FFCP PHASE1:Hg19::chr1:1357098..1357110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1357098..1357110,+ | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_at_chr1:1357098..1357110,+ | |description=CAGE_peak_at_chr1:1357098..1357110,+ | ||
|id=chr1:1357098..1357110,+ | |id=chr1:1357098..1357110,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.16e-10!7;CL:0000586!7.16e-10!7;CL:0002535!1.10e-09!2;CL:0000080!1.21e-07!6 | |ontology_enrichment_celltype=CL:0000039!7.16e-10!7;CL:0000586!7.16e-10!7;CL:0002535!1.10e-09!2;CL:0000080!1.21e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.42e-08!143;DOID:4362!1.70e-08!5;DOID:305!3.52e-08!106;DOID:1749!9.54e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3905;6.16e-12;9!DOID:4556;1.53e-09;3!DOID:1324;1.54e-07;15!DOID:5409;1.80e-07;4!DOID:0050615;4.02e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3905,5.83e-12,9;DOID:4556,1.54e-09,3;DOID:1324,1.49e-07,15;DOID:5409,1.69e-07,4;DOID:0050615,3.90e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0006955!1.10e-09!2;UBERON:0004801!1.10e-09!2;UBERON:0000344!4.23e-09!12;UBERON:0003729!1.21e-08!5;UBERON:0000002!3.81e-07!6;UBERON:0001560!3.81e-07!6;UBERON:0003133!5.10e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.13e-23;10!UBERON:0000178;1.31e-15;15!UBERON:0000179;1.31e-15;15!UBERON:0000463;1.31e-15;15!UBERON:0000478;5.07e-10;24!UBERON:0002390;9.48e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.42e-23,10;UBERON:0000358,4.42e-23,10;UBERON:0000307,4.42e-23,10;UBERON:0000091,4.42e-23,10;UBERON:0000087,4.42e-23,10;UBERON:0007010,4.42e-23,10;UBERON:0007806,4.42e-23,10;UBERON:0008780,4.42e-23,10;UBERON:0005728,4.42e-23,10;UBERON:0000178,1.18e-15,15;UBERON:0000179,1.18e-15,15;UBERON:0000463,1.18e-15,15;UBERON:0000478,4.77e-10,24 | |||
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| ||
|short_description=p@chr1:1357098..1357110,+ | |short_description=p@chr1:1357098..1357110,+ | ||
}} | }} |
Latest revision as of 20:34, 27 July 2015
Short description: | p@chr1:1357098..1357110, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1357098..1357110, + |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.42e-23 | 10 |
blastocyst | 4.42e-23 | 10 |
blastula | 4.42e-23 | 10 |
bilaminar disc | 4.42e-23 | 10 |
inner cell mass | 4.42e-23 | 10 |
cleaving embryo | 4.42e-23 | 10 |
connecting stalk | 4.42e-23 | 10 |
inner cell mass derived epiblast | 4.42e-23 | 10 |
extraembryonic mesoderm | 4.42e-23 | 10 |
blood | 1.18e-15 | 15 |
haemolymphatic fluid | 1.18e-15 | 15 |
organism substance | 1.18e-15 | 15 |
extraembryonic structure | 4.77e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
lung carcinoma | 5.83e-12 | 9 |
lung large cell carcinoma | 1.54e-09 | 3 |
lung cancer | 1.49e-07 | 15 |
lung small cell carcinoma | 1.69e-07 | 4 |
respiratory system cancer | 3.90e-07 | 16 |