FFCP PHASE1:Hg19::chr14:103599694..103599717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7127 | |EntrezGene=7127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11895 | |HGNC=11895 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-397bp_to_AK309854_5end | |association_with_transcript=-397bp_to_AK309854_5end | ||
|cluster_id=chr14:103599694..103599717,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_14_at_TNFAIP2_5end | |description=CAGE_peak_14_at_TNFAIP2_5end | ||
|id=chr14:103599694..103599717,+ | |id=chr14:103599694..103599717,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.09e-52!42;CL:0000860!2.15e-47!45;CL:0002194!1.19e-38!63;CL:0000576!1.19e-38!63;CL:0000040!1.19e-38!63;CL:0000559!1.19e-38!63;CL:0002009!6.49e-37!65;CL:0000766!2.55e-35!76;CL:0000839!5.16e-33!70;CL:0000557!2.66e-32!71;CL:0000763!4.70e-26!112;CL:0000049!4.70e-26!112;CL:0000738!2.23e-21!140;CL:0002087!3.43e-21!119;CL:0002031!8.59e-18!124;CL:0002032!4.48e-17!165;CL:0000837!4.48e-17!165;CL:0000037!5.40e-17!172;CL:0000566!5.40e-17!172;CL:0000988!3.28e-16!182;CL:0002393!1.59e-10!9;CL:0002397!1.59e-10!9;CL:0000134!8.91e-08!358;CL:0002320!3.43e-07!365 | |ontology_enrichment_celltype=CL:0002057!5.09e-52!42;CL:0000860!2.15e-47!45;CL:0002194!1.19e-38!63;CL:0000576!1.19e-38!63;CL:0000040!1.19e-38!63;CL:0000559!1.19e-38!63;CL:0002009!6.49e-37!65;CL:0000766!2.55e-35!76;CL:0000839!5.16e-33!70;CL:0000557!2.66e-32!71;CL:0000763!4.70e-26!112;CL:0000049!4.70e-26!112;CL:0000738!2.23e-21!140;CL:0002087!3.43e-21!119;CL:0002031!8.59e-18!124;CL:0002032!4.48e-17!165;CL:0000837!4.48e-17!165;CL:0000037!5.40e-17!172;CL:0000566!5.40e-17!172;CL:0000988!3.28e-16!182;CL:0002393!1.59e-10!9;CL:0002397!1.59e-10!9;CL:0000134!8.91e-08!358;CL:0002320!3.43e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.32e-112;33!CL:0002057;2.32e-112;33!CL:0000473;1.94e-89;39!CL:0000234;1.94e-89;39!CL:0000576;9.94e-58;48!CL:0000766;1.35e-35;69!CL:0000763;1.09e-18;100!CL:0002087;9.51e-16;104!CL:0000738;3.77e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.34e-105,42;CL:0002057,8.34e-105,42;CL:0000473,5.54e-104,48;CL:0000234,5.54e-104,48;CL:0002194,1.77e-87,59;CL:0000576,1.77e-87,59;CL:0000040,1.77e-87,59;CL:0000559,1.77e-87,59;CL:0002009,1.84e-84,61;CL:0000839,1.04e-77,66;CL:0000557,1.77e-76,67;CL:0000766,8.27e-76,72;CL:0000763,5.87e-52,108;CL:0000049,5.87e-52,108;CL:0002087,2.65e-42,115;CL:0002031,2.67e-40,120;CL:0000738,4.69e-40,136;CL:0002032,6.76e-33,161;CL:0000837,6.76e-33,161;CL:0000037,2.86e-31,168;CL:0000988,2.29e-29,177;CL:0000134,1.81e-11,354;CL:0002320,4.05e-11,361;CL:0000219,6.98e-10,386;CL:0000048,2.28e-08,427;CL:0000723,3.69e-08,433;CL:0000034,6.88e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.04e-76;42!CL:0000049;3.83e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-29!102;UBERON:0003061!1.21e-29!102;UBERON:0002371!3.41e-28!80;UBERON:0002193!1.95e-27!112;UBERON:0001474!5.20e-25!86;UBERON:0004765!7.59e-21!101;UBERON:0001434!7.59e-21!101;UBERON:0002405!1.13e-17!115;UBERON:0003081!1.18e-11!216;UBERON:0002204!1.13e-10!167;UBERON:0000926!4.20e-07!448;UBERON:0004120!4.20e-07!448;UBERON:0006603!4.20e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!1.21e-29!102;UBERON:0003061!1.21e-29!102;UBERON:0002371!3.41e-28!80;UBERON:0002193!1.95e-27!112;UBERON:0001474!5.20e-25!86;UBERON:0004765!7.59e-21!101;UBERON:0001434!7.59e-21!101;UBERON:0002405!1.13e-17!115;UBERON:0003081!1.18e-11!216;UBERON:0002204!1.13e-10!167;UBERON:0000926!4.20e-07!448;UBERON:0004120!4.20e-07!448;UBERON:0006603!4.20e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.87e-67,76;UBERON:0001474,1.47e-61,82;UBERON:0002390,1.49e-57,98;UBERON:0003061,1.49e-57,98;UBERON:0004765,1.30e-55,90;UBERON:0002405,1.22e-53,93;UBERON:0002193,1.06e-51,108;UBERON:0001434,1.69e-49,100;UBERON:0002204,2.78e-27,167;UBERON:0003081,1.14e-24,203;UBERON:0000926,1.29e-13,315;UBERON:0004120,1.29e-13,315;UBERON:0006603,1.29e-13,315;UBERON:0002384,1.22e-10,371 | |||
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| ||
|short_description=p14@TNFAIP2 | |short_description=p14@TNFAIP2 | ||
}} | }} |
Latest revision as of 14:52, 18 September 2015
Short description: | p14@TNFAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TNFAIP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -397bp_to_AK309854_5end |
EntrezGene: | TNFAIP2 |
HGNC: | 11895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.34e-105 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.34e-105 | 42 |
defensive cell | 5.54e-104 | 48 |
phagocyte | 5.54e-104 | 48 |
monopoietic cell | 1.77e-87 | 59 |
monocyte | 1.77e-87 | 59 |
monoblast | 1.77e-87 | 59 |
promonocyte | 1.77e-87 | 59 |
macrophage dendritic cell progenitor | 1.84e-84 | 61 |
myeloid lineage restricted progenitor cell | 1.04e-77 | 66 |
granulocyte monocyte progenitor cell | 1.77e-76 | 67 |
myeloid leukocyte | 8.27e-76 | 72 |
myeloid cell | 5.87e-52 | 108 |
common myeloid progenitor | 5.87e-52 | 108 |
nongranular leukocyte | 2.65e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 2.67e-40 | 120 |
leukocyte | 4.69e-40 | 136 |
hematopoietic oligopotent progenitor cell | 6.76e-33 | 161 |
hematopoietic multipotent progenitor cell | 6.76e-33 | 161 |
hematopoietic stem cell | 2.86e-31 | 168 |
hematopoietic cell | 2.29e-29 | 177 |
mesenchymal cell | 1.81e-11 | 354 |
connective tissue cell | 4.05e-11 | 361 |
motile cell | 6.98e-10 | 386 |
multi fate stem cell | 2.28e-08 | 427 |
somatic stem cell | 3.69e-08 | 433 |
stem cell | 6.88e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.87e-67 | 76 |
bone element | 1.47e-61 | 82 |
hematopoietic system | 1.49e-57 | 98 |
blood island | 1.49e-57 | 98 |
skeletal element | 1.30e-55 | 90 |
immune system | 1.22e-53 | 93 |
hemolymphoid system | 1.06e-51 | 108 |
skeletal system | 1.69e-49 | 100 |
musculoskeletal system | 2.78e-27 | 167 |
lateral plate mesoderm | 1.14e-24 | 203 |
mesoderm | 1.29e-13 | 315 |
mesoderm-derived structure | 1.29e-13 | 315 |
presumptive mesoderm | 1.29e-13 | 315 |
connective tissue | 1.22e-10 | 371 |