780412, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30780388..30780412, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.66e-53 | 76 |
hematopoietic system | 1.82e-49 | 98 |
blood island | 1.82e-49 | 98 |
bone element | 3.53e-49 | 82 |
hemolymphoid system | 2.59e-44 | 108 |
skeletal element | 2.71e-44 | 90 |
immune system | 1.12e-42 | 93 |
skeletal system | 2.82e-39 | 100 |
musculoskeletal system | 4.78e-21 | 167 |
lateral plate mesoderm | 1.63e-20 | 203 |
connective tissue | 1.35e-12 | 371 |
mesoderm | 8.34e-11 | 315 |
mesoderm-derived structure | 8.34e-11 | 315 |
presumptive mesoderm | 8.34e-11 | 315 |