FFCP PHASE1:Hg19::chr14:54425475..54425500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=652 | |EntrezGene=652 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1071 | |HGNC=1071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559642_5end | |association_with_transcript=0bp_to_ENST00000559642_5end | ||
|cluster_id=chr14:54425475..54425500,- | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_8_at_BMP4_5end | |description=CAGE_peak_8_at_BMP4_5end | ||
|id=chr14:54425475..54425500,- | |id=chr14:54425475..54425500,- | ||
|ontology_enrichment_celltype=CL:0000223!3.13e-19!59;CL:0002563!4.70e-19!4;CL:0000181!2.00e-14!12;CL:0000417!2.00e-14!12;CL:0000668!2.00e-14!12;CL:0000414!2.00e-14!12;CL:0000412!2.00e-14!12;CL:0000182!2.00e-14!12;CL:0002253!2.27e-10!2;CL:0002251!2.10e-08!21;CL:0002178!2.19e-07!3;CL:0002231!2.63e-07!3;CL:0002076!4.65e-07!43 | |ontology_enrichment_celltype=CL:0000223!3.13e-19!59;CL:0002563!4.70e-19!4;CL:0000181!2.00e-14!12;CL:0000417!2.00e-14!12;CL:0000668!2.00e-14!12;CL:0000414!2.00e-14!12;CL:0000412!2.00e-14!12;CL:0000182!2.00e-14!12;CL:0002253!2.27e-10!2;CL:0002251!2.10e-08!21;CL:0002178!2.19e-07!3;CL:0002231!2.63e-07!3;CL:0002076!4.65e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002563;6.47e-29;4!CL:0000182;4.58e-22;12!CL:0002253;2.37e-15;2!CL:0002251;2.14e-13;20!CL:0002076;3.02e-11;42!CL:0002178;8.57e-11;3!CL:0002231;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.61e-29,4;CL:0000223,4.74e-24,58;CL:0000182,4.42e-22,12;CL:0002253,2.37e-15,2;CL:0002251,2.10e-13,20;CL:0002076,3.23e-11,42;CL:0002178,8.99e-11,3;CL:0002231,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.43e-24;11!UBERON:0009497;1.96e-20;13!UBERON:0003104;5.27e-15;31!CL:0000223;8.55e-14;58!UBERON:0001041;2.80e-09;30 | |||
|ontology_enrichment_disease=DOID:3493!1.89e-10!2;DOID:4929!2.72e-10!2;DOID:299!4.05e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.66e-15;2!DOID:3119;4.66e-09;14!DOID:7;1.23e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.78e-15,2;DOID:3119,4.75e-09,14;DOID:7,2.73e-07,39;DOID:305,5.20e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001242!4.70e-19!4;UBERON:0001262!4.70e-19!4;UBERON:0004786!4.70e-19!4;UBERON:0004808!4.70e-19!4;UBERON:0001277!4.70e-19!4;UBERON:0003929!3.84e-16!54;UBERON:0003350!1.88e-15!5;UBERON:0005409!1.30e-12!35;UBERON:0009497!5.23e-12!25;UBERON:0000015!5.23e-12!25;UBERON:0002423!5.23e-12!25;UBERON:0006235!5.23e-12!25;UBERON:0004161!5.23e-12!25;UBERON:0001007!5.94e-11!155;UBERON:0001555!5.94e-11!155;UBERON:0007026!5.94e-11!155;UBERON:0004921!1.01e-10!129;UBERON:0004185!1.01e-10!129;UBERON:0000160!1.26e-10!27;UBERON:0005911!1.59e-10!82;UBERON:0004119!5.43e-10!169;UBERON:0000925!5.43e-10!169;UBERON:0006595!5.43e-10!169;UBERON:0002107!2.44e-09!19;UBERON:0006925!2.44e-09!19;UBERON:0008836!2.44e-09!19;UBERON:0000485!5.20e-09!9;UBERON:0000077!1.93e-08!130;UBERON:0005172!2.61e-08!55;UBERON:0005173!2.61e-08!55;UBERON:0008835!3.84e-08!22;UBERON:0003894!3.84e-08!22;UBERON:0009854!8.21e-08!23;UBERON:0002417!1.71e-07!61;UBERON:0000916!1.71e-07!61;UBERON:0007499!3.14e-07!25;UBERON:0002110!3.16e-07!3;UBERON:0006242!3.16e-07!3;UBERON:0000344!5.64e-07!12;UBERON:0000060!5.64e-07!12;UBERON:0005057!5.69e-07!26;UBERON:0009856!5.69e-07!26;UBERON:0000949!8.25e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;6.47e-29;4!UBERON:0001262;6.47e-29;4!UBERON:0004786;6.47e-29;4!UBERON:0004808;6.47e-29;4!UBERON:0001277;6.47e-29;4!UBERON:0000485;5.13e-17;7!UBERON:0003929;5.13e-17;7!UBERON:0003350;5.04e-15;8!UBERON:0002107;3.09e-14;19!UBERON:0006925;3.09e-14;19!UBERON:0005409;9.56e-12;22!UBERON:0002423;5.37e-11;25!UBERON:0002365;2.27e-08;31!UBERON:0002330;2.27e-08;31!UBERON:0001052;2.43e-08;4!UBERON:0004921;2.86e-08;33!UBERON:0002368;6.52e-08;33!UBERON:0000160;3.24e-07;17!UBERON:0000945;5.54e-07;5!UBERON:0010039;5.54e-07;5!UBERON:0004907;6.39e-07;5!UBERON:0001007;7.49e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.61e-29,4;UBERON:0001262,5.61e-29,4;UBERON:0004786,5.61e-29,4;UBERON:0004808,5.61e-29,4;UBERON:0001277,5.61e-29,4;UBERON:0003929,4.39e-19,54;UBERON:0003350,4.69e-15,8;UBERON:0002107,3.02e-14,19;UBERON:0006925,3.02e-14,19;UBERON:0008836,3.02e-14,19;UBERON:0000485,1.69e-13,9;UBERON:0005911,1.14e-12,82;UBERON:0008835,2.09e-12,22;UBERON:0003894,2.09e-12,22;UBERON:0009854,6.73e-12,23;UBERON:0004921,7.31e-12,118;UBERON:0007499,5.28e-11,25;UBERON:0009497,5.28e-11,25;UBERON:0000015,5.28e-11,25;UBERON:0002423,5.28e-11,25;UBERON:0006235,5.28e-11,25;UBERON:0004161,5.28e-11,25;UBERON:0009856,1.31e-10,26;UBERON:0005409,1.76e-10,25;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0002365,5.24e-09,31;UBERON:0002330,5.24e-09,31;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0001052,2.43e-08,4;UBERON:0002530,3.43e-08,59;UBERON:0002368,4.72e-08,35;UBERON:0000160,3.14e-07,17;UBERON:0000490,4.31e-07,148;UBERON:0004907,6.39e-07,5;UBERON:0001046,7.18e-07,19 | |||
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|short_description=p8@BMP4 | |short_description=p8@BMP4 | ||
}} | }} |
Latest revision as of 07:40, 20 September 2015
Short description: | p8@BMP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BMP4_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000559642_5end |
EntrezGene: | BMP4 |
HGNC: | 1071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.61e-29 | 4 |
endodermal cell | 4.74e-24 | 58 |
hepatocyte | 4.42e-22 | 12 |
epithelial cell of large intestine | 2.37e-15 | 2 |
epithelial cell of alimentary canal | 2.10e-13 | 20 |
endo-epithelial cell | 3.23e-11 | 42 |
epithelial cell of stomach | 8.99e-11 | 3 |
epithelial cell of prostate | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.78e-15 | 2 |
gastrointestinal system cancer | 4.75e-09 | 14 |
disease of anatomical entity | 2.73e-07 | 39 |
carcinoma | 5.20e-07 | 106 |