FFCP PHASE1:Hg19::chr1:85461941..85461949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:85461941..85461949,+ | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_at_chr1:85461941..85461949,+ | |description=CAGE_peak_at_chr1:85461941..85461949,+ | ||
|id=chr1:85461941..85461949,+ | |id=chr1:85461941..85461949,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.18e-31!42;CL:0000860!4.04e-29!45;CL:0002009!1.06e-28!65;CL:0000557!4.87e-26!71;CL:0000738!3.81e-25!140;CL:0002031!6.30e-24!124;CL:0002194!1.04e-22!63;CL:0000576!1.04e-22!63;CL:0000040!1.04e-22!63;CL:0000559!1.04e-22!63;CL:0002087!1.92e-22!119;CL:0000988!3.78e-22!182;CL:0000839!3.46e-20!70;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002032!7.95e-19!165;CL:0000837!7.95e-19!165;CL:0000766!2.17e-18!76;CL:0000763!2.04e-17!112;CL:0000049!2.04e-17!112;CL:0001014!4.79e-16!2;CL:0001016!4.79e-16!2;CL:0000453!9.39e-14!5;CL:0000080!5.95e-11!6;CL:0000990!7.41e-08!8;CL:0000134!3.22e-07!358;CL:0002320!5.39e-07!365 | |ontology_enrichment_celltype=CL:0002057!2.18e-31!42;CL:0000860!4.04e-29!45;CL:0002009!1.06e-28!65;CL:0000557!4.87e-26!71;CL:0000738!3.81e-25!140;CL:0002031!6.30e-24!124;CL:0002194!1.04e-22!63;CL:0000576!1.04e-22!63;CL:0000040!1.04e-22!63;CL:0000559!1.04e-22!63;CL:0002087!1.92e-22!119;CL:0000988!3.78e-22!182;CL:0000839!3.46e-20!70;CL:0000037!1.04e-19!172;CL:0000566!1.04e-19!172;CL:0002032!7.95e-19!165;CL:0000837!7.95e-19!165;CL:0000766!2.17e-18!76;CL:0000763!2.04e-17!112;CL:0000049!2.04e-17!112;CL:0001014!4.79e-16!2;CL:0001016!4.79e-16!2;CL:0000453!9.39e-14!5;CL:0000080!5.95e-11!6;CL:0000990!7.41e-08!8;CL:0000134!3.22e-07!358;CL:0002320!5.39e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-44;33!CL:0002057;1.14e-44;33!CL:0000473;4.29e-33;39!CL:0000234;4.29e-33;39!CL:0001014;8.04e-30;2!CL:0001016;8.04e-30;2!CL:0000576;2.59e-18;48!CL:0000766;8.44e-15;69!CL:0000453;1.50e-12;5!CL:0000840;1.30e-10;5!CL:0002087;1.28e-09;104!CL:0000763;1.98e-08;100!CL:0000990;2.29e-07;8!CL:0000738;2.90e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-39,42;CL:0002057,1.32e-39,42;CL:0002009,2.20e-37,61;CL:0000473,1.54e-34,48;CL:0000234,1.54e-34,48;CL:0000557,5.44e-34,67;CL:0001014,9.31e-30,2;CL:0001016,9.31e-30,2;CL:0002194,1.95e-27,59;CL:0000576,1.95e-27,59;CL:0000040,1.95e-27,59;CL:0000559,1.95e-27,59;CL:0000839,1.83e-24,66;CL:0000766,2.28e-22,72;CL:0000763,9.04e-21,108;CL:0000049,9.04e-21,108;CL:0002031,1.37e-18,120;CL:0000738,2.86e-16,136;CL:0002087,1.15e-13,115;CL:0002032,1.47e-13,161;CL:0000837,1.47e-13,161;CL:0000037,6.11e-13,168;CL:0000453,1.59e-12,5;CL:0000988,3.22e-12,177;CL:0000840,1.36e-10,5;CL:0001029,1.36e-10,5;CL:0000990,2.36e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.99e-25;42 | |||
|ontology_enrichment_disease=DOID:0060060!2.64e-08!1;DOID:0060061!2.64e-08!1;DOID:8691!2.64e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.33e-24!102;UBERON:0003061!2.33e-24!102;UBERON:0002371!8.81e-23!80;UBERON:0002193!7.19e-22!112;UBERON:0001474!5.53e-21!86;UBERON:0004765!2.06e-17!101;UBERON:0001434!2.06e-17!101;UBERON:0002405!6.50e-15!115;UBERON:0003081!1.48e-09!216;UBERON:0002204!2.82e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.89e-30,76;UBERON:0001474,1.20e-27,82;UBERON:0004765,4.10e-25,90;UBERON:0002405,2.83e-24,93;UBERON:0002390,5.46e-23,98;UBERON:0003061,5.46e-23,98;UBERON:0001434,1.64e-22,100;UBERON:0002193,9.04e-21,108;UBERON:0002204,5.02e-13,167;UBERON:0003081,1.75e-10,203 | |||
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|short_description=p@chr1:85461941..85461949,+ | |short_description=p@chr1:85461941..85461949,+ | ||
}} | }} |
Latest revision as of 10:46, 28 July 2015
Short description: | p@chr1:85461941..85461949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:85461941..85461949, + |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-39 | 42 |
macrophage dendritic cell progenitor | 2.20e-37 | 61 |
defensive cell | 1.54e-34 | 48 |
phagocyte | 1.54e-34 | 48 |
granulocyte monocyte progenitor cell | 5.44e-34 | 67 |
CD1a-positive Langerhans cell | 9.31e-30 | 2 |
immature CD1a-positive Langerhans cell | 9.31e-30 | 2 |
monopoietic cell | 1.95e-27 | 59 |
monocyte | 1.95e-27 | 59 |
monoblast | 1.95e-27 | 59 |
promonocyte | 1.95e-27 | 59 |
myeloid lineage restricted progenitor cell | 1.83e-24 | 66 |
myeloid leukocyte | 2.28e-22 | 72 |
myeloid cell | 9.04e-21 | 108 |
common myeloid progenitor | 9.04e-21 | 108 |
hematopoietic lineage restricted progenitor cell | 1.37e-18 | 120 |
leukocyte | 2.86e-16 | 136 |
nongranular leukocyte | 1.15e-13 | 115 |
hematopoietic oligopotent progenitor cell | 1.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-13 | 161 |
hematopoietic stem cell | 6.11e-13 | 168 |
Langerhans cell | 1.59e-12 | 5 |
hematopoietic cell | 3.22e-12 | 177 |
immature conventional dendritic cell | 1.36e-10 | 5 |
common dendritic progenitor | 1.36e-10 | 5 |
conventional dendritic cell | 2.36e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.89e-30 | 76 |
bone element | 1.20e-27 | 82 |
skeletal element | 4.10e-25 | 90 |
immune system | 2.83e-24 | 93 |
hematopoietic system | 5.46e-23 | 98 |
blood island | 5.46e-23 | 98 |
skeletal system | 1.64e-22 | 100 |
hemolymphoid system | 9.04e-21 | 108 |
musculoskeletal system | 5.02e-13 | 167 |
lateral plate mesoderm | 1.75e-10 | 203 |