FFCP PHASE1:Hg19::chr19:54376882..54376900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=-95bp_to_AK027693_5end | |association_with_transcript=-95bp_to_AK027693_5end | ||
|cluster_id=chr19:54376882..54376900,+ | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_13_at_MYADM_5end | |description=CAGE_peak_13_at_MYADM_5end | ||
|id=chr19:54376882..54376900,+ | |id=chr19:54376882..54376900,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.23e-16!42;CL:0000860!6.62e-14!45;CL:0000766!7.83e-10!76;CL:0000048!1.77e-09!430;CL:0000723!1.05e-08!436;CL:0000034!3.48e-08!444;CL:0000557!6.22e-08!71;CL:0000839!2.22e-07!70;CL:0000134!3.60e-07!358;CL:0002320!4.44e-07!365;CL:0000763!4.64e-07!112;CL:0000049!4.64e-07!112 | |ontology_enrichment_celltype=CL:0002057!1.23e-16!42;CL:0000860!6.62e-14!45;CL:0000766!7.83e-10!76;CL:0000048!1.77e-09!430;CL:0000723!1.05e-08!436;CL:0000034!3.48e-08!444;CL:0000557!6.22e-08!71;CL:0000839!2.22e-07!70;CL:0000134!3.60e-07!358;CL:0002320!4.44e-07!365;CL:0000763!4.64e-07!112;CL:0000049!4.64e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.88e-28;33!CL:0002057;6.88e-28;33!CL:0000473;2.90e-19;39!CL:0000234;2.90e-19;39!CL:0000576;3.13e-11;48!CL:0000766;1.37e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.08e-22,42;CL:0002057,3.08e-22,42;CL:0000473,1.30e-18,48;CL:0000234,1.30e-18,48;CL:0000766,1.70e-17,72;CL:0000557,4.05e-14,67;CL:0000839,1.08e-13,66;CL:0002009,2.94e-12,61;CL:0002194,2.99e-12,59;CL:0000576,2.99e-12,59;CL:0000040,2.99e-12,59;CL:0000559,2.99e-12,59;CL:0000048,1.11e-09,427;CL:0000763,2.52e-09,108;CL:0000049,2.52e-09,108;CL:0000723,4.96e-09,433;CL:0000034,3.29e-08,441;CL:0000134,6.21e-08,354;CL:0002320,3.22e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.76e-13!216;UBERON:0002204!1.10e-09!167;UBERON:0000926!1.57e-09!448;UBERON:0004120!1.57e-09!448;UBERON:0006603!1.57e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.98e-17,203;UBERON:0000926,4.06e-13,315;UBERON:0004120,4.06e-13,315;UBERON:0006603,4.06e-13,315;UBERON:0002371,2.11e-12,76;UBERON:0001474,2.60e-11,82;UBERON:0002204,2.88e-11,167;UBERON:0004765,1.33e-09,90;UBERON:0002390,1.49e-09,98;UBERON:0003061,1.49e-09,98;UBERON:0002405,5.66e-09,93;UBERON:0001434,8.56e-09,100;UBERON:0002193,1.52e-08,108;UBERON:0001637,2.39e-07,42;UBERON:0003509,2.39e-07,42;UBERON:0004572,2.39e-07,42;UBERON:0002384,9.68e-07,371 | |||
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| ||
|short_description=p13@MYADM | |short_description=p13@MYADM | ||
}} | }} |
Latest revision as of 20:07, 19 September 2015
Short description: | p13@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | -95bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.08e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-22 | 42 |
defensive cell | 1.30e-18 | 48 |
phagocyte | 1.30e-18 | 48 |
myeloid leukocyte | 1.70e-17 | 72 |
granulocyte monocyte progenitor cell | 4.05e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.08e-13 | 66 |
macrophage dendritic cell progenitor | 2.94e-12 | 61 |
monopoietic cell | 2.99e-12 | 59 |
monocyte | 2.99e-12 | 59 |
monoblast | 2.99e-12 | 59 |
promonocyte | 2.99e-12 | 59 |
multi fate stem cell | 1.11e-09 | 427 |
myeloid cell | 2.52e-09 | 108 |
common myeloid progenitor | 2.52e-09 | 108 |
somatic stem cell | 4.96e-09 | 433 |
stem cell | 3.29e-08 | 441 |
mesenchymal cell | 6.21e-08 | 354 |
connective tissue cell | 3.22e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.98e-17 | 203 |
mesoderm | 4.06e-13 | 315 |
mesoderm-derived structure | 4.06e-13 | 315 |
presumptive mesoderm | 4.06e-13 | 315 |
bone marrow | 2.11e-12 | 76 |
bone element | 2.60e-11 | 82 |
musculoskeletal system | 2.88e-11 | 167 |
skeletal element | 1.33e-09 | 90 |
hematopoietic system | 1.49e-09 | 98 |
blood island | 1.49e-09 | 98 |
immune system | 5.66e-09 | 93 |
skeletal system | 8.56e-09 | 100 |
hemolymphoid system | 1.52e-08 | 108 |
artery | 2.39e-07 | 42 |
arterial blood vessel | 2.39e-07 | 42 |
arterial system | 2.39e-07 | 42 |
connective tissue | 9.68e-07 | 371 |