FFCP PHASE1:Hg19::chr12:113646018..113646029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115811 | |EntrezGene=115811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25168 | |HGNC=25168 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_CU680526,HQ447179_5end | |association_with_transcript=-47bp_to_CU680526,HQ447179_5end | ||
|cluster_id=chr12:113646018..113646029,- | |||
|description=CAGE_peak_3_at_IQCD_5end | |description=CAGE_peak_3_at_IQCD_5end | ||
|id=chr12:113646018..113646029,- | |id=chr12:113646018..113646029,- | ||
|ontology_enrichment_celltype=CL:0000738!1.69e-63!140;CL:0000037!1.80e-63!172;CL:0000566!1.80e-63!172;CL:0000988!1.61e-58!182;CL:0002087!1.59e-57!119;CL:0002031!6.71e-56!124;CL:0002032!1.18e-54!165;CL:0000837!1.18e-54!165;CL:0000839!1.13e-34!70;CL:0000766!1.17e-34!76;CL:0000557!3.16e-32!71;CL:0000763!2.04e-30!112;CL:0000049!2.04e-30!112;CL:0002194!3.33e-30!63;CL:0000576!3.33e-30!63;CL:0000040!3.33e-30!63;CL:0000559!3.33e-30!63;CL:0002009!6.69e-29!65;CL:0002057!9.47e-29!42;CL:0000860!3.57e-26!45;CL:0000542!9.54e-22!53;CL:0000051!9.54e-22!53;CL:0000838!1.00e-20!52;CL:0000134!9.33e-20!358;CL:0002320!7.01e-19!365;CL:0000945!2.76e-16!24;CL:0000826!2.76e-16!24;CL:0000219!8.15e-16!390;CL:0000048!3.30e-12!430;CL:0000723!1.05e-11!436;CL:0000034!1.10e-11!444;CL:0002393!1.02e-10!9;CL:0002397!1.02e-10!9 | |ontology_enrichment_celltype=CL:0000738!1.69e-63!140;CL:0000037!1.80e-63!172;CL:0000566!1.80e-63!172;CL:0000988!1.61e-58!182;CL:0002087!1.59e-57!119;CL:0002031!6.71e-56!124;CL:0002032!1.18e-54!165;CL:0000837!1.18e-54!165;CL:0000839!1.13e-34!70;CL:0000766!1.17e-34!76;CL:0000557!3.16e-32!71;CL:0000763!2.04e-30!112;CL:0000049!2.04e-30!112;CL:0002194!3.33e-30!63;CL:0000576!3.33e-30!63;CL:0000040!3.33e-30!63;CL:0000559!3.33e-30!63;CL:0002009!6.69e-29!65;CL:0002057!9.47e-29!42;CL:0000860!3.57e-26!45;CL:0000542!9.54e-22!53;CL:0000051!9.54e-22!53;CL:0000838!1.00e-20!52;CL:0000134!9.33e-20!358;CL:0002320!7.01e-19!365;CL:0000945!2.76e-16!24;CL:0000826!2.76e-16!24;CL:0000219!8.15e-16!390;CL:0000048!3.30e-12!430;CL:0000723!1.05e-11!436;CL:0000034!1.10e-11!444;CL:0002393!1.02e-10!9;CL:0002397!1.02e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.25e-16;13!CL:0000473;6.95e-12;39!CL:0000234;6.95e-12;39!CL:0000945;1.70e-11;24!CL:0000542;2.64e-11;53!CL:0000860;7.31e-10;33!CL:0002057;7.31e-10;33!CL:0000767;2.92e-09;3!CL:0000623;2.92e-09;3!CL:0002087;9.82e-09;104!CL:0002032;2.49e-07;1!CL:0000785;2.49e-07;1!CL:0000557;2.49e-07;1!CL:0000819;2.49e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.27e-27,136;CL:0000037,5.82e-27,168;CL:0002087,2.27e-25,115;CL:0000988,2.53e-25,177;CL:0002031,4.07e-24,120;CL:0002032,4.32e-24,161;CL:0000837,4.32e-24,161;CL:0000236,5.77e-15,14;CL:0000838,2.40e-14,52;CL:0000542,4.94e-14,53;CL:0000051,4.94e-14,53;CL:0000766,1.31e-11,72;CL:0000945,1.56e-11,24;CL:0000826,1.56e-11,24;CL:0000473,4.42e-11,48;CL:0000234,4.42e-11,48;CL:0000763,5.16e-11,108;CL:0000049,5.16e-11,108;CL:0000839,6.87e-11,66;CL:0000557,1.21e-10,67;CL:0002194,2.41e-10,59;CL:0000576,2.41e-10,59;CL:0000040,2.41e-10,59;CL:0000559,2.41e-10,59;CL:0002009,6.03e-10,61;CL:0000134,6.65e-10,354;CL:0002320,1.33e-09,361;CL:0000767,4.15e-09,3;CL:0000623,4.68e-09,3;CL:0000825,4.68e-09,3;CL:0000219,1.55e-08,386;CL:0000860,3.35e-08,42;CL:0002057,3.35e-08,42;CL:0000034,1.22e-07,441;CL:0000048,3.14e-07,427;CL:0000819,4.09e-07,1;CL:0000723,4.76e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;2.64e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.49e-07;1!DOID:8675;2.49e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.09e-07,1;DOID:8675,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.58e-30!80;UBERON:0002390!1.99e-27!102;UBERON:0003061!1.99e-27!102;UBERON:0001474!3.15e-27!86;UBERON:0002193!9.42e-25!112;UBERON:0004765!2.78e-22!101;UBERON:0001434!2.78e-22!101;UBERON:0002405!7.85e-20!115;UBERON:0002384!1.09e-17!375;UBERON:0002204!1.73e-08!167;UBERON:0003081!3.10e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.45e-09,371;UBERON:0002371,3.89e-09,76;UBERON:0001474,2.58e-08,82;UBERON:0002390,6.76e-08,98;UBERON:0003061,6.76e-08,98;UBERON:0004765,2.17e-07,90;UBERON:0002405,4.39e-07,93;UBERON:0002193,6.00e-07,108 | |||
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| ||
|short_description=p3@IQCD | |short_description=p3@IQCD | ||
}} | }} |
Latest revision as of 12:24, 16 September 2015
Short description: | p3@IQCD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IQCD_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_CU680526, HQ447179_5end |
EntrezGene: | IQCD |
HGNC: | 25168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.45e-09 | 371 |
bone marrow | 3.89e-09 | 76 |
bone element | 2.58e-08 | 82 |
hematopoietic system | 6.76e-08 | 98 |
blood island | 6.76e-08 | 98 |
skeletal element | 2.17e-07 | 90 |
immune system | 4.39e-07 | 93 |
hemolymphoid system | 6.00e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.09e-07 | 1 |
lymphosarcoma | 4.09e-07 | 1 |