FFCP PHASE1:Hg19::chr17:61523535..61523559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1534 | |EntrezGene=1534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2571 | |HGNC=2571 | ||
|TSSclassifier=strong | |||
|UniProt=P49447,B3KTA1 | |UniProt=P49447,B3KTA1 | ||
|association_with_transcript=0bp_to_ENST00000392976,NM_001017916,uc002jas.2,uc010ddt.2_5end | |association_with_transcript=0bp_to_ENST00000392976,NM_001017916,uc002jas.2,uc010ddt.2_5end | ||
|cluster_id=chr17:61523535..61523559,- | |||
|description=CAGE_peak_4_at_CYB561_5end | |description=CAGE_peak_4_at_CYB561_5end | ||
|id=chr17:61523535..61523559,- | |id=chr17:61523535..61523559,- | ||
|ontology_enrichment_celltype=CL:0000066!2.05e-11!254;CL:0002076!1.38e-10!43;CL:0002251!7.03e-07!21;CL:0000223!9.91e-07!59 | |ontology_enrichment_celltype=CL:0000066!2.05e-11!254;CL:0002076!1.38e-10!43;CL:0002251!7.03e-07!21;CL:0000223!9.91e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.20e-07;3!CL:0000349;1.45e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.11e-11,253;CL:0002076,5.71e-08,42;CL:0000349,1.16e-07,19;CL:0002577,1.27e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.26e-14!106;DOID:299!1.33e-11!25;DOID:1749!2.96e-10!14;DOID:0050687!2.03e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:299;2.77e-15;25!DOID:1749;5.06e-15;14!DOID:5093;7.52e-10;4!DOID:1612;7.52e-10;4!DOID:305;6.27e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.92e-19,106;DOID:299,2.55e-15,25;DOID:1749,3.61e-15,14;DOID:0050687,5.02e-12,143;DOID:5093,7.30e-10,4;DOID:1612,7.30e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.74e-09!169;UBERON:0000925!3.74e-09!169;UBERON:0006595!3.74e-09!169;UBERON:0007023!1.63e-08!115;UBERON:0005631!1.76e-07!14;UBERON:0000158!1.76e-07!14;UBERON:0000344!4.34e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;2.04e-11;6!UBERON:0001987;4.93e-09;4!UBERON:0000478;2.12e-08;24!UBERON:0003343;4.12e-08;4!UBERON:0004785;4.12e-08;4!UBERON:0006947;9.70e-08;3!UBERON:0004054;9.70e-08;3!UBERON:0000305;1.17e-07;7!UBERON:0000058;2.34e-07;10!UBERON:0005178;3.85e-07;34!UBERON:0002224;3.85e-07;34!UBERON:0005631;4.87e-07;10!UBERON:0000158;4.87e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.43e-13,14;UBERON:0000158,1.43e-13,14;UBERON:0004119,8.17e-12,160;UBERON:0000925,8.17e-12,160;UBERON:0006595,8.17e-12,160;UBERON:0004175,1.29e-09,25;UBERON:0001987,4.15e-09,4;UBERON:0004340,4.15e-09,4;UBERON:0000974,1.19e-08,10;UBERON:0000478,1.55e-08,24;UBERON:0001007,1.77e-08,145;UBERON:0001555,1.77e-08,145;UBERON:0007026,1.77e-08,145;UBERON:0003343,3.82e-08,4;UBERON:0004785,3.82e-08,4;UBERON:0000915,7.33e-08,52;UBERON:0005178,8.77e-08,34;UBERON:0002224,8.77e-08,34;UBERON:0006947,1.00e-07,3;UBERON:0004054,1.00e-07,3;UBERON:0000305,1.05e-07,7;UBERON:0001004,1.07e-07,74;UBERON:0003124,1.77e-07,7;UBERON:0005181,1.81e-07,35;UBERON:0005795,2.06e-07,22;UBERON:0004921,5.28e-07,118;UBERON:0000065,6.70e-07,54;UBERON:0005383,7.76e-07,3;UBERON:0005382,7.76e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,1.47440361900905,6.28021051175185,2.40285509343189,3.9565046734268,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,1.70763890732835,2.34894875748376,1.91136614062614,0,0,0,0.983548850569165,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.113309342697566,1.91610246800961,0.34362744548263,2.02415753615602,1.27426165729639,0.651083453856419,0,0.451725357233318,1.02389288923535,0,0.236777252044017,0.821127996921047,0.604820229674197,1.33720097891754,0.434473211648397,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.392937226493138,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0.225222960966644,0,0,0.366403487860815,0,0,1.74437620857014,0,0.25326102332916,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0.57978255948989,0.545492241181669,0,0,0.265059536642971,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.439001141634502,1.1240175325762,0.201057944823262,0.277765335475589,0,0,0,0,0.117408694235822,0.144366447761074,0,0,18.1747011530633,17.1697232418975,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.646882724578552,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0,0,0,0,0,0,0,0,0.195801157462741,0,0.620304078368662,0.215714200818617,0.640365346820666,3.03127571446259,6.65741758041988,5.74541557326393,0,0.153461973288062,0.841980283299221,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.846016147141356,0.802025881213139,0.368323955743585,0,0,0,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0.495854746082934,0,1.40373983744043,0.809262246844399,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0.744316738719335,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.842516912477962,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.288666338176536,2.01090682660736,1.08890984861323,0.847294206991012,0.43050537267123,1.68471475667626,2.66058092122005,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,2.94048259177238,0,0,0,0,0.199579371432817,0,0.635020748171649,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0.36408156524854,0,0,2.14870036263921,5.04839957415486,3.99308912729002,0,0.140669416410513,0,0.329607748453519,0.844501632511974,0,0.552567831062295,1.76352923497993,0,0.123084805461069,0,1.16828856491525,0.537063524026827,0,0.295930216910801,0,0,0,0.0927680981618513,0,9.89625492123886,3.84823999983261,0.724999575434793,5.34829206941848,3.30529745380596,1.89110145414349,0.344743373241465,0,0,3.54296554325536,1.92954301800653,0,0,0,0.438770794307945,0,1.11538995422883,0.923403102045565,0,0,0.987334088507493,0.108647371922008,1.91400695839152,0.366390373607449,0.533034776018635,0,0.31396051279005,0,0,0,0,0.948768663620925,0,0.210998064528027,1.79556088975062,1.27217764290547,0.216388639742091,0,0.973033209536731,0,0.889563386041866,0.370691816839509,0.939797545549098,0,0,1.1713222286267,0,2.34797542718508,0,9.86461007123476,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,1.99226682220855,0,5.20679215005393,2.25382514053069,0.783532859223623,4.19344003780872,0,0,0,0,1.45483524732629,0,0.90392296312213,0,0,0.316553979779393,1.95551382734803,1.04206466326994,1.49417096317547,0.39961921916426,3.16998917739033,0,0.343189995723929,0.14405479798815,0,0.942776138467182,0.135904206073614,0.209205692624666,0.101998217636322,0,1.80126086612937,0,0,0,0.788662062837943,0,0,0,2.39614800598789,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,1.5476039091159,0.121499113316049,5.36695500158826,1.10327990218877,0.944182586429966,0,0.537862017998534,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0.566560457600628,0,0,0.775697738169303,0.13223260174269,0,3.52407511158336,0.640724475406168,0.78602152549833,2.07119527673598,0,0,0.365377795142688,2.55336503108073,0,0,0,0,3.29813602125492,0.886068179966986,0.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| ||
|short_description=p4@CYB561 | |short_description=p4@CYB561 | ||
}} | }} |
Latest revision as of 17:18, 16 September 2015
Short description: | p4@CYB561 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYB561_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392976, NM_001017916, uc002jas.2, uc010ddt.2_5end |
EntrezGene: | CYB561 |
HGNC: | 2571 |
UniProt: | P49447B3KTA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.11e-11 | 253 |
endo-epithelial cell | 5.71e-08 | 42 |
extraembryonic cell | 1.16e-07 | 19 |
placental epithelial cell | 1.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.43e-13 | 14 |
membranous layer | 1.43e-13 | 14 |
endoderm-derived structure | 8.17e-12 | 160 |
endoderm | 8.17e-12 | 160 |
presumptive endoderm | 8.17e-12 | 160 |
internal genitalia | 1.29e-09 | 25 |
placenta | 4.15e-09 | 4 |
allantois | 4.15e-09 | 4 |
neck | 1.19e-08 | 10 |
extraembryonic structure | 1.55e-08 | 24 |
digestive system | 1.77e-08 | 145 |
digestive tract | 1.77e-08 | 145 |
primitive gut | 1.77e-08 | 145 |
mucosa of oral region | 3.82e-08 | 4 |
respiratory system mucosa | 3.82e-08 | 4 |
thoracic segment of trunk | 7.33e-08 | 52 |
thoracic cavity element | 8.77e-08 | 34 |
thoracic cavity | 8.77e-08 | 34 |
male genital duct | 1.00e-07 | 3 |
internal male genitalia | 1.00e-07 | 3 |
amnion | 1.05e-07 | 7 |
respiratory system | 1.07e-07 | 74 |
chorion | 1.77e-07 | 7 |
thoracic segment organ | 1.81e-07 | 35 |
embryonic uterus | 2.06e-07 | 22 |
subdivision of digestive tract | 5.28e-07 | 118 |
respiratory tract | 6.70e-07 | 54 |
caudate-putamen | 7.76e-07 | 3 |
dorsal striatum | 7.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.92e-19 | 106 |
adenocarcinoma | 2.55e-15 | 25 |
squamous cell carcinoma | 3.61e-15 | 14 |
cell type cancer | 5.02e-12 | 143 |
thoracic cancer | 7.30e-10 | 4 |
breast cancer | 7.30e-10 | 4 |