FFCP PHASE1:Hg19::chr13:36050940..36050952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26960 | |EntrezGene=26960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7648 | |HGNC=7648 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-13bp_to_uc010teg.1_5end | |association_with_transcript=-13bp_to_uc010teg.1_5end | ||
|cluster_id=chr13:36050940..36050952,+ | |||
|coexpression_cluster_id=C699 | |||
|description=CAGE_peak_2_at_NBEA_5end | |description=CAGE_peak_2_at_NBEA_5end | ||
|id=chr13:36050940..36050952,+ | |id=chr13:36050940..36050952,+ | ||
|ontology_enrichment_celltype=CL:0000075!3.37e-15!27;CL:0000710!5.61e-13!20;CL:0000147!1.36e-09!14;CL:0000064!3.09e-09!3;CL:0005012!3.09e-09!3;CL:0000067!3.09e-09!3;CL:0002304!3.09e-09!3;CL:0000133!6.96e-09!59;CL:0000325!7.03e-09!39;CL:0002586!2.52e-08!3;CL:0002077!3.01e-08!33;CL:0002580!1.99e-07!3;CL:0000197!2.12e-07!6;CL:0000098!2.12e-07!6;CL:0002167!2.12e-07!6 | |ontology_enrichment_celltype=CL:0000075!3.37e-15!27;CL:0000710!5.61e-13!20;CL:0000147!1.36e-09!14;CL:0000064!3.09e-09!3;CL:0005012!3.09e-09!3;CL:0000067!3.09e-09!3;CL:0002304!3.09e-09!3;CL:0000133!6.96e-09!59;CL:0000325!7.03e-09!39;CL:0002586!2.52e-08!3;CL:0002077!3.01e-08!33;CL:0002580!1.99e-07!3;CL:0000197!2.12e-07!6;CL:0000098!2.12e-07!6;CL:0002167!2.12e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.01e-25;3!CL:0000067;2.01e-25;3!CL:0005012;2.01e-25;3!CL:0002304;2.01e-25;3!CL:0000075;1.12e-22;27!CL:0000197;4.38e-21;6!CL:0000098;4.38e-21;6!CL:0002167;4.38e-21;6!CL:0000710;7.48e-19;20!CL:0000333;1.22e-15;5!CL:0002077;3.62e-10;34!CL:0000342;2.55e-09;1!CL:0002574;2.55e-09;1!CL:0002565;2.55e-09;1!CL:0000306;5.19e-09;4!CL:0002222;5.19e-09;4!CL:0002224;5.19e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.01e-25,3;CL:0000067,2.01e-25,3;CL:0005012,2.01e-25,3;CL:0002304,2.01e-25,3;CL:0000075,1.14e-22,27;CL:0000197,4.62e-21,6;CL:0000098,4.62e-21,6;CL:0002167,4.62e-21,6;CL:0000710,7.69e-19,20;CL:0000133,3.49e-14,59;CL:0000221,2.28e-11,72;CL:0002077,8.97e-11,34;CL:0002574,2.55e-09,1;CL:0000342,2.77e-09,1;CL:0002565,2.77e-09,1;CL:0000306,5.09e-09,4;CL:0002222,5.09e-09,4;CL:0002224,5.09e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.32e-25;3!UBERON:0004874;4.32e-09;1!CL:0000221;2.85e-08;72!CL:0000133;2.87e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;4.01e-13;6!DOID:171;4.57e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.93e-13,6;DOID:171,4.51e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007625!9.65e-23!11;UBERON:0000970!1.01e-19!20;UBERON:0000020!2.24e-19!23;UBERON:0002346!2.74e-19!90;UBERON:0003075!3.74e-19!86;UBERON:0007284!3.74e-19!86;UBERON:0002104!1.30e-18!21;UBERON:0000033!1.37e-18!123;UBERON:0001456!1.85e-18!21;UBERON:0000153!2.05e-18!129;UBERON:0007811!2.05e-18!129;UBERON:0001032!2.08e-18!24;UBERON:0004456!2.08e-18!24;UBERON:0003076!4.19e-18!15;UBERON:0003057!4.19e-18!15;UBERON:0000924!7.36e-18!173;UBERON:0006601!7.36e-18!173;UBERON:0000019!1.28e-17!19;UBERON:0000047!1.28e-17!19;UBERON:0004088!1.28e-17!19;UBERON:0003072!1.28e-17!19;UBERON:0003071!1.28e-17!19;UBERON:0004128!1.28e-17!19;UBERON:0004121!1.55e-17!169;UBERON:0001444!3.53e-16!48;UBERON:0000073!8.05e-15!94;UBERON:0001016!8.05e-15!94;UBERON:0005743!6.25e-13!86;UBERON:0000966!8.08e-13!5;UBERON:0005388!8.08e-13!5;UBERON:0001802!8.08e-13!5;UBERON:0004733!1.38e-12!12;UBERON:0002028!1.38e-12!12;UBERON:0007277!1.38e-12!12;UBERON:0000488!1.22e-11!4;UBERON:0004732!1.69e-11!13;UBERON:0005085!1.70e-10!29;UBERON:0002680!4.18e-10!9;UBERON:0001895!4.18e-10!9;UBERON:0010092!4.18e-10!9;UBERON:0000063!1.12e-09!97;UBERON:0003056!1.20e-09!61;UBERON:0001778!3.09e-09!3;UBERON:0001775!3.09e-09!3;UBERON:0001017!3.58e-09!82;UBERON:0001049!6.71e-09!57;UBERON:0005068!6.71e-09!57;UBERON:0006241!6.71e-09!57;UBERON:0007135!6.71e-09!57;UBERON:0001801!1.14e-08!14;UBERON:0001781!2.52e-08!3;UBERON:0001782!2.52e-08!3;UBERON:0005424!2.52e-08!3;UBERON:0000988!3.23e-08!3;UBERON:0000475!5.65e-08!365;UBERON:0002203!1.04e-07!6;UBERON:0001768!1.04e-07!6;UBERON:0002240!1.13e-07!3;UBERON:0002298!1.50e-07!8;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69 | |ontology_enrichment_uberon=UBERON:0007625!9.65e-23!11;UBERON:0000970!1.01e-19!20;UBERON:0000020!2.24e-19!23;UBERON:0002346!2.74e-19!90;UBERON:0003075!3.74e-19!86;UBERON:0007284!3.74e-19!86;UBERON:0002104!1.30e-18!21;UBERON:0000033!1.37e-18!123;UBERON:0001456!1.85e-18!21;UBERON:0000153!2.05e-18!129;UBERON:0007811!2.05e-18!129;UBERON:0001032!2.08e-18!24;UBERON:0004456!2.08e-18!24;UBERON:0003076!4.19e-18!15;UBERON:0003057!4.19e-18!15;UBERON:0000924!7.36e-18!173;UBERON:0006601!7.36e-18!173;UBERON:0000019!1.28e-17!19;UBERON:0000047!1.28e-17!19;UBERON:0004088!1.28e-17!19;UBERON:0003072!1.28e-17!19;UBERON:0003071!1.28e-17!19;UBERON:0004128!1.28e-17!19;UBERON:0004121!1.55e-17!169;UBERON:0001444!3.53e-16!48;UBERON:0000073!8.05e-15!94;UBERON:0001016!8.05e-15!94;UBERON:0005743!6.25e-13!86;UBERON:0000966!8.08e-13!5;UBERON:0005388!8.08e-13!5;UBERON:0001802!8.08e-13!5;UBERON:0004733!1.38e-12!12;UBERON:0002028!1.38e-12!12;UBERON:0007277!1.38e-12!12;UBERON:0000488!1.22e-11!4;UBERON:0004732!1.69e-11!13;UBERON:0005085!1.70e-10!29;UBERON:0002680!4.18e-10!9;UBERON:0001895!4.18e-10!9;UBERON:0010092!4.18e-10!9;UBERON:0000063!1.12e-09!97;UBERON:0003056!1.20e-09!61;UBERON:0001778!3.09e-09!3;UBERON:0001775!3.09e-09!3;UBERON:0001017!3.58e-09!82;UBERON:0001049!6.71e-09!57;UBERON:0005068!6.71e-09!57;UBERON:0006241!6.71e-09!57;UBERON:0007135!6.71e-09!57;UBERON:0001801!1.14e-08!14;UBERON:0001781!2.52e-08!3;UBERON:0001782!2.52e-08!3;UBERON:0005424!2.52e-08!3;UBERON:0000988!3.23e-08!3;UBERON:0000475!5.65e-08!365;UBERON:0002203!1.04e-07!6;UBERON:0001768!1.04e-07!6;UBERON:0002240!1.13e-07!3;UBERON:0002298!1.50e-07!8;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.61e-35;11!UBERON:0000488;5.78e-33;4!UBERON:0000970;1.67e-31;20!UBERON:0002104;6.06e-30;21!UBERON:0000020;3.13e-27;23!UBERON:0000019;3.03e-26;19!UBERON:0000047;3.03e-26;19!UBERON:0004088;3.03e-26;19!UBERON:0010230;3.03e-26;19!UBERON:0001032;4.82e-26;24!UBERON:0004456;4.82e-26;24!UBERON:0001778;2.01e-25;3!UBERON:0001775;2.01e-25;3!UBERON:0001456;1.19e-23;21!UBERON:0002203;4.42e-22;6!UBERON:0001768;4.42e-22;6!UBERON:0002200;4.42e-22;6!UBERON:0001801;1.75e-20;14!UBERON:0000013;1.22e-15;5!UBERON:0002410;1.22e-15;5!UBERON:0002037;9.16e-13;6!UBERON:0006876;3.83e-12;11!UBERON:0010371;3.25e-11;31!UBERON:0002506;2.55e-09;1!UBERON:0001769;2.55e-09;1!UBERON:0000989;4.32e-09;1!UBERON:0008811;4.32e-09;1!UBERON:0010077;5.19e-09;4!UBERON:0005389;5.19e-09;4!UBERON:0000484;5.19e-09;4!UBERON:0000965;5.19e-09;4!UBERON:0001803;5.19e-09;4!UBERON:0000010;6.50e-09;8!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0000966;2.25e-07;5!UBERON:0005388;2.25e-07;5!UBERON:0001802;2.25e-07;5!UBERON:0001444;4.88e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.97e-35,11;UBERON:0000488,6.27e-33,4;UBERON:0000970,6.60e-30,21;UBERON:0002104,6.60e-30,21;UBERON:0000020,5.20e-26,24;UBERON:0001032,5.20e-26,24;UBERON:0004456,5.20e-26,24;UBERON:0001778,2.01e-25,3;UBERON:0001775,2.01e-25,3;UBERON:0000019,7.68e-25,20;UBERON:0000047,7.68e-25,20;UBERON:0010312,7.68e-25,20;UBERON:0004088,7.68e-25,20;UBERON:0010230,7.68e-25,20;UBERON:0003072,7.68e-25,20;UBERON:0004128,7.68e-25,20;UBERON:0003071,7.68e-25,20;UBERON:0001456,1.72e-22,22;UBERON:0002203,4.67e-22,6;UBERON:0001768,4.67e-22,6;UBERON:0002200,4.67e-22,6;UBERON:0001801,1.78e-20,14;UBERON:0005085,1.16e-15,31;UBERON:0000013,1.20e-15,5;UBERON:0002410,1.20e-15,5;UBERON:0002037,9.16e-13,6;UBERON:0006215,9.16e-13,6;UBERON:0006876,3.94e-12,11;UBERON:0003075,6.07e-10,82;UBERON:0007284,6.07e-10,82;UBERON:0001444,1.61e-09,49;UBERON:0002346,2.11e-09,86;UBERON:0002506,2.77e-09,1;UBERON:0001769,2.77e-09,1;UBERON:0000989,3.83e-09,1;UBERON:0008811,3.83e-09,1;UBERON:0006258,3.83e-09,1;UBERON:0005876,3.83e-09,1;UBERON:0004874,3.83e-09,1;UBERON:0010077,5.09e-09,4;UBERON:0005389,5.09e-09,4;UBERON:0000484,5.09e-09,4;UBERON:0002546,5.09e-09,4;UBERON:0000965,5.09e-09,4;UBERON:0001803,5.09e-09,4;UBERON:0003073,5.09e-09,4;UBERON:0005426,5.09e-09,4;UBERON:0000010,6.42e-09,8;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0000033,3.40e-08,56;UBERON:0004121,8.67e-08,171;UBERON:0000924,8.67e-08,171;UBERON:0006601,8.67e-08,171;UBERON:0010371,1.78e-07,104;UBERON:0000153,2.68e-07,62;UBERON:0007811,2.68e-07,62;UBERON:0003056,2.68e-07,61 | |||
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| ||
|short_description=p2@NBEA | |short_description=p2@NBEA | ||
}} | }} |
Latest revision as of 05:13, 17 September 2015
Short description: | p2@NBEA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NBEA_5end |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | -13bp_to_uc010teg.1_5end |
EntrezGene: | NBEA |
HGNC: | 7648 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.01e-25 | 3 |
ciliated epithelial cell | 2.01e-25 | 3 |
multi-ciliated epithelial cell | 2.01e-25 | 3 |
non-pigmented ciliary epithelial cell | 2.01e-25 | 3 |
columnar/cuboidal epithelial cell | 1.14e-22 | 27 |
receptor cell | 4.62e-21 | 6 |
sensory epithelial cell | 4.62e-21 | 6 |
olfactory epithelial cell | 4.62e-21 | 6 |
neurecto-epithelial cell | 7.69e-19 | 20 |
neurectodermal cell | 3.49e-14 | 59 |
ectodermal cell | 2.28e-11 | 72 |
ecto-epithelial cell | 8.97e-11 | 34 |
stromal cell of pancreas | 2.55e-09 | 1 |
pigment cell (sensu Vertebrata) | 2.77e-09 | 1 |
iris pigment epithelial cell | 2.77e-09 | 1 |
crystallin accumulating cell | 5.09e-09 | 4 |
vertebrate lens cell | 5.09e-09 | 4 |
lens epithelial cell | 5.09e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.93e-13 | 6 |
neuroectodermal tumor | 4.51e-08 | 10 |