FFCP PHASE1:Hg19::chr1:116915494..116915499,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=476 | |EntrezGene=476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=799 | |HGNC=799 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TC02 | |UniProt=Q5TC02 | ||
|association_with_transcript=204bp_to_ENST00000418797_5end | |association_with_transcript=204bp_to_ENST00000418797_5end | ||
|cluster_id=chr1:116915494..116915499,+ | |||
|coexpression_cluster_id=C3331 | |||
|description=CAGE_peak_52_at_ATP1A1_5end | |description=CAGE_peak_52_at_ATP1A1_5end | ||
|id=chr1:116915494..116915499,+ | |id=chr1:116915494..116915499,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!6.10e-24!20;UBERON:0000956!1.21e-21!25;UBERON:0000203!1.21e-21!25;UBERON:0001869!1.34e-21!32;UBERON:0002619!1.43e-21!22;UBERON:0001893!3.99e-20!34;UBERON:0002020!5.84e-20!34;UBERON:0003528!5.84e-20!34;UBERON:0002780!2.07e-18!41;UBERON:0001890!2.07e-18!41;UBERON:0006240!2.07e-18!41;UBERON:0002616!2.91e-18!59;UBERON:0000955!4.07e-18!69;UBERON:0006238!4.07e-18!69;UBERON:0002791!4.73e-18!33;UBERON:0003080!7.06e-18!42;UBERON:0007023!4.21e-17!115;UBERON:0001049!4.33e-17!57;UBERON:0005068!4.33e-17!57;UBERON:0006241!4.33e-17!57;UBERON:0007135!4.33e-17!57;UBERON:0001017!6.25e-16!82;UBERON:0005743!6.40e-15!86;UBERON:0000200!4.21e-14!6;UBERON:0000073!5.82e-13!94;UBERON:0001016!5.82e-13!94;UBERON:0002346!1.07e-12!90;UBERON:0003075!3.17e-12!86;UBERON:0007284!3.17e-12!86;UBERON:0003056!4.56e-11!61;UBERON:0002021!5.06e-11!5;UBERON:0002771!8.87e-11!3;UBERON:0000153!8.91e-11!129;UBERON:0007811!8.91e-11!129;UBERON:0000033!1.24e-10!123;UBERON:0001871!7.45e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;3.10e-50;1!UBERON:0009899;3.10e-50;1!UBERON:0007190;3.10e-50;1!UBERON:0002021;2.71e-40;5!UBERON:0001893;1.24e-13;34!UBERON:0001869;1.67e-12;32!UBERON:0000955;4.70e-11;68!UBERON:0001950;1.69e-10;20!UBERON:0002619;1.12e-09;22!UBERON:0000200;1.38e-09;6!UBERON:0000956;1.11e-08;25!UBERON:0000203;1.11e-08;25!UBERON:0002780;3.85e-08;41!UBERON:0001890;3.85e-08;41!UBERON:0001017;5.52e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,3.99e-50,1;UBERON:0009899,3.99e-50,1;UBERON:0007190,6.58e-50,1;UBERON:0002021,2.71e-40,5;UBERON:0001869,2.31e-14,32;UBERON:0001893,1.35e-13,34;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0001950,1.69e-10,20;UBERON:0001017,2.17e-10,81;UBERON:0002619,1.12e-09,22;UBERON:0000200,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0000956,1.11e-08,25;UBERON:0000203,1.11e-08,25;UBERON:0003056,4.61e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0002791,4.74e-07,32 | |||
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| ||
|short_description=p52@ATP1A1 | |short_description=p52@ATP1A1 | ||
}} | }} |
Latest revision as of 08:46, 16 September 2015
Short description: | p52@ATP1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_ATP1A1_5end |
Coexpression cluster: | C3331_brain_occipital_paracentral_parietal_insula_postcentral_pons |
Association with transcript: | 204bp_to_ENST00000418797_5end |
EntrezGene: | ATP1A1 |
HGNC: | 799 |
UniProt: | Q5TC02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 3.99e-50 | 1 |
pole of cerebral hemisphere | 3.99e-50 | 1 |
paracentral gyrus | 6.58e-50 | 1 |
occipital lobe | 2.71e-40 | 5 |
cerebral hemisphere | 2.31e-14 | 32 |
telencephalon | 1.35e-13 | 34 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
regional part of forebrain | 1.73e-11 | 41 |
forebrain | 1.73e-11 | 41 |
anterior neural tube | 1.73e-11 | 41 |
future forebrain | 1.73e-11 | 41 |
neocortex | 1.69e-10 | 20 |
central nervous system | 2.17e-10 | 81 |
regional part of cerebral cortex | 1.12e-09 | 22 |
gyrus | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
cerebral cortex | 1.11e-08 | 25 |
pallium | 1.11e-08 | 25 |
pre-chordal neural plate | 4.61e-08 | 61 |
adult organism | 8.86e-08 | 114 |
regional part of telencephalon | 4.74e-07 | 32 |