FFCP PHASE1:Hg19::chr11:47429543..47429559,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:47429543..47429559,-
|short_description=p@chr11:47429543..47429559,-
|description=CAGE_peak_at_chr11:47429543..47429559,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:47429543..47429559,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:47429543..47429559,- | |||
|id=chr11:47429543..47429559,- | |||
|ontology_enrichment_celltype=CL:0002057!2.04e-115!42;CL:0000860!5.15e-107!45;CL:0000766!1.64e-90!76;CL:0002009!2.60e-73!65;CL:0000557!3.31e-73!71;CL:0002194!4.24e-72!63;CL:0000576!4.24e-72!63;CL:0000040!4.24e-72!63;CL:0000559!4.24e-72!63;CL:0000839!9.06e-71!70;CL:0000763!4.17e-63!112;CL:0000049!4.17e-63!112;CL:0000738!1.14e-59!140;CL:0000037!2.84e-46!172;CL:0000566!2.84e-46!172;CL:0000988!4.80e-43!182;CL:0002032!1.18e-42!165;CL:0000837!1.18e-42!165;CL:0002087!9.56e-42!119;CL:0002031!1.89e-41!124;CL:0000094!4.73e-19!8;CL:0000134!1.92e-17!358;CL:0002320!7.36e-17!365;CL:0002393!7.41e-17!9;CL:0002397!7.41e-17!9;CL:0000219!8.42e-15!390;CL:0000081!1.47e-13!11;CL:0000048!2.43e-12!430;CL:0000034!2.65e-12!444;CL:0000723!5.44e-12!436;CL:0000767!3.00e-10!3;CL:0000771!8.97e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-95;33!CL:0002057;2.06e-95;33!CL:0000473;3.65e-63;39!CL:0000234;3.65e-63;39!CL:0000576;3.21e-60;48!CL:0000766;1.44e-42;69!CL:0000094;2.18e-21;8!CL:0002393;4.95e-21;6!CL:0002397;4.95e-21;6!CL:0000763;1.27e-20;100!CL:0002087;9.56e-18;104!CL:0000081;2.08e-15;11!CL:0000767;8.84e-15;3!CL:0000738;1.62e-12;136!CL:0000771;5.25e-11;2!CL:0000226;3.13e-07;3!CL:0000842;3.13e-07;3!CL:0000988;4.11e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-114,42;CL:0002057,1.56e-114,42;CL:0000473,2.16e-99,48;CL:0000234,2.16e-99,48;CL:0000766,6.42e-91,72;CL:0002194,3.46e-78,59;CL:0000576,3.46e-78,59;CL:0000040,3.46e-78,59;CL:0000559,3.46e-78,59;CL:0002009,1.89e-75,61;CL:0000839,2.54e-69,66;CL:0000557,3.33e-68,67;CL:0000763,1.54e-58,108;CL:0000049,1.54e-58,108;CL:0000738,1.23e-50,136;CL:0002087,1.36e-42,115;CL:0000037,1.15e-39,168;CL:0000988,2.73e-37,177;CL:0002032,5.07e-37,161;CL:0000837,5.07e-37,161;CL:0002031,2.22e-35,120;CL:0000094,1.79e-21,8;CL:0000081,1.80e-15,11;CL:0000134,5.85e-15,354;CL:0000767,7.48e-15,3;CL:0002320,1.60e-14,361;CL:0002393,7.31e-14,9;CL:0002397,7.31e-14,9;CL:0000219,5.56e-13,386;CL:0000034,2.25e-11,441;CL:0000048,4.29e-11,427;CL:0000771,4.52e-11,2;CL:0000723,7.83e-11,433;CL:0000226,1.99e-07,3;CL:0000842,1.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.64e-85;42!CL:0000049;5.87e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.71e-64!80;UBERON:0001474!1.13e-58!86;UBERON:0002390!3.79e-53!102;UBERON:0003061!3.79e-53!102;UBERON:0004765!6.91e-51!101;UBERON:0001434!6.91e-51!101;UBERON:0002193!1.96e-47!112;UBERON:0002405!3.07e-41!115;UBERON:0002204!1.64e-26!167;UBERON:0003081!1.37e-21!216;UBERON:0002384!6.00e-17!375;UBERON:0000926!3.07e-07!448;UBERON:0004120!3.07e-07!448;UBERON:0006603!3.07e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.89e-59,76;UBERON:0001474,1.14e-54,82;UBERON:0002390,4.22e-51,98;UBERON:0003061,4.22e-51,98;UBERON:0004765,2.85e-49,90;UBERON:0002405,1.75e-47,93;UBERON:0002193,8.93e-46,108;UBERON:0001434,1.00e-43,100;UBERON:0002204,1.41e-23,167;UBERON:0003081,3.46e-21,203;UBERON:0002384,6.32e-14,371;UBERON:0000926,3.71e-11,315;UBERON:0004120,3.71e-11,315;UBERON:0006603,3.71e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,1.39334510984468,0,0,0,0,0,0,7.75593571944628,7.2196001089251,7.59538047505481,0,0,0,1.01778767145695,1.13362783106643,0.970336244751265,2.55671940596253,1.23350366406548,1.54853185447552,4.89077066947656,4.61089271752381,4.49316236788312,5.86067657252252,3.87290810150296,9.47985406160392,1.12945403725563,1.91034305040492,1.34834090667051,4.89734227793444,5.45579346029359,5.11469700639233,0.329851300186716,1.39624560335142,0.852449501065388,10.7377418292576,2.26954089876456,2.4912889959823,1.7587406567972,1.0429658368404,2.38907729175628,4.23779651843358,5.52416453981347,4.74693581161327,1.05627643155971,1.27562579979026,0.419317291016752,0.673971786878971,0.600707571366025,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94142780736755,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,1.39334510984468,0,0,0,0,0,0,7.75593571944628,7.2196001089251,7.59538047505481,0,0,0,1.01778767145695,1.13362783106643,0.970336244751265,2.55671940596253,1.23350366406548,1.54853185447552,4.89077066947656,4.61089271752381,4.49316236788312,5.86067657252252,3.87290810150296,9.47985406160392,1.12945403725563,1.91034305040492,1.34834090667051,4.89734227793444,5.45579346029359,5.11469700639233,0.329851300186716,1.39624560335142,0.852449501065388,10.7377418292576,2.26954089876456,2.4912889959823,1.7587406567972,1.0429658368404,2.38907729175628,4.23779651843358,5.52416453981347,4.74693581161327,1.05627643155971,1.27562579979026,0.419317291016752,0.673971786878971,0.600707571366025,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94142780736755,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:47429543..47429559,- | |||
}} | }} |
Latest revision as of 22:39, 23 July 2015
Short description: | p@chr11:47429543..47429559, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:47429543..47429559, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.89e-59 | 76 |
bone element | 1.14e-54 | 82 |
hematopoietic system | 4.22e-51 | 98 |
blood island | 4.22e-51 | 98 |
skeletal element | 2.85e-49 | 90 |
immune system | 1.75e-47 | 93 |
hemolymphoid system | 8.93e-46 | 108 |
skeletal system | 1.00e-43 | 100 |
musculoskeletal system | 1.41e-23 | 167 |
lateral plate mesoderm | 3.46e-21 | 203 |
connective tissue | 6.32e-14 | 371 |
mesoderm | 3.71e-11 | 315 |
mesoderm-derived structure | 3.71e-11 | 315 |
presumptive mesoderm | 3.71e-11 | 315 |