FFCP PHASE1:Hg19::chr10:97050749..97050772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9124 | |EntrezGene=9124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2067 | |HGNC=2067 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477757_5end | |association_with_transcript=0bp_to_ENST00000477757_5end | ||
|cluster_id=chr10:97050749..97050772,- | |||
|coexpression_cluster_id=C2083 | |||
|description=CAGE_peak_1_at_PDLIM1_5end | |description=CAGE_peak_1_at_PDLIM1_5end | ||
|id=chr10:97050749..97050772,- | |id=chr10:97050749..97050772,- | ||
|ontology_enrichment_celltype=CL:0000066!1.26e-21!254;CL:0002321!8.00e-17!248;CL:0000220!1.73e-16!246;CL:0000076!2.92e-13!62;CL:0000223!1.24e-11!59;CL:0002076!2.31e-10!43;CL:0002139!8.70e-08!24;CL:0002251!3.41e-07!21;CL:0000213!4.70e-07!57;CL:0000215!4.70e-07!57;CL:0002368!9.63e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.26e-21!254;CL:0002321!8.00e-17!248;CL:0000220!1.73e-16!246;CL:0000076!2.92e-13!62;CL:0000223!1.24e-11!59;CL:0002076!2.31e-10!43;CL:0002139!8.70e-08!24;CL:0002251!3.41e-07!21;CL:0000213!4.70e-07!57;CL:0000215!4.70e-07!57;CL:0002368!9.63e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.70e-08;42!CL:0002139;8.39e-08;24!CL:0002251;4.70e-07;20!CL:0002368;9.63e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.21e-21,253;CL:0002321,5.63e-17,250;CL:0000076,1.97e-13,63;CL:0000223,1.81e-11,58;CL:0002076,3.31e-10,42;CL:0002139,8.66e-08,24;CL:0000213,3.51e-07,58;CL:0000215,3.51e-07,58;CL:0002251,4.68e-07,20;CL:0000222,9.26e-07,121;CL:0002368,9.59e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.56e-20!169;UBERON:0000925!4.56e-20!169;UBERON:0006595!4.56e-20!169;UBERON:0001007!5.60e-16!155;UBERON:0001555!5.60e-16!155;UBERON:0007026!5.60e-16!155;UBERON:0003914!7.66e-15!118;UBERON:0004921!2.95e-12!129;UBERON:0004185!2.95e-12!129;UBERON:0001009!3.74e-12!113;UBERON:0004872!1.28e-11!84;UBERON:0000477!1.47e-11!286;UBERON:0000490!1.63e-11!138;UBERON:0000077!3.52e-11!130;UBERON:0004535!4.46e-11!110;UBERON:0003104!9.78e-11!238;UBERON:0009142!9.78e-11!238;UBERON:0002049!2.33e-10!79;UBERON:0007798!2.33e-10!79;UBERON:0001048!2.37e-10!168;UBERON:0003102!3.23e-10!95;UBERON:0004111!7.24e-10!241;UBERON:0005911!1.39e-09!82;UBERON:0000481!1.52e-09!347;UBERON:0000161!3.68e-09!35;UBERON:0000055!7.12e-09!69;UBERON:0002365!1.92e-08!31;UBERON:0002330!1.92e-08!31;UBERON:0003929!5.94e-08!54;UBERON:0005256!7.73e-08!143;UBERON:0000119!1.25e-07!312;UBERON:0002100!1.28e-07!216;UBERON:0002530!1.77e-07!59;UBERON:0007100!1.91e-07!27;UBERON:0000483!2.23e-07!309;UBERON:0003103!3.42e-07!69;UBERON:0001004!4.26e-07!72;UBERON:0001041!4.52e-07!98;UBERON:0000466!4.82e-07!126;UBERON:0009569!5.98e-07!113;UBERON:0000166!6.78e-07!21;UBERON:0000165!7.08e-07!28;UBERON:0000930!7.08e-07!28;UBERON:0001444!7.75e-07!48;UBERON:0005631!8.70e-07!14;UBERON:0000158!8.70e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;3.92e-08;31!UBERON:0002330;3.92e-08;31!UBERON:0000490;1.93e-07;33!UBERON:0007100;2.33e-07;25!UBERON:0000077;3.57e-07;27!UBERON:0000165;7.18e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.11e-23,160;UBERON:0000925,7.11e-23,160;UBERON:0006595,7.11e-23,160;UBERON:0001007,1.24e-18,145;UBERON:0001555,1.24e-18,145;UBERON:0007026,1.24e-18,145;UBERON:0003914,5.95e-15,117;UBERON:0004921,6.29e-15,118;UBERON:0001048,1.74e-12,160;UBERON:0001009,5.22e-12,112;UBERON:0000490,9.56e-12,148;UBERON:0003102,1.55e-11,99;UBERON:0004872,2.06e-11,83;UBERON:0004535,6.17e-11,109;UBERON:0002049,3.71e-10,78;UBERON:0007798,3.71e-10,78;UBERON:0004111,1.37e-09,240;UBERON:0005911,1.53e-09,82;UBERON:0001041,2.69e-09,87;UBERON:0000161,6.92e-09,36;UBERON:0000055,1.12e-08,68;UBERON:0002365,1.93e-08,31;UBERON:0002330,1.93e-08,31;UBERON:0003929,6.20e-08,54;UBERON:0000119,1.42e-07,309;UBERON:0004923,1.89e-07,66;UBERON:0007100,1.90e-07,27;UBERON:0002530,1.92e-07,59;UBERON:0000483,2.54e-07,306;UBERON:0002100,2.56e-07,199;UBERON:0003103,2.70e-07,68;UBERON:0005256,4.45e-07,122;UBERON:0000033,5.09e-07,56;UBERON:0001004,6.96e-07,74;UBERON:0009569,8.55e-07,112;UBERON:0005631,8.67e-07,14;UBERON:0000158,8.67e-07,14 | |||
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| ||
|short_description=p1@PDLIM1 | |short_description=p1@PDLIM1 | ||
}} | }} |
Latest revision as of 02:56, 20 September 2015
Short description: | p1@PDLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDLIM1_5end |
Coexpression cluster: | C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast |
Association with transcript: | 0bp_to_ENST00000477757_5end |
EntrezGene: | PDLIM1 |
HGNC: | 2067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.21e-21 | 253 |
embryonic cell | 5.63e-17 | 250 |
squamous epithelial cell | 1.97e-13 | 63 |
endodermal cell | 1.81e-11 | 58 |
endo-epithelial cell | 3.31e-10 | 42 |
endothelial cell of vascular tree | 8.66e-08 | 24 |
lining cell | 3.51e-07 | 58 |
barrier cell | 3.51e-07 | 58 |
epithelial cell of alimentary canal | 4.68e-07 | 20 |
mesodermal cell | 9.26e-07 | 121 |
respiratory epithelial cell | 9.59e-07 | 13 |