FFCP PHASE1:Hg19::chr19:39900924..39900973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39900924..39900973,+ | |||
|coexpression_cluster_id=C3787 | |||
|description=CAGE_peak_at_chr19:39900924..39900973,+ | |description=CAGE_peak_at_chr19:39900924..39900973,+ | ||
|id=chr19:39900924..39900973,+ | |id=chr19:39900924..39900973,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.45e-25!140;CL:0002087!2.62e-20!119;CL:0000037!5.95e-20!172;CL:0000566!5.95e-20!172;CL:0002032!8.92e-20!165;CL:0000837!8.92e-20!165;CL:0002031!1.81e-19!124;CL:0002057!3.03e-19!42;CL:0000988!5.31e-19!182;CL:0000860!3.10e-18!45;CL:0000766!2.62e-16!76;CL:0000557!2.01e-12!71;CL:0000763!1.11e-11!112;CL:0000049!1.11e-11!112;CL:0002009!1.46e-11!65;CL:0000839!2.71e-11!70;CL:0002194!7.29e-11!63;CL:0000576!7.29e-11!63;CL:0000040!7.29e-11!63;CL:0000559!7.29e-11!63;CL:0000542!2.63e-08!53;CL:0000051!2.63e-08!53;CL:0000838!5.54e-08!52 | |ontology_enrichment_celltype=CL:0000738!1.45e-25!140;CL:0002087!2.62e-20!119;CL:0000037!5.95e-20!172;CL:0000566!5.95e-20!172;CL:0002032!8.92e-20!165;CL:0000837!8.92e-20!165;CL:0002031!1.81e-19!124;CL:0002057!3.03e-19!42;CL:0000988!5.31e-19!182;CL:0000860!3.10e-18!45;CL:0000766!2.62e-16!76;CL:0000557!2.01e-12!71;CL:0000763!1.11e-11!112;CL:0000049!1.11e-11!112;CL:0002009!1.46e-11!65;CL:0000839!2.71e-11!70;CL:0002194!7.29e-11!63;CL:0000576!7.29e-11!63;CL:0000040!7.29e-11!63;CL:0000559!7.29e-11!63;CL:0000542!2.63e-08!53;CL:0000051!2.63e-08!53;CL:0000838!5.54e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-21;33!CL:0002057;3.19e-21;33!CL:0000576;8.75e-19;48!CL:0000766;1.65e-17;69!CL:0000473;3.50e-16;39!CL:0000234;3.50e-16;39!CL:0002393;3.41e-10;6!CL:0002397;3.41e-10;6!CL:0000094;3.50e-10;8!CL:0000738;5.66e-09;136!CL:0002087;1.09e-08;104!CL:0000623;2.90e-08;3!CL:0000226;4.92e-08;3!CL:0000842;4.92e-08;3!CL:0000775;7.99e-08;3!CL:0000763;2.09e-07;100!CL:0000081;3.61e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.02e-35,136;CL:0000766,5.08e-34,72;CL:0000860,5.38e-34,42;CL:0002057,5.38e-34,42;CL:0000473,1.07e-28,48;CL:0000234,1.07e-28,48;CL:0000037,2.79e-27,168;CL:0002087,6.12e-27,115;CL:0002031,1.15e-26,120;CL:0000557,1.47e-26,67;CL:0000988,4.02e-25,177;CL:0000839,4.47e-25,66;CL:0002032,6.31e-25,161;CL:0000837,6.31e-25,161;CL:0002009,5.71e-24,61;CL:0002194,5.09e-23,59;CL:0000576,5.09e-23,59;CL:0000040,5.09e-23,59;CL:0000559,5.09e-23,59;CL:0000763,7.15e-22,108;CL:0000049,7.15e-22,108;CL:0002393,4.97e-12,9;CL:0002397,4.97e-12,9;CL:0002320,2.27e-11,361;CL:0000134,2.79e-11,354;CL:0000094,2.60e-10,8;CL:0000219,6.63e-09,386;CL:0000623,3.04e-08,3;CL:0000825,3.04e-08,3;CL:0000226,3.85e-08,3;CL:0000842,3.85e-08,3;CL:0000775,5.46e-08,3;CL:0000081,2.93e-07,11;CL:0000048,3.46e-07,427;CL:0000034,6.06e-07,441;CL:0000723,7.05e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.94e-26;42!CL:0000049;7.74e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.47e-13!102;UBERON:0003061!1.47e-13!102;UBERON:0002193!3.13e-11!112;UBERON:0002371!2.21e-10!80;UBERON:0001474!6.66e-10!86;UBERON:0002405!3.27e-08!115;UBERON:0004765!5.29e-08!101;UBERON:0001434!5.29e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.71e-24,76;UBERON:0002390,2.63e-23,98;UBERON:0003061,2.63e-23,98;UBERON:0001474,5.59e-23,82;UBERON:0004765,1.66e-21,90;UBERON:0001434,4.43e-21,100;UBERON:0002405,2.48e-20,93;UBERON:0002193,3.69e-20,108;UBERON:0002384,1.26e-10,371;UBERON:0003081,5.65e-10,203;UBERON:0002204,1.94e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.393553906568396,2.36018566109342,0.383829398097213,0.928896739896456,0,0,0,0.309868802321207,0,0,2.21598163412751,11.6315779532682,9.76548918221333,0,0.32389366601898,0.257575567634187,1.45398238779565,0.377875943688809,0.242584061187816,2.32429036905685,2.05583944010913,2.16794459626573,2.8769239232215,3.07392847834921,0.47296445977717,1.03423704220986,0,1.35426486594342,2.07066573496865,1.63743690034707,0,0.612167784741805,0.641858054152187,1.91801137739712,1.64925650093358,1.39624560335142,1.27867425159808,1.16083695451434,0,0.622822248995575,2.00998932205395,3.12889751052121,1.3031330682307,0.605399502633369,0.368277635987565,0.316462387440884,0,6.37812899895131,1.88692780957538,1.34794357375794,1.65194582125657,3.2145117339416,1.42506371870624,1.19350006319454,0.365328307529268,0,0,0,0.426730222566507,0,0.574752439954483,0,0,4.55370375287559,0.587237189370939,2.6759125968766,0,1.68152568894461,0,0.983548850569165,2.75107533924415,4.93443597598822,0,0.32592226663359,0.946895611469467,0,0.779873198196215,1.17842362989935,0.664601683750863,0.541607727530031,0.768547918354051,1.69077151827842,0.328875809207352,0.276350017785848,0,1.03800594213442,0.267540828089713,1.04535523804977,0.113309342697566,1.14966148080576,0.34362744548263,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.710331756132051,0.821127996921047,2.01606743224732,4.01160293675261,1.01377082717959,0,0.670700859703636,0,0.361439152384566,0,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,11.6334079244498,0,0.993943903390637,0.12663051166458,0.132409180813219,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.600182192168805,0,1.03056216018252,0,0.843881661206331,0.0974370051611986,1.00973509697646,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.243947412259191,0.265059536642971,0.116193942869518,0,0,0,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.264145302039678,4.35389042635621,1.44119953416961,2.01987893482208,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,1.71573592389777,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,1.00876629594175,2.1673383622212,6.68445482064504,5.51875056002918,0,0,0,0,0.637938751653163,3.74503511973591,8.97484377612075,1.65766205374414,0.36807447515742,1.50051156317903,0,1.66376689224646,3.21172179834891,0.630809660135739,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,2.48121631347465,7.54999702865159,2.66818894508611,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,1.9676842561399,0,0.6196469961995,0,0.286822704408103,0,0,0,1.05553817648832,4.61012850143863,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0.245040215981032,0.557409525377156,0.28853842595289,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0,0.481764225311099,0,0.425846237690326,0.687010689511529,0,0,0,0,0.278406173895242,0,0.540911356951966,0,1.4098700508785,0,0,0,0.334330152832435,0,0,0,0,0.994147647766298,0,0.333926115068718,0,0.422250816255987,6.5751836122853,1.10513566212459,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0.254253650292766,0,0,0,0,0,0,0,0.442317039724898,0,0,0.10893846351899,0.41827123283581,0.846452843541768,0,0,0,0.217294743844016,0,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.522109747527277,0.404406797884062,0.802577647298789,0,0.547364367646998,0.19566461893209,0.485560759068186,0,0,0,4.23350083510869,0.450970258243478,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0.173559738335131,0.489961987071888,0,0,0.171986032471617,0.19351266257817,0.0730893170861856,0,0.290967049465258,0.0882561266915003,0.225980740780532,0,0,0.06331079595587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| ||
|short_description=p@chr19:39900924..39900973,+ | |short_description=p@chr19:39900924..39900973,+ | ||
}} | }} |
Latest revision as of 07:39, 26 July 2015
Short description: | p@chr19:39900924..39900973, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39900924..39900973, + |
Coexpression cluster: | C3787_CD14_Eosinophils_Neutrophils_Peripheral_aorta_Natural_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.71e-24 | 76 |
hematopoietic system | 2.63e-23 | 98 |
blood island | 2.63e-23 | 98 |
bone element | 5.59e-23 | 82 |
skeletal element | 1.66e-21 | 90 |
skeletal system | 4.43e-21 | 100 |
immune system | 2.48e-20 | 93 |
hemolymphoid system | 3.69e-20 | 108 |
connective tissue | 1.26e-10 | 371 |
lateral plate mesoderm | 5.65e-10 | 203 |
musculoskeletal system | 1.94e-09 | 167 |