FFCP PHASE1:Hg19::chr10:4822880..4822903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4822880..4822903,- | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr10:4822880..4822903,- | |description=CAGE_peak_at_chr10:4822880..4822903,- | ||
|id=chr10:4822880..4822903,- | |id=chr10:4822880..4822903,- | ||
|ontology_enrichment_celltype=CL:0000115!2.84e-26!35;CL:0002139!4.10e-26!24;CL:0002078!4.10e-20!44;CL:0005020!3.02e-17!6;CL:0002138!3.02e-17!6;CL:0005022!3.02e-17!6;CL:0000213!1.15e-14!57;CL:0000215!1.15e-14!57;CL:0000071!2.51e-13!18;CL:0002546!2.51e-13!18;CL:0000222!6.00e-09!119;CL:0000066!2.98e-08!254;CL:1000413!1.95e-07!9;CL:0000220!4.03e-07!246;CL:0002321!5.15e-07!248;CL:0002544!8.74e-07!6;CL:0002166!9.24e-07!3 | |ontology_enrichment_celltype=CL:0000115!2.84e-26!35;CL:0002139!4.10e-26!24;CL:0002078!4.10e-20!44;CL:0005020!3.02e-17!6;CL:0002138!3.02e-17!6;CL:0005022!3.02e-17!6;CL:0000213!1.15e-14!57;CL:0000215!1.15e-14!57;CL:0000071!2.51e-13!18;CL:0002546!2.51e-13!18;CL:0000222!6.00e-09!119;CL:0000066!2.98e-08!254;CL:1000413!1.95e-07!9;CL:0000220!4.03e-07!246;CL:0002321!5.15e-07!248;CL:0002544!8.74e-07!6;CL:0002166!9.24e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.58e-17;3!CL:0002138;3.34e-09;6!CL:0002139;1.59e-08;24!CL:0000115;9.21e-08;36!CL:0000054;1.93e-07;2!CL:0002545;1.93e-07;2!CL:0000137;1.93e-07;2!CL:0000092;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.64e-17,3;CL:0005020,3.14e-09,6;CL:0002138,3.14e-09,6;CL:0005022,3.14e-09,6;CL:0000115,1.64e-08,36;CL:0002139,1.69e-08,24;CL:0000054,1.64e-07,2;CL:0000137,1.64e-07,2;CL:0000092,1.64e-07,2;CL:0002545,2.40e-07,2;CL:0002078,8.64e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;3.34e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;4.53e-14;1!DOID:0060085;1.33e-13;1!DOID:3165;1.33e-13;1!DOID:0060121;1.33e-13;1!DOID:2438;1.33e-13;1!DOID:4418;1.33e-13;1!DOID:201;2.83e-09;6!DOID:0060100;2.83e-09;6!DOID:4074;1.27e-07;2!DOID:4905;1.27e-07;2!DOID:3498;1.27e-07;2!DOID:200;1.93e-07;2!DOID:4305;1.93e-07;2!DOID:4468;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,4.53e-14,1;DOID:0060085,9.73e-14,1;DOID:3165,9.73e-14,1;DOID:0060121,9.73e-14,1;DOID:2438,9.73e-14,1;DOID:4418,9.73e-14,1;DOID:201,2.56e-09,6;DOID:0060100,2.56e-09,6;DOID:4074,1.20e-07,2;DOID:4905,1.20e-07,2;DOID:3498,1.20e-07,2;DOID:4468,1.54e-07,2;DOID:200,1.64e-07,2;DOID:4305,1.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.97e-19!69;UBERON:0002049!7.86e-16!79;UBERON:0007798!7.86e-16!79;UBERON:0001986!2.51e-13!18;UBERON:0004638!2.51e-13!18;UBERON:0004852!2.51e-13!18;UBERON:0001473!7.26e-13!8;UBERON:0004536!7.26e-13!8;UBERON:0006558!7.26e-13!8;UBERON:0004535!1.30e-12!110;UBERON:0001009!3.86e-12!113;UBERON:0001981!8.23e-12!60;UBERON:0007500!8.23e-12!60;UBERON:0004537!8.23e-12!60;UBERON:0006965!8.23e-12!60;UBERON:0000487!1.15e-10!22;UBERON:0002465!3.13e-10!10;UBERON:0003914!4.79e-10!118;UBERON:0004872!5.48e-10!84;UBERON:0006914!3.15e-09!25;UBERON:0004111!7.78e-09!241;UBERON:0001637!9.09e-08!42;UBERON:0003509!9.09e-08!42;UBERON:0004572!9.09e-08!42;UBERON:0003915!1.95e-07!9;UBERON:0004700!1.95e-07!9;UBERON:0001917!1.95e-07!9;UBERON:0000477!4.98e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.14e-13;4!UBERON:0008895;2.14e-13;4!UBERON:0011159;6.63e-11;5!UBERON:0004765;6.46e-08;26!UBERON:0005800;1.93e-07;2!UBERON:0001515;1.93e-07;2!UBERON:0001473;4.08e-07;8!UBERON:0004536;4.08e-07;8!UBERON:0006558;4.08e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.21e-13,4;UBERON:0008895,2.21e-13,4;UBERON:0011159,6.80e-11,5;UBERON:0010188,3.14e-09,6;UBERON:0002539,3.14e-09,6;UBERON:0008816,3.14e-09,6;UBERON:0005800,2.40e-07,2;UBERON:0001515,2.40e-07,2;UBERON:0001473,3.90e-07,8;UBERON:0004536,3.90e-07,8;UBERON:0006558,3.90e-07,8 | |||
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| ||
|short_description=p@chr10:4822880..4822903,- | |short_description=p@chr10:4822880..4822903,- | ||
}} | }} |
Latest revision as of 13:52, 23 July 2015
Short description: | p@chr10:4822880..4822903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4822880..4822903, - |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.64e-17 | 3 |
lymphangioblast | 3.14e-09 | 6 |
endothelial cell of lymphatic vessel | 3.14e-09 | 6 |
vascular lymphangioblast | 3.14e-09 | 6 |
endothelial cell | 1.64e-08 | 36 |
endothelial cell of vascular tree | 1.69e-08 | 24 |
bone matrix secreting cell | 1.64e-07 | 2 |
osteocyte | 1.64e-07 | 2 |
osteoclast | 1.64e-07 | 2 |
thoracic aorta endothelial cell | 2.40e-07 | 2 |
meso-epithelial cell | 8.64e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.21e-13 | 4 |
splanchnocranium | 2.21e-13 | 4 |
primary subdivision of cranial skeletal system | 6.80e-11 | 5 |
protuberance | 3.14e-09 | 6 |
pharyngeal arch | 3.14e-09 | 6 |
embryonic head | 3.14e-09 | 6 |
segment of aorta | 2.40e-07 | 2 |
thoracic aorta | 2.40e-07 | 2 |
lymphatic vessel | 3.90e-07 | 8 |
lymph vasculature | 3.90e-07 | 8 |
lymphatic part of lymphoid system | 3.90e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 4.53e-14 | 1 |
organ system benign neoplasm | 9.73e-14 | 1 |
skin benign neoplasm | 9.73e-14 | 1 |
integumentary system benign neoplasm | 9.73e-14 | 1 |
dermis tumor | 9.73e-14 | 1 |
cutaneous fibrous histiocytoma | 9.73e-14 | 1 |
connective tissue cancer | 2.56e-09 | 6 |
musculoskeletal system cancer | 2.56e-09 | 6 |
pancreas adenocarcinoma | 1.20e-07 | 2 |
pancreatic carcinoma | 1.20e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.20e-07 | 2 |
clear cell adenocarcinoma | 1.54e-07 | 2 |
giant cell tumor | 1.64e-07 | 2 |
bone giant cell tumor | 1.64e-07 | 2 |