FFCP PHASE1:Hg19::chr14:99947168..99947232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84193 | |EntrezGene=84193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20493 | |HGNC=20493 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TU7,C9K0W5,A0PJU3 | |UniProt=Q86TU7,C9K0W5,A0PJU3 | ||
|association_with_transcript=0bp_to_ENST00000331768,ENST00000357563,ENST00000453764,NM_032233,NM_199123,uc001ygc.2,uc001ygd.2,uc001ygf.2_5end | |association_with_transcript=0bp_to_ENST00000331768,ENST00000357563,ENST00000453764,NM_032233,NM_199123,uc001ygc.2,uc001ygd.2,uc001ygf.2_5end | ||
|cluster_id=chr14:99947168..99947232,- | |||
|description=CAGE_peak_1_at_SETD3_5end | |description=CAGE_peak_1_at_SETD3_5end | ||
|id=chr14:99947168..99947232,- | |id=chr14:99947168..99947232,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.34e-28!115;UBERON:0001049!1.44e-11!57;UBERON:0005068!1.44e-11!57;UBERON:0006241!1.44e-11!57;UBERON:0007135!1.44e-11!57;UBERON:0002616!9.46e-11!59;UBERON:0003080!1.92e-10!42;UBERON:0001017!4.56e-10!82;UBERON:0002780!4.91e-10!41;UBERON:0001890!4.91e-10!41;UBERON:0006240!4.91e-10!41;UBERON:0000073!4.93e-10!94;UBERON:0001016!4.93e-10!94;UBERON:0000955!1.00e-09!69;UBERON:0006238!1.00e-09!69;UBERON:0005743!1.26e-09!86;UBERON:0002020!9.01e-09!34;UBERON:0003528!9.01e-09!34;UBERON:0001893!1.16e-08!34;UBERON:0002791!2.58e-08!33;UBERON:0001869!5.70e-08!32;UBERON:0003075!7.96e-07!86;UBERON:0007284!7.96e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!6.34e-28!115;UBERON:0001049!1.44e-11!57;UBERON:0005068!1.44e-11!57;UBERON:0006241!1.44e-11!57;UBERON:0007135!1.44e-11!57;UBERON:0002616!9.46e-11!59;UBERON:0003080!1.92e-10!42;UBERON:0001017!4.56e-10!82;UBERON:0002780!4.91e-10!41;UBERON:0001890!4.91e-10!41;UBERON:0006240!4.91e-10!41;UBERON:0000073!4.93e-10!94;UBERON:0001016!4.93e-10!94;UBERON:0000955!1.00e-09!69;UBERON:0006238!1.00e-09!69;UBERON:0005743!1.26e-09!86;UBERON:0002020!9.01e-09!34;UBERON:0003528!9.01e-09!34;UBERON:0001893!1.16e-08!34;UBERON:0002791!2.58e-08!33;UBERON:0001869!5.70e-08!32;UBERON:0003075!7.96e-07!86;UBERON:0007284!7.96e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.64e-08;114!UBERON:0002780;9.67e-08;41!UBERON:0001890;9.67e-08;41!UBERON:0001893;1.92e-07;34!UBERON:0003528;1.92e-07;34!UBERON:0002020;1.92e-07;34!UBERON:0001869;3.56e-07;32!UBERON:0002791;4.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.32e-27,114;UBERON:0001049,3.56e-11,56;UBERON:0005068,3.56e-11,56;UBERON:0006241,3.56e-11,56;UBERON:0007135,3.56e-11,56;UBERON:0001016,4.10e-10,89;UBERON:0002780,4.91e-10,41;UBERON:0001890,4.91e-10,41;UBERON:0003080,4.91e-10,41;UBERON:0006240,4.91e-10,41;UBERON:0000073,6.26e-10,53;UBERON:0002616,6.26e-10,53;UBERON:0001017,9.98e-10,81;UBERON:0000955,2.25e-09,68;UBERON:0006238,2.25e-09,68;UBERON:0003528,9.01e-09,34;UBERON:0002020,9.01e-09,34;UBERON:0001893,1.16e-08,34;UBERON:0001869,5.70e-08,32;UBERON:0002791,6.61e-08,32 | |||
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| ||
|short_description=p1@SETD3 | |short_description=p1@SETD3 | ||
}} | }} |
Latest revision as of 21:27, 16 September 2015
Short description: | p1@SETD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SETD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331768, ENST00000357563, ENST00000453764, NM_032233, NM_199123, uc001ygc.2, uc001ygd.2, uc001ygf.2_5end |
EntrezGene: | SETD3 |
HGNC: | 20493 |
UniProt: | Q86TU7C9K0W5A0PJU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.32e-27 | 114 |
neural tube | 3.56e-11 | 56 |
neural rod | 3.56e-11 | 56 |
future spinal cord | 3.56e-11 | 56 |
neural keel | 3.56e-11 | 56 |
nervous system | 4.10e-10 | 89 |
regional part of forebrain | 4.91e-10 | 41 |
forebrain | 4.91e-10 | 41 |
anterior neural tube | 4.91e-10 | 41 |
future forebrain | 4.91e-10 | 41 |
regional part of nervous system | 6.26e-10 | 53 |
regional part of brain | 6.26e-10 | 53 |
central nervous system | 9.98e-10 | 81 |
brain | 2.25e-09 | 68 |
future brain | 2.25e-09 | 68 |
brain grey matter | 9.01e-09 | 34 |
gray matter | 9.01e-09 | 34 |
telencephalon | 1.16e-08 | 34 |
cerebral hemisphere | 5.70e-08 | 32 |
regional part of telencephalon | 6.61e-08 | 32 |