FFCP PHASE1:Hg19::chr10:61666242..61666265,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:61666242..61666265,-
|short_description=p3@CCDC6
|description=CAGE_peak_3_at_CCDC6_5end
|association_with_transcript=148bp_to_ENST00000263102,NM_005436_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8030 | |EntrezGene=8030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18782 | |HGNC=18782 | ||
|UniProt=Q05CP8, | |TSSclassifier=strong | ||
|UniProt=Q05CP8,Q16204 | |||
|association_with_transcript=148bp_to_ENST00000263102,NM_005436_5end | |||
|cluster_id=chr10:61666242..61666265,- | |||
|description=CAGE_peak_3_at_CCDC6_5end | |||
|id=chr10:61666242..61666265,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!6.50e-12!612;UBERON:0002050!7.07e-12!605;UBERON:0005423!7.07e-12!605;UBERON:0000923!1.67e-11!604;UBERON:0005291!1.67e-11!604;UBERON:0006598!1.67e-11!604;UBERON:0002532!1.67e-11!604;UBERON:0004121!9.36e-11!169;UBERON:0000475!4.81e-10!365;UBERON:0000924!6.53e-10!173;UBERON:0006601!6.53e-10!173;UBERON:0000468!2.20e-09!659;UBERON:0000033!9.29e-09!123;UBERON:0000481!1.92e-08!347;UBERON:0000467!3.05e-08!625;UBERON:0000153!3.78e-08!129;UBERON:0007811!3.78e-08!129;UBERON:0000480!5.53e-08!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.69e-10,564;UBERON:0000922,3.61e-10,592;UBERON:0005423,5.22e-10,581;UBERON:0000923,8.83e-10,560;UBERON:0010316,8.83e-10,560;UBERON:0005291,8.83e-10,560;UBERON:0006598,8.83e-10,560;UBERON:0010317,8.83e-10,560;UBERON:0002532,8.83e-10,560;UBERON:0004121,1.43e-09,171;UBERON:0000924,1.43e-09,171;UBERON:0006601,1.43e-09,171;UBERON:0011216,2.01e-08,223 | |||
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| ||
|short_description=p3@CCDC6 | |||
}} | }} |
Latest revision as of 16:03, 18 September 2015
Short description: | p3@CCDC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 148bp_to_ENST00000263102, NM_005436_5end |
EntrezGene: | CCDC6 |
HGNC: | 18782 |
UniProt: | Q05CP8Q16204 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic structure | 1.69e-10 | 564 |
embryo | 3.61e-10 | 592 |
developing anatomical structure | 5.22e-10 | 581 |
germ layer | 8.83e-10 | 560 |
germ layer / neural crest | 8.83e-10 | 560 |
embryonic tissue | 8.83e-10 | 560 |
presumptive structure | 8.83e-10 | 560 |
germ layer / neural crest derived structure | 8.83e-10 | 560 |
epiblast (generic) | 8.83e-10 | 560 |
ectoderm-derived structure | 1.43e-09 | 171 |
ectoderm | 1.43e-09 | 171 |
presumptive ectoderm | 1.43e-09 | 171 |
organ system subdivision | 2.01e-08 | 223 |