FFCP PHASE1:Hg19::chr14:35666470..35666478,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:35666470..35666478,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr14:35666470..35666478,+ | |description=CAGE_peak_at_chr14:35666470..35666478,+ | ||
|id=chr14:35666470..35666478,+ | |id=chr14:35666470..35666478,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.39e-30!42;CL:0000860!1.38e-27!45;CL:0000738!7.82e-25!140;CL:0000766!1.53e-24!76;CL:0000557!1.80e-24!71;CL:0000839!6.64e-21!70;CL:0002009!1.25e-20!65;CL:0002031!9.84e-20!124;CL:0000037!2.62e-18!172;CL:0000566!2.62e-18!172;CL:0000988!7.35e-18!182;CL:0002194!1.31e-17!63;CL:0000576!1.31e-17!63;CL:0000040!1.31e-17!63;CL:0000559!1.31e-17!63;CL:0000763!5.67e-17!112;CL:0000049!5.67e-17!112;CL:0002087!3.19e-16!119;CL:0002032!4.99e-16!165;CL:0000837!4.99e-16!165;CL:0000134!8.74e-13!358;CL:0002320!2.71e-12!365;CL:0000219!1.46e-10!390;CL:0000767!1.87e-10!3;CL:0000623!8.10e-10!3;CL:0000825!8.10e-10!3;CL:0000048!4.23e-09!430;CL:0000034!4.50e-09!444;CL:0000723!8.48e-09!436;CL:0001014!3.77e-07!2;CL:0001016!3.77e-07!2 | |ontology_enrichment_celltype=CL:0002057!5.39e-30!42;CL:0000860!1.38e-27!45;CL:0000738!7.82e-25!140;CL:0000766!1.53e-24!76;CL:0000557!1.80e-24!71;CL:0000839!6.64e-21!70;CL:0002009!1.25e-20!65;CL:0002031!9.84e-20!124;CL:0000037!2.62e-18!172;CL:0000566!2.62e-18!172;CL:0000988!7.35e-18!182;CL:0002194!1.31e-17!63;CL:0000576!1.31e-17!63;CL:0000040!1.31e-17!63;CL:0000559!1.31e-17!63;CL:0000763!5.67e-17!112;CL:0000049!5.67e-17!112;CL:0002087!3.19e-16!119;CL:0002032!4.99e-16!165;CL:0000837!4.99e-16!165;CL:0000134!8.74e-13!358;CL:0002320!2.71e-12!365;CL:0000219!1.46e-10!390;CL:0000767!1.87e-10!3;CL:0000623!8.10e-10!3;CL:0000825!8.10e-10!3;CL:0000048!4.23e-09!430;CL:0000034!4.50e-09!444;CL:0000723!8.48e-09!436;CL:0001014!3.77e-07!2;CL:0001016!3.77e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.32e-22;5!CL:0002541;1.37e-16;3!CL:0000163;1.06e-12;9!CL:0000576;5.93e-10;48!CL:0000766;6.28e-09;69!CL:0002393;9.26e-09;6!CL:0002397;9.26e-09;6!CL:0000860;4.29e-08;33!CL:0002057;4.29e-08;33!CL:0001014;2.91e-07;2!CL:0001016;2.91e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.32e-22,5;CL:0002028,2.32e-22,5;CL:0000557,1.66e-19,67;CL:0000766,4.25e-18,72;CL:0002541,1.74e-16,3;CL:0000839,2.59e-16,66;CL:0000763,5.58e-14,108;CL:0000049,5.58e-14,108;CL:0000860,5.26e-13,42;CL:0002057,5.26e-13,42;CL:0000738,8.90e-13,136;CL:0000163,1.06e-12,9;CL:0002031,2.23e-12,120;CL:0000473,2.64e-11,48;CL:0000234,2.64e-11,48;CL:0002009,3.31e-11,61;CL:0002032,1.57e-10,161;CL:0000837,1.57e-10,161;CL:0000037,5.11e-10,168;CL:0000988,2.03e-09,177;CL:0002194,6.40e-09,59;CL:0000576,6.40e-09,59;CL:0000040,6.40e-09,59;CL:0000559,6.40e-09,59;CL:0001014,3.28e-07,2;CL:0001016,3.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.80e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.32e-21!80;UBERON:0002390!2.05e-20!102;UBERON:0003061!2.05e-20!102;UBERON:0001474!5.63e-19!86;UBERON:0002193!7.04e-18!112;UBERON:0004765!1.94e-16!101;UBERON:0001434!1.94e-16!101;UBERON:0002405!1.56e-13!115;UBERON:0002384!1.27e-11!375;UBERON:0003081!7.30e-09!216;UBERON:0002204!1.16e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.37e-16;3!UBERON:0000920;1.37e-16;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.61e-17,76;UBERON:0000920,1.74e-16,3;UBERON:0001474,9.98e-16,82;UBERON:0004765,3.22e-14,90;UBERON:0002405,1.02e-13,93;UBERON:0002390,5.94e-13,98;UBERON:0003061,5.94e-13,98;UBERON:0001434,1.15e-12,100;UBERON:0002193,1.25e-11,108;UBERON:0003124,1.38e-07,7;UBERON:0002204,5.15e-07,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,0.928896739896456,0,0,0,0,0,0,1.66198622559563,0.401088894940283,2.82114131930607,0,0,0,0,0,0,0,0,0.619412741790207,0,0.768482119587302,1.6553756092201,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0.580418477257168,0.56738522469114,0,1.00499466102697,2.60741459210101,1.73751075764093,0,0,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0,0,0,0,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,5.59785911960085,6.3412779503463,9.84690980725764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,1.10961172300523,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,0.928896739896456,0,0,0,0,0,0,1.66198622559563,0.401088894940283,2.82114131930607,0,0,0,0,0,0,0,0,0.619412741790207,0,0.768482119587302,1.6553756092201,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0.320929027076094,0.639337125799041,0.329851300186716,0.398927315243264,0,0.580418477257168,0.56738522469114,0,1.00499466102697,2.60741459210101,1.73751075764093,0,0,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0,0,0,0,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,5.59785911960085,6.3412779503463,9.84690980725764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,1.10961172300523,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:35666470..35666478,+ | |short_description=p@chr14:35666470..35666478,+ | ||
}} | }} |
Latest revision as of 20:21, 24 July 2015
Short description: | p@chr14:35666470..35666478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:35666470..35666478, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.32e-22 | 5 |
basophil mast progenitor cell | 2.32e-22 | 5 |
granulocyte monocyte progenitor cell | 1.66e-19 | 67 |
myeloid leukocyte | 4.25e-18 | 72 |
chorionic membrane mesenchymal stem cell | 1.74e-16 | 3 |
myeloid lineage restricted progenitor cell | 2.59e-16 | 66 |
myeloid cell | 5.58e-14 | 108 |
common myeloid progenitor | 5.58e-14 | 108 |
classical monocyte | 5.26e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.26e-13 | 42 |
leukocyte | 8.90e-13 | 136 |
endocrine cell | 1.06e-12 | 9 |
hematopoietic lineage restricted progenitor cell | 2.23e-12 | 120 |
defensive cell | 2.64e-11 | 48 |
phagocyte | 2.64e-11 | 48 |
macrophage dendritic cell progenitor | 3.31e-11 | 61 |
hematopoietic oligopotent progenitor cell | 1.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-10 | 161 |
hematopoietic stem cell | 5.11e-10 | 168 |
hematopoietic cell | 2.03e-09 | 177 |
monopoietic cell | 6.40e-09 | 59 |
monocyte | 6.40e-09 | 59 |
monoblast | 6.40e-09 | 59 |
promonocyte | 6.40e-09 | 59 |
CD1a-positive Langerhans cell | 3.28e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.61e-17 | 76 |
egg chorion | 1.74e-16 | 3 |
bone element | 9.98e-16 | 82 |
skeletal element | 3.22e-14 | 90 |
immune system | 1.02e-13 | 93 |
hematopoietic system | 5.94e-13 | 98 |
blood island | 5.94e-13 | 98 |
skeletal system | 1.15e-12 | 100 |
hemolymphoid system | 1.25e-11 | 108 |
chorion | 1.38e-07 | 7 |
musculoskeletal system | 5.15e-07 | 167 |