FFCP PHASE1:Hg19::chr16:71576199..71576201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:71576199..71576201,+ | |||
|coexpression_cluster_id=C1424 | |||
|description=CAGE_peak_at_chr16:71576199..71576201,+ | |description=CAGE_peak_at_chr16:71576199..71576201,+ | ||
|id=chr16:71576199..71576201,+ | |id=chr16:71576199..71576201,+ | ||
|ontology_enrichment_celltype=CL:0000839!9.81e-24!70;CL:0002194!1.60e-22!63;CL:0000576!1.60e-22!63;CL:0000040!1.60e-22!63;CL:0000559!1.60e-22!63;CL:0002057!5.08e-22!42;CL:0002009!8.01e-22!65;CL:0000557!1.95e-21!71;CL:0000860!2.09e-20!45;CL:0000766!3.85e-20!76;CL:0000763!7.36e-15!112;CL:0000049!7.36e-15!112 | |ontology_enrichment_celltype=CL:0000839!9.81e-24!70;CL:0002194!1.60e-22!63;CL:0000576!1.60e-22!63;CL:0000040!1.60e-22!63;CL:0000559!1.60e-22!63;CL:0002057!5.08e-22!42;CL:0002009!8.01e-22!65;CL:0000557!1.95e-21!71;CL:0000860!2.09e-20!45;CL:0000766!3.85e-20!76;CL:0000763!7.36e-15!112;CL:0000049!7.36e-15!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-42;33!CL:0002057;1.19e-42;33!CL:0000473;4.22e-37;39!CL:0000234;4.22e-37;39!CL:0000576;3.77e-30;48!CL:0000766;3.68e-19;69!CL:0000763;5.73e-09;100!CL:0002087;4.83e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.15e-54,48;CL:0000234,3.15e-54,48;CL:0000860,1.20e-50,42;CL:0002057,1.20e-50,42;CL:0002194,5.15e-49,59;CL:0000576,5.15e-49,59;CL:0000040,5.15e-49,59;CL:0000559,5.15e-49,59;CL:0002009,6.10e-47,61;CL:0000839,2.71e-44,66;CL:0000557,1.84e-41,67;CL:0000766,1.35e-37,72;CL:0000763,3.50e-25,108;CL:0000049,3.50e-25,108;CL:0002087,1.86e-20,115;CL:0002031,4.89e-19,120;CL:0000738,4.91e-17,136;CL:0002032,5.23e-13,161;CL:0000837,5.23e-13,161;CL:0000037,1.40e-12,168;CL:0000988,1.54e-12,177;CL:0002320,1.43e-07,361;CL:0000723,1.52e-07,433;CL:0000048,1.54e-07,427;CL:0000034,2.01e-07,441;CL:0000134,3.16e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-35;42!CL:0000049;3.37e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.86e-19!80;UBERON:0001474!3.08e-17!86;UBERON:0004765!3.87e-17!101;UBERON:0001434!3.87e-17!101;UBERON:0002204!2.26e-16!167;UBERON:0002405!1.10e-13!115;UBERON:0002390!1.26e-12!102;UBERON:0003061!1.26e-12!102;UBERON:0002193!2.40e-12!112;UBERON:0003081!1.82e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-07;9!UBERON:0001557;1.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-38,76;UBERON:0002405,2.48e-35,93;UBERON:0004765,6.36e-35,90;UBERON:0001474,1.18e-34,82;UBERON:0001434,2.85e-31,100;UBERON:0002193,1.61e-29,108;UBERON:0002390,6.50e-28,98;UBERON:0003061,6.50e-28,98;UBERON:0002204,2.81e-19,167;UBERON:0003081,2.52e-14,203;UBERON:0000926,7.34e-10,315;UBERON:0004120,7.34e-10,315;UBERON:0006603,7.34e-10,315;UBERON:0001737,4.10e-08,9;UBERON:0002384,6.59e-07,371 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0.218441372130172,0.263766978228454,0.495065411840187,1.32558950291166,13.4465029290355,15.0673632005994,16.0668219885222,0.487932798790507,0,0,1.56727360739044,0,0,0,0,0,0,0,0,0.77408061658038,0.919421224478927,0.90361775633475,0,0,0,0,0,1.60435557976113,0.651032612147555,1.56740831967947,1.29557466407592,0,4.07115068582781,1.13362783106643,3.15359279544161,5.34586784883075,6.16751832032739,3.40677007984614,4.60307827715441,3.07392847834921,3.78371567821736,3.44745680736619,3.87290810150296,0,4.89430082810772,3.27487380069415,4.71919317334678,7.34601341690166,3.85114832491312,8.31138263538754,3.29851300186716,1.99463657621632,2.13112375266347,8.9964863974861,4.53908179752912,3.73693349397345,3.76872997885115,3.65038042894141,2.82345498116652,4.23779651843358,1.84138817993782,4.74693581161327,1.26753171787165,3.4016687994407,1.46761051855863,1.34794357375794,4.6554836780867,0.803627933485401,0,5.37075028437543,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.557052284425868,1.47302953737419,1.32920336750173,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0.802622484269139,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.639312809217652,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0.0945348171640679,0.443458794925128,0,0,0,0,0.324547393654683,1.0447784237956,0.398873881556595,0.476981248610684,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0.22452937262617,0,0,0.949265659568129,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.605429710579726,0,0.468642863667593,0,0,0.149448680551801,0,0.323745888736263,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.989067717114227,0,1.43723628363248,0,0.125118519871964,0,0,0.30648779579902,0.600952235626387,0,0,0.213557388818567,0.211931901159562,0,0,0,0.558350568994769,0,0.0974370051611986,0,0,0.969876340912871,0,0.403008392910561,0.339121184620975,0.966304265816484,0.272746120590835,0,0,0,0.232387885739037,0.10366105501537,1.00928340350251,0.36497735907583,1.56449532329816,0,0,0,0.721879481669586,1.77460200059766,1.51726221070292,1.92808823906786,2.09558548191549,1.08939722046203,0.71181185733329,1.75280700608214,1.96221465125346,0.769494313892781,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.857839051492628,0.548751427043128,1.1240175325762,0.100528972411631,0,0.651616610620649,0,0,0.231860809950154,0.587043471179108,1.29929802984966,7.40776820122577,5.32711626256875,0,0,1.23108503043699,0.702012795417713,0.743155811443641,0,1.51183915378974,1.55952606966625,0.179117045405697,0.290633938513962,0,0,0.792435906119034,0.829312462163088,0.432359860250884,0.75745460055828,0.317489471460845,0.763976851116555,0,0,0.205654985406647,0.901029173531752,0.571652865261156,0,0,0,0.258543431515556,0,1.690605505112,0.26593811658487,0,0,0,0.532844358032199,1.14382394926518,0,0,0,0.355391948742546,0.791951872933429,0.602878754119172,0,0.299918973546171,7.29742683847143,17.5789982001244,8.43335757932127,0,0,0,0.144781306667579,0.61642896765115,0.895304816199478,0.112085143993527,0,0,0,0,1.30139853857622,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0.542530047399471,0.623912584592421,1.24900292158013,1.41932173530541,0.819989904948992,1.20378439891088,0,1.03473071292505,0,0,0,1.37060810223918,0.686286847621712,0,1.2942852049117,0.426910231213777,0,0,0,0,0.153461973288062,0.561320188866147,0.640695746278505,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.232420756919918,0,0.40101294060657,0.276242966807689,0.229628896329213,0.364182336013434,0.262248829918848,0,0.231046011313244,0,0,0.105551628892876,0,0,0,1.54227252690289,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0.877039506583738,1.3071772551245,0.256450125116389,0.656029291399411,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0.307007349452259,0.275673144969061,0.107420244868274,0.870100163485371,0,0.0890320356467374,0.330569830721956,0.192190067365106,0,0.4046311234222,2.32422774648643,0.31481234683064,0,0.924100740528266,1.59691809095107,0,0.37064843820784,0.858749320451947,0.372158369359667,0,0,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0.606547444719948,0,0,0,0.731140468893853,4.22600587027022,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0.876901770507525,0,1.9676842561399,0,0,0.845086807596724,0.430234056612155,0.589494246078727,0,0,0.422215270595328,1.31717957183961,0.379473173765715,1.04980416073495,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.886860307073351,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0.106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| ||
|short_description=p@chr16:71576199..71576201,+ | |short_description=p@chr16:71576199..71576201,+ | ||
}} | }} |
Latest revision as of 12:04, 25 July 2015
Short description: | p@chr16:71576199..71576201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:71576199..71576201, + |
Coexpression cluster: | C1424_Monocytederived_CD14_mesenchymal_serous_Aortic_Lymphatic_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.15e-54 | 48 |
phagocyte | 3.15e-54 | 48 |
classical monocyte | 1.20e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-50 | 42 |
monopoietic cell | 5.15e-49 | 59 |
monocyte | 5.15e-49 | 59 |
monoblast | 5.15e-49 | 59 |
promonocyte | 5.15e-49 | 59 |
macrophage dendritic cell progenitor | 6.10e-47 | 61 |
myeloid lineage restricted progenitor cell | 2.71e-44 | 66 |
granulocyte monocyte progenitor cell | 1.84e-41 | 67 |
myeloid leukocyte | 1.35e-37 | 72 |
myeloid cell | 3.50e-25 | 108 |
common myeloid progenitor | 3.50e-25 | 108 |
nongranular leukocyte | 1.86e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 4.89e-19 | 120 |
leukocyte | 4.91e-17 | 136 |
hematopoietic oligopotent progenitor cell | 5.23e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.23e-13 | 161 |
hematopoietic stem cell | 1.40e-12 | 168 |
hematopoietic cell | 1.54e-12 | 177 |
connective tissue cell | 1.43e-07 | 361 |
somatic stem cell | 1.52e-07 | 433 |
multi fate stem cell | 1.54e-07 | 427 |
stem cell | 2.01e-07 | 441 |
mesenchymal cell | 3.16e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-38 | 76 |
immune system | 2.48e-35 | 93 |
skeletal element | 6.36e-35 | 90 |
bone element | 1.18e-34 | 82 |
skeletal system | 2.85e-31 | 100 |
hemolymphoid system | 1.61e-29 | 108 |
hematopoietic system | 6.50e-28 | 98 |
blood island | 6.50e-28 | 98 |
musculoskeletal system | 2.81e-19 | 167 |
lateral plate mesoderm | 2.52e-14 | 203 |
mesoderm | 7.34e-10 | 315 |
mesoderm-derived structure | 7.34e-10 | 315 |
presumptive mesoderm | 7.34e-10 | 315 |
larynx | 4.10e-08 | 9 |
connective tissue | 6.59e-07 | 371 |