FFCP PHASE1:Hg19::chr15:29745140..29745158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23359 | |EntrezGene=23359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29075 | |HGNC=29075 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-137bp_to_ENST00000560082_5end | |association_with_transcript=-137bp_to_ENST00000560082_5end | ||
|cluster_id=chr15:29745140..29745158,- | |||
|coexpression_cluster_id=C203 | |||
|description=CAGE_peak_2_at_FAM189A1_5end | |description=CAGE_peak_2_at_FAM189A1_5end | ||
|id=chr15:29745140..29745158,- | |id=chr15:29745140..29745158,- | ||
|ontology_enrichment_celltype=CL:0000708!5.04e-08!3 | |ontology_enrichment_celltype=CL:0000708!5.04e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000082;4.72e-10;19!CL:0000322;4.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,4.87e-10,19;CL:0000322,4.84e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.77e-07;29 | |||
|ontology_enrichment_disease=DOID:1325!3.62e-08!7;DOID:3904!3.62e-08!7;DOID:9119!2.36e-07!1;DOID:5409!8.51e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1325;4.47e-26;7!DOID:3904;4.47e-26;7!DOID:9119;2.30e-21;1!DOID:5409;1.28e-20;4!DOID:3905;1.85e-20;9!DOID:1324;1.46e-12;15!DOID:0050615;8.10e-12;16!DOID:3910;2.02e-11;2!DOID:8692;4.89e-11;31!DOID:1240;6.98e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,4.87e-26,7;DOID:3904,4.87e-26,7;DOID:9119,2.30e-21,1;DOID:5409,1.41e-20,4;DOID:3905,1.98e-20,9;DOID:1324,1.52e-12,15;DOID:0050615,8.41e-12,16;DOID:3910,2.02e-11,2;DOID:8692,1.09e-10,31;DOID:1240,1.46e-08,39;DOID:0050686,8.37e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003210!5.04e-08!3;UBERON:0002171!4.01e-07!1;UBERON:0006518!4.01e-07!1;UBERON:0008949!4.01e-07!1;UBERON:0000101!4.01e-07!1;UBERON:0002167!4.01e-07!1;UBERON:0002336!9.51e-07!1;UBERON:0001018!9.51e-07!1;UBERON:0002473!9.51e-07!1;UBERON:0005340!9.51e-07!1;UBERON:0002316!9.51e-07!1;UBERON:0003544!9.51e-07!1;UBERON:0001020!9.51e-07!1;UBERON:0005970!9.51e-07!1;UBERON:0002437!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.02e-11;2!UBERON:0002173;2.02e-11;2!UBERON:0002186;2.02e-11;2!UBERON:0001897;3.52e-11;2!UBERON:0010225;3.52e-11;2!UBERON:0004802;4.72e-10;19!UBERON:0000115;4.72e-10;19!UBERON:0002048;9.18e-09;22!UBERON:0004807;9.18e-09;22!UBERON:0000117;9.18e-09;22!UBERON:0000171;9.18e-09;22!UBERON:0000170;9.18e-09;22!UBERON:0004821;4.84e-08;3!UBERON:0007499;4.84e-08;3!UBERON:0003215;4.84e-08;3!UBERON:0010368;4.84e-08;3!UBERON:0009911;4.84e-08;3!UBERON:0002299;4.84e-08;3!UBERON:0006524;4.84e-08;3!UBERON:0008874;4.84e-08;3!UBERON:0002169;4.84e-08;3!UBERON:0004894;4.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.02e-11,2;UBERON:0002173,2.02e-11,2;UBERON:0002186,2.02e-11,2;UBERON:0001897,3.35e-11,2;UBERON:0010225,3.35e-11,2;UBERON:0004802,4.87e-10,19;UBERON:0000115,4.87e-10,19;UBERON:0002048,9.43e-09,22;UBERON:0000117,9.43e-09,22;UBERON:0000171,9.43e-09,22;UBERON:0000170,9.43e-09,22;UBERON:0005597,9.43e-09,22;UBERON:0000118,9.43e-09,22;UBERON:0004821,4.84e-08,3;UBERON:0003215,4.84e-08,3;UBERON:0010368,4.84e-08,3;UBERON:0009911,4.84e-08,3;UBERON:0002299,4.84e-08,3;UBERON:0006524,4.84e-08,3;UBERON:0008874,4.84e-08,3;UBERON:0002169,4.84e-08,3;UBERON:0004894,4.84e-08,3;UBERON:0004807,5.36e-07,28 | |||
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|short_description=p2@FAM189A1 | |short_description=p2@FAM189A1 | ||
}} | }} |
Latest revision as of 02:35, 17 September 2015
Short description: | p2@FAM189A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM189A1_5end |
Coexpression cluster: | C203_acute_NK_chronic_CD133_lymphoma_immature_Dendritic |
Association with transcript: | -137bp_to_ENST00000560082_5end |
EntrezGene: | FAM189A1 |
HGNC: | 29075 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 4.87e-10 | 19 |
pneumocyte | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.02e-11 | 2 |
alveolar duct | 2.02e-11 | 2 |
bronchiole | 2.02e-11 | 2 |
dorsal plus ventral thalamus | 3.35e-11 | 2 |
thalamic complex | 3.35e-11 | 2 |
respiratory tract epithelium | 4.87e-10 | 19 |
lung epithelium | 4.87e-10 | 19 |
lung | 9.43e-09 | 22 |
respiratory tube | 9.43e-09 | 22 |
respiration organ | 9.43e-09 | 22 |
pair of lungs | 9.43e-09 | 22 |
lung primordium | 9.43e-09 | 22 |
lung bud | 9.43e-09 | 22 |
pulmonary alveolus epithelium | 4.84e-08 | 3 |
alveolus | 4.84e-08 | 3 |
pulmonary lobule | 4.84e-08 | 3 |
lobule | 4.84e-08 | 3 |
alveolus of lung | 4.84e-08 | 3 |
alveolar system | 4.84e-08 | 3 |
pulmonary acinus | 4.84e-08 | 3 |
alveolar sac | 4.84e-08 | 3 |
alveolar wall | 4.84e-08 | 3 |
respiratory system epithelium | 5.36e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 4.87e-26 | 7 |
bronchogenic carcinoma | 4.87e-26 | 7 |
acute myeloid leukemia | 2.30e-21 | 1 |
lung small cell carcinoma | 1.41e-20 | 4 |
lung carcinoma | 1.98e-20 | 9 |
lung cancer | 1.52e-12 | 15 |
respiratory system cancer | 8.41e-12 | 16 |
lung adenocarcinoma | 2.02e-11 | 2 |
myeloid leukemia | 1.09e-10 | 31 |
leukemia | 1.46e-08 | 39 |
organ system cancer | 8.37e-07 | 137 |