FFCP PHASE1:Hg19::chr14:64676324..64676332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23224 | |EntrezGene=23224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17084 | |HGNC=17084 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554997_5end | |association_with_transcript=0bp_to_ENST00000554997_5end | ||
|cluster_id=chr14:64676324..64676332,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_14_at_SYNE2_5end | |description=CAGE_peak_14_at_SYNE2_5end | ||
|id=chr14:64676324..64676332,+ | |id=chr14:64676324..64676332,+ | ||
|ontology_enrichment_celltype=CL:0000784!1.59e-09!3 | |ontology_enrichment_celltype=CL:0000784!1.59e-09!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.78e-26;1!UBERON:0004140;4.06e-26;1!UBERON:0008947;2.03e-08;29!UBERON:0001041;3.69e-08;30 | |||
|ontology_enrichment_disease=DOID:114!1.12e-13!2;DOID:12603!1.30e-07!1;DOID:178!1.80e-07!1;DOID:326!1.80e-07!1;DOID:3978!1.80e-07!1;DOID:3394!1.80e-07!1;DOID:5844!1.80e-07!1;DOID:1287!2.89e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.37e-13;2!DOID:1287;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.55e-13,2;DOID:1287,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.30e-18!3;UBERON:0004854!1.30e-18!3;UBERON:0009034!1.30e-18!3;UBERON:0002095!1.30e-18!3;UBERON:0004782!1.30e-18!3;UBERON:0003281!1.30e-18!3;UBERON:0009664!1.30e-18!3;UBERON:0002296!1.30e-18!3;UBERON:0005602!1.30e-18!3;UBERON:0001179!1.30e-18!3;UBERON:0006293!1.30e-18!3;UBERON:0007023!1.12e-15!115;UBERON:0003127!1.98e-13!2;UBERON:0007100!6.66e-11!27;UBERON:0003978!1.59e-09!3;UBERON:0009751!1.59e-09!3;UBERON:0000946!1.59e-09!3;UBERON:0002523!1.59e-09!3;UBERON:0005983!1.59e-09!3;UBERON:0002165!1.59e-09!3;UBERON:0002062!1.59e-09!3;UBERON:0007280!1.59e-09!3;UBERON:0001896!4.18e-09!3;UBERON:0005290!4.18e-09!3;UBERON:0010096!4.18e-09!3;UBERON:0004177!2.77e-08!7;UBERON:0002171!4.28e-08!1;UBERON:0006518!4.28e-08!1;UBERON:0008949!4.28e-08!1;UBERON:0000101!4.28e-08!1;UBERON:0002167!4.28e-08!1;UBERON:0002079!4.57e-08!1;UBERON:0002135!7.76e-08!1;UBERON:0002146!1.07e-07!1;UBERON:0005623!1.07e-07!1;UBERON:0000945!2.63e-07!8;UBERON:0010039!2.63e-07!8;UBERON:0002372!2.80e-07!1;UBERON:0001961!2.80e-07!1;UBERON:0001744!2.80e-07!1;UBERON:0001735!2.80e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.16e-26;1!UBERON:0006518;2.16e-26;1!UBERON:0008949;2.16e-26;1!UBERON:0000101;2.16e-26;1!UBERON:0002167;2.16e-26;1!UBERON:0002079;2.78e-26;1!UBERON:0002081;7.30e-14;2!UBERON:0002048;6.81e-11;22!UBERON:0000117;6.81e-11;22!UBERON:0000171;6.81e-11;22!UBERON:0000170;6.81e-11;22!UBERON:0004151;1.10e-09;3!UBERON:0007100;1.26e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.16e-26,1;UBERON:0006518,2.16e-26,1;UBERON:0008949,2.16e-26,1;UBERON:0000101,2.16e-26,1;UBERON:0002167,2.16e-26,1;UBERON:0002079,2.78e-26,1;UBERON:0002081,7.30e-14,2;UBERON:0010227,7.30e-14,2;UBERON:0002048,6.70e-11,22;UBERON:0000117,6.70e-11,22;UBERON:0000171,6.70e-11,22;UBERON:0000170,6.70e-11,22;UBERON:0005597,6.70e-11,22;UBERON:0000118,6.70e-11,22;UBERON:0004151,1.10e-09,3;UBERON:0007100,6.06e-09,27;UBERON:0005178,2.83e-07,34;UBERON:0002224,2.83e-07,34;UBERON:0005181,4.39e-07,35;UBERON:0005153,9.87e-07,37 | |||
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|short_description=p14@SYNE2 | |short_description=p14@SYNE2 | ||
}} | }} |
Latest revision as of 01:05, 25 September 2015
Short description: | p14@SYNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SYNE2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000554997_5end |
EntrezGene: | SYNE2 |
HGNC: | 17084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.16e-26 | 1 |
right lung lobe | 2.16e-26 | 1 |
lower lobe of lung | 2.16e-26 | 1 |
lobe of lung | 2.16e-26 | 1 |
right lung | 2.16e-26 | 1 |
left cardiac atrium | 2.78e-26 | 1 |
cardiac atrium | 7.30e-14 | 2 |
future cardiac atrium | 7.30e-14 | 2 |
lung | 6.70e-11 | 22 |
respiratory tube | 6.70e-11 | 22 |
respiration organ | 6.70e-11 | 22 |
pair of lungs | 6.70e-11 | 22 |
lung primordium | 6.70e-11 | 22 |
lung bud | 6.70e-11 | 22 |
cardiac chamber | 1.10e-09 | 3 |
primary circulatory organ | 6.06e-09 | 27 |
thoracic cavity element | 2.83e-07 | 34 |
thoracic cavity | 2.83e-07 | 34 |
thoracic segment organ | 4.39e-07 | 35 |
epithelial bud | 9.87e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.55e-13 | 2 |
cardiovascular system disease | 2.04e-07 | 4 |