FFCP PHASE1:Hg19::chr16:4366053..4366076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=84662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
| | |cluster_id=chr16:4366053..4366076,+ | ||
|description=CAGE_peak_26_at_GLIS2_5end | |||
|id=chr16:4366053..4366076,+ | |id=chr16:4366053..4366076,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.12e-18!180;CL:0000057!9.59e-14!75;CL:0000222!2.26e-08!119;CL:0000220!1.41e-07!246;CL:0002321!1.79e-07!248;CL:0000183!2.23e-07!59;CL:0000499!4.54e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.12e-18!180;CL:0000057!9.59e-14!75;CL:0000222!2.26e-08!119;CL:0000220!1.41e-07!246;CL:0002321!1.79e-07!248;CL:0000183!2.23e-07!59;CL:0000499!4.54e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000499;3.60e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.56e-14,76;CL:0000222,8.42e-09,121;CL:0002321,1.30e-07,250;CL:0000499,3.14e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!4.88e-23!347;UBERON:0000475!7.15e-22!365;UBERON:0002100!5.37e-21!216;UBERON:0003104!1.33e-17!238;UBERON:0009142!1.33e-17!238;UBERON:0000468!5.80e-16!659;UBERON:0000483!4.85e-15!309;UBERON:0000119!7.28e-15!312;UBERON:0005256!3.53e-13!143;UBERON:0000477!9.60e-13!286;UBERON:0009569!4.12e-12!113;UBERON:0000467!5.72e-12!625;UBERON:0000480!1.00e-11!626;UBERON:0000064!5.85e-10!219;UBERON:0003103!6.51e-10!69;UBERON:0000922!8.58e-10!612;UBERON:0001048!1.00e-09!168;UBERON:0003914!1.05e-09!118;UBERON:0004111!1.98e-09!241;UBERON:0002050!2.25e-09!605;UBERON:0005423!2.25e-09!605;UBERON:0000923!3.14e-09!604;UBERON:0005291!3.14e-09!604;UBERON:0006598!3.14e-09!604;UBERON:0002532!3.14e-09!604;UBERON:0000464!3.18e-09!104;UBERON:0000062!4.74e-09!511;UBERON:0000466!7.49e-09!126;UBERON:0005177!1.50e-08!107;UBERON:0001008!5.76e-08!45;UBERON:0000914!7.86e-08!83;UBERON:0002329!7.86e-08!83;UBERON:0003077!7.86e-08!83;UBERON:0003059!7.86e-08!83;UBERON:0007282!7.86e-08!83;UBERON:0009618!7.86e-08!83;UBERON:0007285!7.86e-08!83;UBERON:0000025!9.21e-08!194;UBERON:0006554!1.27e-07!44;UBERON:0003064!1.34e-07!37;UBERON:0004923!4.81e-07!57;UBERON:0003886!5.40e-07!63;UBERON:0000915!8.66e-07!52;UBERON:0000490!9.09e-07!138;UBERON:0004119!9.69e-07!169;UBERON:0000925!9.69e-07!169;UBERON:0006595!9.69e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.89e-18,199;UBERON:0003104,1.64e-16,160;UBERON:0009142,1.64e-16,160;UBERON:0000483,1.87e-14,306;UBERON:0000119,2.79e-14,309;UBERON:0009569,1.58e-11,112;UBERON:0005256,1.05e-09,122;UBERON:0003103,2.03e-09,68;UBERON:0003914,3.07e-09,117;UBERON:0001048,3.45e-09,160;UBERON:0004111,3.58e-09,240;UBERON:0001008,6.37e-08,48;UBERON:0007503,9.54e-08,78;UBERON:0006554,1.39e-07,47;UBERON:0005177,1.60e-07,101;UBERON:0000490,1.78e-07,148;UBERON:0004923,2.23e-07,66;UBERON:0000922,2.45e-07,592;UBERON:0000025,2.84e-07,192;UBERON:0007524,4.48e-07,73;UBERON:0000486,5.82e-07,83;UBERON:0000915,6.08e-07,52;UBERON:0002329,7.30e-07,71;UBERON:0003059,7.30e-07,71;UBERON:0007282,7.30e-07,71;UBERON:0004290,7.30e-07,71;UBERON:0009618,7.30e-07,71;UBERON:0003077,9.91e-07,72;UBERON:0007285,9.91e-07,72 | |||
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| ||
|short_description= | |short_description=p26@GLIS2 | ||
}} | }} |
Latest revision as of 16:12, 16 September 2015
Short description: | p26@GLIS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_GLIS2_5end |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | GLIS2 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.56e-14 | 76 |
mesodermal cell | 8.42e-09 | 121 |
embryonic cell | 1.30e-07 | 250 |
stromal cell | 3.14e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.89e-18 | 199 |
mesenchyme | 1.64e-16 | 160 |
entire embryonic mesenchyme | 1.64e-16 | 160 |
epithelium | 1.87e-14 | 306 |
cell layer | 2.79e-14 | 309 |
subdivision of trunk | 1.58e-11 | 112 |
trunk mesenchyme | 1.05e-09 | 122 |
compound organ | 2.03e-09 | 68 |
epithelial tube | 3.07e-09 | 117 |
primordium | 3.45e-09 | 160 |
anatomical conduit | 3.58e-09 | 240 |
renal system | 6.37e-08 | 48 |
epithelial vesicle | 9.54e-08 | 78 |
urinary system structure | 1.39e-07 | 47 |
trunk region element | 1.60e-07 | 101 |
unilaminar epithelium | 1.78e-07 | 148 |
organ component layer | 2.23e-07 | 66 |
embryo | 2.45e-07 | 592 |
tube | 2.84e-07 | 192 |
dense mesenchyme tissue | 4.48e-07 | 73 |
multilaminar epithelium | 5.82e-07 | 83 |
thoracic segment of trunk | 6.08e-07 | 52 |
somite | 7.30e-07 | 71 |
presomitic mesoderm | 7.30e-07 | 71 |
presumptive segmental plate | 7.30e-07 | 71 |
dermomyotome | 7.30e-07 | 71 |
trunk paraxial mesoderm | 7.30e-07 | 71 |
paraxial mesoderm | 9.91e-07 | 72 |
presumptive paraxial mesoderm | 9.91e-07 | 72 |