FFCP PHASE1:Hg19::chr11:64511738..64511759,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:64511738..64511759,+
|short_description=p@chr11:64511738..64511759,+
|description=CAGE_peak_at_chr11:64511738..64511759,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:64511738..64511759,+ | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_at_chr11:64511738..64511759,+ | |||
|id=chr11:64511738..64511759,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.64e-38!172;CL:0000566!1.64e-38!172;CL:0000988!3.49e-35!182;CL:0002032!7.32e-34!165;CL:0000837!7.32e-34!165;CL:0000738!4.80e-33!140;CL:0002087!9.63e-33!119;CL:0000838!8.76e-29!52;CL:0000542!4.90e-28!53;CL:0000051!4.90e-28!53;CL:0002031!1.04e-27!124;CL:0000791!1.23e-22!18;CL:0000789!1.23e-22!18;CL:0002420!1.23e-22!18;CL:0002419!1.23e-22!18;CL:0000790!1.23e-22!18;CL:0000084!9.56e-19!25;CL:0000827!9.56e-19!25;CL:0000236!1.61e-14!14;CL:0000625!6.75e-12!11;CL:0000624!1.02e-11!6;CL:0002393!2.60e-11!9;CL:0002397!2.60e-11!9;CL:0000763!9.72e-11!112;CL:0000049!9.72e-11!112;CL:0002057!4.71e-09!42;CL:0000945!1.74e-08!24;CL:0000826!1.74e-08!24;CL:0000860!3.91e-08!45;CL:0000766!3.95e-08!76;CL:0000134!5.54e-08!358;CL:0002320!1.70e-07!365;CL:0000898!6.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.31e-26;13!CL:0000791;1.52e-22;18!CL:0000789;1.52e-22;18!CL:0002419;1.52e-22;18!CL:0000542;3.50e-19;53!CL:0000624;3.86e-16;6!CL:0000084;1.44e-15;25!CL:0000945;2.40e-13;24!CL:0000898;2.23e-12;3!CL:0000226;1.56e-11;3!CL:0000842;1.56e-11;3!CL:0000625;5.01e-11;11!CL:0000815;1.28e-08;2!CL:0000792;1.28e-08;2!CL:0002677;1.28e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.53e-31,52;CL:0000542,7.80e-31,53;CL:0000051,7.80e-31,53;CL:0000236,1.48e-24,14;CL:0000791,1.05e-22,18;CL:0000789,1.05e-22,18;CL:0002420,1.05e-22,18;CL:0002419,1.05e-22,18;CL:0000790,1.05e-22,18;CL:0000738,8.11e-21,136;CL:0002087,9.40e-21,115;CL:0000037,8.98e-18,168;CL:0000988,1.89e-16,177;CL:0000624,3.37e-16,6;CL:0000084,1.11e-15,25;CL:0000827,1.11e-15,25;CL:0002031,3.43e-15,120;CL:0000945,1.80e-13,24;CL:0000826,1.80e-13,24;CL:0002032,8.37e-13,161;CL:0000837,8.37e-13,161;CL:0000898,1.62e-12,3;CL:0000226,2.17e-11,3;CL:0000842,2.17e-11,3;CL:0000625,3.95e-11,11;CL:0000815,9.16e-09,2;CL:0000792,9.16e-09,2;CL:0002677,9.16e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-22;18!CL:0000051;3.50e-19;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-15!102;UBERON:0003061!1.33e-15!102;UBERON:0002193!4.59e-15!112;UBERON:0000178!3.47e-13!15;UBERON:0000179!3.47e-13!15;UBERON:0000463!3.47e-13!15;UBERON:0004177!2.86e-07!7;UBERON:0002384!7.66e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.97e-22;15!UBERON:0000179;1.97e-22;15!UBERON:0000463;1.97e-22;15!UBERON:0002390;8.03e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.01e-22,15;UBERON:0000179,2.01e-22,15;UBERON:0000463,2.01e-22,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0.200544447470142,0.868043482863407,0,0.647787332037959,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,1.05627643155971,0.850417199860174,1.04829322754188,0.898629049171961,0.300353785683013,0.16072558669708,2.85012743741249,2.78483348078726,0.182664153764634,0,3.27683166757279,1.77901850772711,8.10787422876364,4.00395987036012,2.29900975981793,1.98313461835459,4.77026877267682,1.1384259382189,1.76171156811282,1.52909291250092,1.32171328579026,2.24203425192614,0,0.786839080455332,3.14408610199332,3.08402248499264,1.00311897234407,3.91106719960308,6.62826928028627,7.79306913631645,0.222820913770347,2.94605907474837,2.21533894583621,1.62482318259009,0.640456598628376,0.650296737799391,0.493313713811028,1.38175008892924,1.15921234294021,6.67289534229272,5.88589821797369,4.18142095219907,0.679856056185397,8.04763036564035,7.90343124610049,3.28925599625354,1.91139248594458,2.60433381542567,0,1.80690142893327,2.04778577847069,1.24930726552346,0.947109008176067,0,0.201606743224732,1.33720097891754,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,1.57624608161542,0.862510299438069,1.15508732651774,0,0,0,0,0,4.49404214368309,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.80428461064202,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,3.41788312304498,2.38231775457789,2.46817363851717,2.59389324477087,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0.159426272728822,0.997896857164083,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.481764225311099,1.21079824314629,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr11:64511738..64511759,+ | |||
}} | }} |
Latest revision as of 00:18, 24 July 2015
Short description: | p@chr11:64511738..64511759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64511738..64511759, + |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.53e-31 | 52 |
lymphocyte | 7.80e-31 | 53 |
common lymphoid progenitor | 7.80e-31 | 53 |
B cell | 1.48e-24 | 14 |
mature alpha-beta T cell | 1.05e-22 | 18 |
alpha-beta T cell | 1.05e-22 | 18 |
immature T cell | 1.05e-22 | 18 |
mature T cell | 1.05e-22 | 18 |
immature alpha-beta T cell | 1.05e-22 | 18 |
leukocyte | 8.11e-21 | 136 |
nongranular leukocyte | 9.40e-21 | 115 |
hematopoietic stem cell | 8.98e-18 | 168 |
hematopoietic cell | 1.89e-16 | 177 |
CD4-positive, alpha-beta T cell | 3.37e-16 | 6 |
T cell | 1.11e-15 | 25 |
pro-T cell | 1.11e-15 | 25 |
hematopoietic lineage restricted progenitor cell | 3.43e-15 | 120 |
lymphocyte of B lineage | 1.80e-13 | 24 |
pro-B cell | 1.80e-13 | 24 |
hematopoietic oligopotent progenitor cell | 8.37e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.37e-13 | 161 |
naive T cell | 1.62e-12 | 3 |
single nucleate cell | 2.17e-11 | 3 |
mononuclear cell | 2.17e-11 | 3 |
CD8-positive, alpha-beta T cell | 3.95e-11 | 11 |
regulatory T cell | 9.16e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.16e-09 | 2 |
naive regulatory T cell | 9.16e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.01e-22 | 15 |
haemolymphatic fluid | 2.01e-22 | 15 |
organism substance | 2.01e-22 | 15 |