FFCP PHASE1:Hg19::chr10:26986294..26986310,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:26986294..26986310,+
|short_description=p2@PDSS1
|description=CAGE_peak_2_at_PDSS1_5end
|association_with_transcript=-277bp_to_ENST00000376215_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23590 | |EntrezGene=23590 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17759 | |HGNC=17759 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2R2 | |UniProt=Q5T2R2 | ||
|association_with_transcript=-277bp_to_ENST00000376215_5end | |||
|cluster_id=chr10:26986294..26986310,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_PDSS1_5end | |||
|id=chr10:26986294..26986310,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.48e-65!42;CL:0000860!2.43e-60!45;CL:0002194!2.80e-53!63;CL:0000576!2.80e-53!63;CL:0000040!2.80e-53!63;CL:0000559!2.80e-53!63;CL:0002009!2.05e-51!65;CL:0000839!3.29e-47!70;CL:0000557!1.94e-46!71;CL:0000766!9.14e-46!76;CL:0002087!3.41e-32!119;CL:0002031!1.31e-28!124;CL:0000763!1.69e-28!112;CL:0000049!1.69e-28!112;CL:0000738!8.99e-28!140;CL:0000037!5.90e-21!172;CL:0000566!5.90e-21!172;CL:0002032!9.23e-21!165;CL:0000837!9.23e-21!165;CL:0000988!2.57e-19!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-105;33!CL:0002057;2.11e-105;33!CL:0000473;1.57e-71;39!CL:0000234;1.57e-71;39!CL:0000576;5.29e-55;48!CL:0000766;2.89e-31;69!CL:0002087;9.49e-17;104!CL:0000763;4.56e-13;100!CL:0000738;7.64e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.47e-106,42;CL:0002057,8.47e-106,42;CL:0000473,3.72e-92,48;CL:0000234,3.72e-92,48;CL:0002194,4.79e-73,59;CL:0000576,4.79e-73,59;CL:0000040,4.79e-73,59;CL:0000559,4.79e-73,59;CL:0002009,1.40e-70,61;CL:0000839,4.68e-65,66;CL:0000557,4.76e-64,67;CL:0000766,2.00e-59,72;CL:0000763,1.24e-38,108;CL:0000049,1.24e-38,108;CL:0002087,4.36e-36,115;CL:0002031,1.90e-34,120;CL:0000738,5.31e-30,136;CL:0002032,8.33e-25,161;CL:0000837,8.33e-25,161;CL:0000037,1.26e-23,168;CL:0000988,3.05e-22,177;CL:0000134,3.19e-09,354;CL:0002320,5.76e-09,361;CL:0000219,4.61e-08,386;CL:0000034,1.73e-07,441;CL:0000048,5.92e-07,427;CL:0000723,8.42e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-71;42!CL:0000049;6.12e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.33e-40!80;UBERON:0001474!5.25e-37!86;UBERON:0002390!1.72e-36!102;UBERON:0003061!1.72e-36!102;UBERON:0002193!1.75e-32!112;UBERON:0004765!2.36e-30!101;UBERON:0001434!2.36e-30!101;UBERON:0002405!2.19e-29!115;UBERON:0002204!1.93e-16!167;UBERON:0003081!8.66e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.71e-56,76;UBERON:0001474,7.60e-52,82;UBERON:0004765,5.59e-47,90;UBERON:0002405,2.29e-45,93;UBERON:0002390,6.76e-43,98;UBERON:0003061,6.76e-43,98;UBERON:0001434,5.62e-42,100;UBERON:0002193,1.24e-38,108;UBERON:0002204,8.69e-24,167;UBERON:0003081,6.25e-19,203;UBERON:0000926,7.49e-11,315;UBERON:0004120,7.49e-11,315;UBERON:0006603,7.49e-11,315;UBERON:0002384,1.29e-08,371 | |||
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| ||
|short_description=p2@PDSS1 | |||
}} | }} |
Latest revision as of 18:24, 17 September 2015
Short description: | p2@PDSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDSS1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -277bp_to_ENST00000376215_5end |
EntrezGene: | PDSS1 |
HGNC: | 17759 |
UniProt: | Q5T2R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.47e-106 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.47e-106 | 42 |
defensive cell | 3.72e-92 | 48 |
phagocyte | 3.72e-92 | 48 |
monopoietic cell | 4.79e-73 | 59 |
monocyte | 4.79e-73 | 59 |
monoblast | 4.79e-73 | 59 |
promonocyte | 4.79e-73 | 59 |
macrophage dendritic cell progenitor | 1.40e-70 | 61 |
myeloid lineage restricted progenitor cell | 4.68e-65 | 66 |
granulocyte monocyte progenitor cell | 4.76e-64 | 67 |
myeloid leukocyte | 2.00e-59 | 72 |
myeloid cell | 1.24e-38 | 108 |
common myeloid progenitor | 1.24e-38 | 108 |
nongranular leukocyte | 4.36e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 1.90e-34 | 120 |
leukocyte | 5.31e-30 | 136 |
hematopoietic oligopotent progenitor cell | 8.33e-25 | 161 |
hematopoietic multipotent progenitor cell | 8.33e-25 | 161 |
hematopoietic stem cell | 1.26e-23 | 168 |
hematopoietic cell | 3.05e-22 | 177 |
mesenchymal cell | 3.19e-09 | 354 |
connective tissue cell | 5.76e-09 | 361 |
motile cell | 4.61e-08 | 386 |
stem cell | 1.73e-07 | 441 |
multi fate stem cell | 5.92e-07 | 427 |
somatic stem cell | 8.42e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.71e-56 | 76 |
bone element | 7.60e-52 | 82 |
skeletal element | 5.59e-47 | 90 |
immune system | 2.29e-45 | 93 |
hematopoietic system | 6.76e-43 | 98 |
blood island | 6.76e-43 | 98 |
skeletal system | 5.62e-42 | 100 |
hemolymphoid system | 1.24e-38 | 108 |
musculoskeletal system | 8.69e-24 | 167 |
lateral plate mesoderm | 6.25e-19 | 203 |
mesoderm | 7.49e-11 | 315 |
mesoderm-derived structure | 7.49e-11 | 315 |
presumptive mesoderm | 7.49e-11 | 315 |
connective tissue | 1.29e-08 | 371 |