FFCP PHASE1:Hg19::chr12:2404315..2404327,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:2404315..2404327,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:2404315..2404327,+ | |description=CAGE_peak_at_chr12:2404315..2404327,+ | ||
|id=chr12:2404315..2404327,+ | |id=chr12:2404315..2404327,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.98e-105!42;CL:0000860!8.75e-98!45;CL:0002194!5.21e-66!63;CL:0000576!5.21e-66!63;CL:0000040!5.21e-66!63;CL:0000559!5.21e-66!63;CL:0002009!9.94e-64!65;CL:0000766!7.77e-60!76;CL:0000839!1.37e-58!70;CL:0000557!1.20e-57!71;CL:0000763!4.17e-47!112;CL:0000049!4.17e-47!112;CL:0002087!4.88e-39!119;CL:0000738!1.35e-35!140;CL:0000037!8.97e-34!172;CL:0000566!8.97e-34!172;CL:0002031!4.37e-33!124;CL:0002032!3.79e-32!165;CL:0000837!3.79e-32!165;CL:0000988!2.42e-31!182;CL:0000134!6.00e-15!358;CL:0002320!1.91e-14!365;CL:0000219!1.13e-12!390;CL:0000048!2.76e-11!430;CL:0000723!5.66e-11!436;CL:0000034!1.44e-10!444 | |ontology_enrichment_celltype=CL:0002057!1.98e-105!42;CL:0000860!8.75e-98!45;CL:0002194!5.21e-66!63;CL:0000576!5.21e-66!63;CL:0000040!5.21e-66!63;CL:0000559!5.21e-66!63;CL:0002009!9.94e-64!65;CL:0000766!7.77e-60!76;CL:0000839!1.37e-58!70;CL:0000557!1.20e-57!71;CL:0000763!4.17e-47!112;CL:0000049!4.17e-47!112;CL:0002087!4.88e-39!119;CL:0000738!1.35e-35!140;CL:0000037!8.97e-34!172;CL:0000566!8.97e-34!172;CL:0002031!4.37e-33!124;CL:0002032!3.79e-32!165;CL:0000837!3.79e-32!165;CL:0000988!2.42e-31!182;CL:0000134!6.00e-15!358;CL:0002320!1.91e-14!365;CL:0000219!1.13e-12!390;CL:0000048!2.76e-11!430;CL:0000723!5.66e-11!436;CL:0000034!1.44e-10!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-136;33!CL:0002057;1.97e-136;33!CL:0000473;7.51e-94;39!CL:0000234;7.51e-94;39!CL:0000576;5.47e-73;48!CL:0000766;6.70e-41;69!CL:0002087;1.83e-18;104!CL:0000763;2.74e-18;100!CL:0000738;1.03e-11;136!CL:0000346;1.13e-08;3!CL:1000428;1.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.04e-134,42;CL:0002057,2.04e-134,42;CL:0000473,5.67e-117,48;CL:0000234,5.67e-117,48;CL:0002194,1.52e-92,59;CL:0000576,1.52e-92,59;CL:0000040,1.52e-92,59;CL:0000559,1.52e-92,59;CL:0002009,2.17e-89,61;CL:0000839,2.49e-82,66;CL:0000557,4.83e-81,67;CL:0000766,3.92e-75,72;CL:0000763,1.44e-48,108;CL:0000049,1.44e-48,108;CL:0002087,2.60e-45,115;CL:0002031,3.23e-43,120;CL:0000738,1.54e-37,136;CL:0002032,6.62e-31,161;CL:0000837,6.62e-31,161;CL:0000037,2.13e-29,168;CL:0000988,1.24e-27,177;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0000219,1.66e-11,386;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441;CL:0000346,1.13e-08,3;CL:1000428,1.13e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-100;42!CL:0000049;1.17e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.81e-53!80;UBERON:0001474!7.85e-49!86;UBERON:0002390!1.45e-44!102;UBERON:0003061!1.45e-44!102;UBERON:0004765!1.29e-42!101;UBERON:0001434!1.29e-42!101;UBERON:0002193!9.21e-40!112;UBERON:0002405!2.80e-34!115;UBERON:0002204!4.81e-25!167;UBERON:0003081!3.35e-17!216;UBERON:0002384!9.27e-14!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.13e-08;3!UBERON:0001992;1.13e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.88e-71,76;UBERON:0001474,1.91e-65,82;UBERON:0004765,3.15e-59,90;UBERON:0002405,3.62e-57,93;UBERON:0002390,5.18e-54,98;UBERON:0003061,5.18e-54,98;UBERON:0001434,7.76e-53,100;UBERON:0002193,1.44e-48,108;UBERON:0002204,1.32e-29,167;UBERON:0003081,2.08e-23,203;UBERON:0000926,1.68e-15,315;UBERON:0004120,1.68e-15,315;UBERON:0006603,1.68e-15,315;UBERON:0002384,2.68e-12,371;UBERON:0000412,1.13e-08,3;UBERON:0001992,1.13e-08,3 | |||
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|short_description=p@chr12:2404315..2404327,+ | |short_description=p@chr12:2404315..2404327,+ | ||
}} | }} |
Latest revision as of 07:37, 24 July 2015
Short description: | p@chr12:2404315..2404327, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:2404315..2404327, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.04e-134 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-134 | 42 |
defensive cell | 5.67e-117 | 48 |
phagocyte | 5.67e-117 | 48 |
monopoietic cell | 1.52e-92 | 59 |
monocyte | 1.52e-92 | 59 |
monoblast | 1.52e-92 | 59 |
promonocyte | 1.52e-92 | 59 |
macrophage dendritic cell progenitor | 2.17e-89 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-82 | 66 |
granulocyte monocyte progenitor cell | 4.83e-81 | 67 |
myeloid leukocyte | 3.92e-75 | 72 |
myeloid cell | 1.44e-48 | 108 |
common myeloid progenitor | 1.44e-48 | 108 |
nongranular leukocyte | 2.60e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 3.23e-43 | 120 |
leukocyte | 1.54e-37 | 136 |
hematopoietic oligopotent progenitor cell | 6.62e-31 | 161 |
hematopoietic multipotent progenitor cell | 6.62e-31 | 161 |
hematopoietic stem cell | 2.13e-29 | 168 |
hematopoietic cell | 1.24e-27 | 177 |
mesenchymal cell | 3.64e-13 | 354 |
connective tissue cell | 8.48e-13 | 361 |
motile cell | 1.66e-11 | 386 |
multi fate stem cell | 6.38e-10 | 427 |
somatic stem cell | 1.06e-09 | 433 |
stem cell | 2.02e-09 | 441 |
hair follicle dermal papilla cell | 1.13e-08 | 3 |
stem cell of epidermis | 1.13e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.88e-71 | 76 |
bone element | 1.91e-65 | 82 |
skeletal element | 3.15e-59 | 90 |
immune system | 3.62e-57 | 93 |
hematopoietic system | 5.18e-54 | 98 |
blood island | 5.18e-54 | 98 |
skeletal system | 7.76e-53 | 100 |
hemolymphoid system | 1.44e-48 | 108 |
musculoskeletal system | 1.32e-29 | 167 |
lateral plate mesoderm | 2.08e-23 | 203 |
mesoderm | 1.68e-15 | 315 |
mesoderm-derived structure | 1.68e-15 | 315 |
presumptive mesoderm | 1.68e-15 | 315 |
connective tissue | 2.68e-12 | 371 |
dermal papilla | 1.13e-08 | 3 |
papillary layer of dermis | 1.13e-08 | 3 |