FFCP PHASE1:Hg19::chr11:64570624..64570697,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64570624..64570697,-
|short_description=p1@MAP4K2
|description=CAGE_peak_1_at_MAP4K2_5end
|association_with_transcript=0bp_to_ENST00000435926,ENST00000439...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5871 | |EntrezGene=5871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6864 | |HGNC=6864 | ||
|UniProt=F2Z2B3, | |TSSclassifier=strong | ||
|UniProt=F2Z2B3,C9JCU6 | |||
|association_with_transcript=0bp_to_ENST00000435926,ENST00000439069_5end | |||
|cluster_id=chr11:64570624..64570697,- | |||
|description=CAGE_peak_1_at_MAP4K2_5end | |||
|id=chr11:64570624..64570697,- | |||
|ontology_enrichment_celltype=CL:0000542!1.26e-19!53;CL:0000051!1.26e-19!53;CL:0000838!4.02e-19!52;CL:0002087!3.31e-12!119;CL:0000988!3.32e-12!182;CL:0000037!2.88e-11!172;CL:0000566!2.88e-11!172;CL:0000738!5.36e-11!140;CL:0000945!4.41e-10!24;CL:0000826!4.41e-10!24;CL:0002032!6.32e-10!165;CL:0000837!6.32e-10!165;CL:0000115!1.51e-09!35;CL:0000084!4.73e-09!25;CL:0000827!4.73e-09!25;CL:0000791!5.31e-09!18;CL:0000789!5.31e-09!18;CL:0002420!5.31e-09!18;CL:0002419!5.31e-09!18;CL:0000790!5.31e-09!18;CL:0002139!3.32e-08!24;CL:0000071!4.39e-08!18;CL:0002546!4.39e-08!18;CL:0000236!1.93e-07!14;CL:0002031!2.86e-07!124;CL:0002078!3.06e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.32e-11;53!CL:0000945;4.71e-10;24!CL:0000084;3.84e-09;25!CL:0000791;5.41e-09;18!CL:0000789;5.41e-09;18!CL:0002419;5.41e-09;18!CL:0000115;3.32e-08;36!CL:0002139;4.04e-08;24!CL:0000071;6.27e-08;18!CL:0000236;4.62e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.26e-19,53;CL:0000051,1.26e-19,53;CL:0000838,4.02e-19,52;CL:0002087,1.74e-12,115;CL:0000988,5.52e-12,177;CL:0000037,2.04e-11,168;CL:0000738,3.40e-11,136;CL:0000945,4.41e-10,24;CL:0000826,4.41e-10,24;CL:0000115,4.42e-10,36;CL:0002032,4.62e-10,161;CL:0000837,4.62e-10,161;CL:0000084,4.73e-09,25;CL:0000827,4.73e-09,25;CL:0000791,5.31e-09,18;CL:0000789,5.31e-09,18;CL:0002420,5.31e-09,18;CL:0002419,5.31e-09,18;CL:0000790,5.31e-09,18;CL:0002139,3.32e-08,24;CL:0000071,4.39e-08,18;CL:0002546,4.39e-08,18;CL:0002078,1.08e-07,45;CL:0000236,1.93e-07,14;CL:0002031,2.09e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.32e-11;53!CL:0000790;5.41e-09;18!CL:0002546;6.27e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.39e-08!18;UBERON:0004638!4.39e-08!18;UBERON:0004852!4.39e-08!18;UBERON:0000178!1.56e-07!15;UBERON:0000179!1.56e-07!15;UBERON:0000463!1.56e-07!15;UBERON:0001049!4.32e-07!57;UBERON:0005068!4.32e-07!57;UBERON:0006241!4.32e-07!57;UBERON:0007135!4.32e-07!57;UBERON:0002616!7.49e-07!59;UBERON:0000955!9.69e-07!69;UBERON:0006238!9.69e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.27e-08;18!UBERON:0001986;6.27e-08;18!UBERON:0004852;6.27e-08;18!UBERON:0000178;1.58e-07;15!UBERON:0000179;1.58e-07;15!UBERON:0000463;1.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.39e-08,18;UBERON:0001986,4.39e-08,18;UBERON:0004852,4.39e-08,18;UBERON:0000178,1.56e-07,15;UBERON:0000179,1.56e-07,15;UBERON:0000463,1.56e-07,15;UBERON:0001049,6.97e-07,56;UBERON:0005068,6.97e-07,56;UBERON:0006241,6.97e-07,56;UBERON:0007135,6.97e-07,56 | |||
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| ||
|short_description=p1@MAP4K2 | |||
}} | }} |
Latest revision as of 04:42, 19 September 2015
Short description: | p1@MAP4K2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP4K2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435926, ENST00000439069_5end |
EntrezGene: | MAP4K2 |
HGNC: | 6864 |
UniProt: | F2Z2B3C9JCU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.26e-19 | 53 |
common lymphoid progenitor | 1.26e-19 | 53 |
lymphoid lineage restricted progenitor cell | 4.02e-19 | 52 |
nongranular leukocyte | 1.74e-12 | 115 |
hematopoietic cell | 5.52e-12 | 177 |
hematopoietic stem cell | 2.04e-11 | 168 |
leukocyte | 3.40e-11 | 136 |
lymphocyte of B lineage | 4.41e-10 | 24 |
pro-B cell | 4.41e-10 | 24 |
endothelial cell | 4.42e-10 | 36 |
hematopoietic oligopotent progenitor cell | 4.62e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.62e-10 | 161 |
T cell | 4.73e-09 | 25 |
pro-T cell | 4.73e-09 | 25 |
mature alpha-beta T cell | 5.31e-09 | 18 |
alpha-beta T cell | 5.31e-09 | 18 |
immature T cell | 5.31e-09 | 18 |
mature T cell | 5.31e-09 | 18 |
immature alpha-beta T cell | 5.31e-09 | 18 |
endothelial cell of vascular tree | 3.32e-08 | 24 |
blood vessel endothelial cell | 4.39e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.39e-08 | 18 |
meso-epithelial cell | 1.08e-07 | 45 |
B cell | 1.93e-07 | 14 |
hematopoietic lineage restricted progenitor cell | 2.09e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 4.39e-08 | 18 |
endothelium | 4.39e-08 | 18 |
cardiovascular system endothelium | 4.39e-08 | 18 |
blood | 1.56e-07 | 15 |
haemolymphatic fluid | 1.56e-07 | 15 |
organism substance | 1.56e-07 | 15 |
neural tube | 6.97e-07 | 56 |
neural rod | 6.97e-07 | 56 |
future spinal cord | 6.97e-07 | 56 |
neural keel | 6.97e-07 | 56 |