FFCP PHASE1:Hg19::chr10:26986212..26986230,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:26986212..26986230,+
|short_description=p6@PDSS1
|description=CAGE_peak_6_at_PDSS1_5end
|association_with_transcript=-357bp_to_ENST00000376215_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23590 | |EntrezGene=23590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17759 | |HGNC=17759 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2R2 | |UniProt=Q5T2R2 | ||
|association_with_transcript=-357bp_to_ENST00000376215_5end | |||
|cluster_id=chr10:26986212..26986230,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_PDSS1_5end | |||
|id=chr10:26986212..26986230,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.27e-64!42;CL:0000860!2.49e-59!45;CL:0002194!2.25e-54!63;CL:0000576!2.25e-54!63;CL:0000040!2.25e-54!63;CL:0000559!2.25e-54!63;CL:0002009!2.42e-52!65;CL:0000557!1.33e-49!71;CL:0000839!9.19e-48!70;CL:0000766!2.58e-45!76;CL:0002087!7.57e-36!119;CL:0000763!3.02e-35!112;CL:0000049!3.02e-35!112;CL:0000738!2.62e-31!140;CL:0000037!1.17e-30!172;CL:0000566!1.17e-30!172;CL:0002031!1.68e-30!124;CL:0000988!4.05e-28!182;CL:0002032!5.69e-27!165;CL:0000837!5.69e-27!165;CL:0000134!1.13e-07!358;CL:0002320!2.86e-07!365;CL:0000219!8.89e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.85e-97;33!CL:0002057;2.85e-97;33!CL:0000473;1.39e-68;39!CL:0000234;1.39e-68;39!CL:0000576;1.75e-50;48!CL:0000766;5.15e-29;69!CL:0002087;8.37e-15;104!CL:0000763;3.43e-14;100!CL:0002032;5.43e-08;1!CL:0000557;5.43e-08;1!CL:0000738;1.33e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.86e-99,42;CL:0002057,3.86e-99,42;CL:0000473,3.16e-86,48;CL:0000234,3.16e-86,48;CL:0002194,7.85e-74,59;CL:0000576,7.85e-74,59;CL:0000040,7.85e-74,59;CL:0000559,7.85e-74,59;CL:0002009,2.60e-71,61;CL:0000557,7.67e-70,67;CL:0000839,1.14e-65,66;CL:0000766,6.44e-60,72;CL:0000763,6.44e-42,108;CL:0000049,6.44e-42,108;CL:0002087,4.42e-36,115;CL:0002031,2.09e-34,120;CL:0000738,7.26e-30,136;CL:0002032,9.98e-27,161;CL:0000837,9.98e-27,161;CL:0000037,1.98e-25,168;CL:0000988,6.51e-24,177;CL:0000134,1.27e-09,354;CL:0002320,2.42e-09,361;CL:0000219,2.78e-09,386;CL:0000034,1.40e-07,441;CL:0000048,3.86e-07,427;CL:0000723,5.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.02e-67;42!CL:0000049;1.08e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.84e-45!80;UBERON:0002390!3.76e-42!102;UBERON:0003061!3.76e-42!102;UBERON:0001474!5.86e-41!86;UBERON:0002193!3.62e-37!112;UBERON:0004765!4.93e-33!101;UBERON:0001434!4.93e-33!101;UBERON:0002405!2.75e-32!115;UBERON:0003081!2.30e-15!216;UBERON:0002204!3.21e-15!167;UBERON:0002384!1.02e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.60e-61,76;UBERON:0001474,1.97e-56,82;UBERON:0004765,4.38e-51,90;UBERON:0002405,2.58e-49,93;UBERON:0002390,1.34e-46,98;UBERON:0003061,1.34e-46,98;UBERON:0001434,1.37e-45,100;UBERON:0002193,6.44e-42,108;UBERON:0002204,1.31e-25,167;UBERON:0003081,2.82e-20,203;UBERON:0000926,2.07e-11,315;UBERON:0004120,2.07e-11,315;UBERON:0006603,2.07e-11,315;UBERON:0002384,6.21e-10,371 | |||
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| ||
|short_description=p6@PDSS1 | |||
}} | }} |
Latest revision as of 18:22, 17 September 2015
Short description: | p6@PDSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDSS1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -357bp_to_ENST00000376215_5end |
EntrezGene: | PDSS1 |
HGNC: | 17759 |
UniProt: | Q5T2R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.86e-99 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-99 | 42 |
defensive cell | 3.16e-86 | 48 |
phagocyte | 3.16e-86 | 48 |
monopoietic cell | 7.85e-74 | 59 |
monocyte | 7.85e-74 | 59 |
monoblast | 7.85e-74 | 59 |
promonocyte | 7.85e-74 | 59 |
macrophage dendritic cell progenitor | 2.60e-71 | 61 |
granulocyte monocyte progenitor cell | 7.67e-70 | 67 |
myeloid lineage restricted progenitor cell | 1.14e-65 | 66 |
myeloid leukocyte | 6.44e-60 | 72 |
myeloid cell | 6.44e-42 | 108 |
common myeloid progenitor | 6.44e-42 | 108 |
nongranular leukocyte | 4.42e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 2.09e-34 | 120 |
leukocyte | 7.26e-30 | 136 |
hematopoietic oligopotent progenitor cell | 9.98e-27 | 161 |
hematopoietic multipotent progenitor cell | 9.98e-27 | 161 |
hematopoietic stem cell | 1.98e-25 | 168 |
hematopoietic cell | 6.51e-24 | 177 |
mesenchymal cell | 1.27e-09 | 354 |
connective tissue cell | 2.42e-09 | 361 |
motile cell | 2.78e-09 | 386 |
stem cell | 1.40e-07 | 441 |
multi fate stem cell | 3.86e-07 | 427 |
somatic stem cell | 5.69e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.60e-61 | 76 |
bone element | 1.97e-56 | 82 |
skeletal element | 4.38e-51 | 90 |
immune system | 2.58e-49 | 93 |
hematopoietic system | 1.34e-46 | 98 |
blood island | 1.34e-46 | 98 |
skeletal system | 1.37e-45 | 100 |
hemolymphoid system | 6.44e-42 | 108 |
musculoskeletal system | 1.31e-25 | 167 |
lateral plate mesoderm | 2.82e-20 | 203 |
mesoderm | 2.07e-11 | 315 |
mesoderm-derived structure | 2.07e-11 | 315 |
presumptive mesoderm | 2.07e-11 | 315 |
connective tissue | 6.21e-10 | 371 |