FFCP PHASE1:Hg19::chr16:55525707..55525728,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:55525707..55525728,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_at_chr16:55525707..55525728,+ | |description=CAGE_peak_at_chr16:55525707..55525728,+ | ||
|id=chr16:55525707..55525728,+ | |id=chr16:55525707..55525728,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.95e-33!180;CL:0000057!1.90e-17!75;CL:0000680!3.66e-17!57;CL:0000056!3.66e-17!57;CL:0000355!3.66e-17!57;CL:0000187!1.32e-15!54;CL:0000183!8.64e-15!59;CL:0000393!8.50e-14!60;CL:0000211!8.50e-14!60;CL:0000192!2.57e-13!42;CL:0000514!2.57e-13!42;CL:0000359!8.26e-12!32;CL:0000222!1.75e-11!119;CL:0000048!6.86e-10!430;CL:0002371!3.53e-09!591;CL:0000723!3.79e-09!436;CL:0000034!6.26e-09!444;CL:0000499!2.74e-08!27;CL:0000144!4.60e-08!625;CL:0002494!1.24e-07!16;CL:0002334!3.02e-07!12 | |ontology_enrichment_celltype=CL:0000055!4.95e-33!180;CL:0000057!1.90e-17!75;CL:0000680!3.66e-17!57;CL:0000056!3.66e-17!57;CL:0000355!3.66e-17!57;CL:0000187!1.32e-15!54;CL:0000183!8.64e-15!59;CL:0000393!8.50e-14!60;CL:0000211!8.50e-14!60;CL:0000192!2.57e-13!42;CL:0000514!2.57e-13!42;CL:0000359!8.26e-12!32;CL:0000222!1.75e-11!119;CL:0000048!6.86e-10!430;CL:0002371!3.53e-09!591;CL:0000723!3.79e-09!436;CL:0000034!6.26e-09!444;CL:0000499!2.74e-08!27;CL:0000144!4.60e-08!625;CL:0002494!1.24e-07!16;CL:0002334!3.02e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.39e-13;32!CL:0002539;6.52e-09;10!CL:0000192;1.54e-08;43!CL:0000134;1.54e-08;55!CL:0000499;2.88e-08;28!CL:0002334;4.29e-08;12!CL:0000048;2.45e-07;58!CL:1000306;3.64e-07;4!CL:0002547;3.64e-07;4!CL:0000135;4.35e-07;3!CL:0000388;4.35e-07;3!CL:0000569;4.63e-07;4!CL:0000153;5.32e-07;9!CL:0000447;5.32e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.15e-14,427;CL:0000723,4.10e-14,433;CL:0000034,2.10e-13,441;CL:0000359,2.93e-13,32;CL:0000057,8.90e-12,76;CL:0000192,5.07e-11,43;CL:0000514,5.07e-11,43;CL:0002539,6.18e-09,10;CL:0000680,1.13e-08,58;CL:0000056,1.13e-08,58;CL:0000355,1.13e-08,58;CL:0002320,1.49e-08,361;CL:0000187,2.05e-08,55;CL:0000134,3.71e-08,354;CL:0000499,3.72e-08,28;CL:0002334,4.02e-08,12;CL:0000136,6.01e-08,15;CL:1000306,3.06e-07,4;CL:0002547,3.06e-07,4;CL:0000135,4.48e-07,3;CL:0000388,4.48e-07,3;CL:0000569,4.48e-07,4;CL:0000011,4.48e-07,4;CL:0000393,4.60e-07,61;CL:0000211,4.60e-07,61;CL:0000153,6.85e-07,9;CL:0000447,6.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-08;43!CL:0000011;4.63e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!3.36e-08!14 | |ontology_enrichment_disease=DOID:2394!3.36e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.52e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.48e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.10e-22!84;UBERON:0002385!8.58e-18!63;UBERON:0001015!8.58e-18!63;UBERON:0000383!8.58e-18!63;UBERON:0001134!2.89e-17!61;UBERON:0002036!2.89e-17!61;UBERON:0003082!2.89e-17!61;UBERON:0001981!3.24e-17!60;UBERON:0007500!3.24e-17!60;UBERON:0004537!3.24e-17!60;UBERON:0006965!3.24e-17!60;UBERON:0001637!6.49e-17!42;UBERON:0003509!6.49e-17!42;UBERON:0004572!6.49e-17!42;UBERON:0004290!1.03e-16!70;UBERON:0000914!3.29e-16!83;UBERON:0002329!3.29e-16!83;UBERON:0003077!3.29e-16!83;UBERON:0003059!3.29e-16!83;UBERON:0007282!3.29e-16!83;UBERON:0009618!3.29e-16!83;UBERON:0007285!3.29e-16!83;UBERON:0002049!4.48e-16!79;UBERON:0007798!4.48e-16!79;UBERON:0004535!8.17e-16!110;UBERON:0001009!2.10e-15!113;UBERON:0000486!6.60e-15!82;UBERON:0003914!3.69e-14!118;UBERON:0004573!7.49e-14!33;UBERON:0004571!7.49e-14!33;UBERON:0000055!1.36e-13!69;UBERON:0000490!1.48e-12!138;UBERON:0005256!2.51e-11!143;UBERON:0000948!3.78e-10!24;UBERON:0005498!3.78e-10!24;UBERON:0004140!3.78e-10!24;UBERON:0009881!3.78e-10!24;UBERON:0004141!3.78e-10!24;UBERON:0003084!3.78e-10!24;UBERON:0007005!3.78e-10!24;UBERON:0004139!3.78e-10!24;UBERON:0004291!3.78e-10!24;UBERON:0000947!7.98e-10!21;UBERON:0010191!7.98e-10!21;UBERON:0007100!4.17e-09!27;UBERON:0000926!2.43e-07!448;UBERON:0004120!2.43e-07!448;UBERON:0006603!2.43e-07!448;UBERON:0001135!2.50e-07!15;UBERON:0002100!7.89e-07!216 | |ontology_enrichment_uberon=UBERON:0004872!2.10e-22!84;UBERON:0002385!8.58e-18!63;UBERON:0001015!8.58e-18!63;UBERON:0000383!8.58e-18!63;UBERON:0001134!2.89e-17!61;UBERON:0002036!2.89e-17!61;UBERON:0003082!2.89e-17!61;UBERON:0001981!3.24e-17!60;UBERON:0007500!3.24e-17!60;UBERON:0004537!3.24e-17!60;UBERON:0006965!3.24e-17!60;UBERON:0001637!6.49e-17!42;UBERON:0003509!6.49e-17!42;UBERON:0004572!6.49e-17!42;UBERON:0004290!1.03e-16!70;UBERON:0000914!3.29e-16!83;UBERON:0002329!3.29e-16!83;UBERON:0003077!3.29e-16!83;UBERON:0003059!3.29e-16!83;UBERON:0007282!3.29e-16!83;UBERON:0009618!3.29e-16!83;UBERON:0007285!3.29e-16!83;UBERON:0002049!4.48e-16!79;UBERON:0007798!4.48e-16!79;UBERON:0004535!8.17e-16!110;UBERON:0001009!2.10e-15!113;UBERON:0000486!6.60e-15!82;UBERON:0003914!3.69e-14!118;UBERON:0004573!7.49e-14!33;UBERON:0004571!7.49e-14!33;UBERON:0000055!1.36e-13!69;UBERON:0000490!1.48e-12!138;UBERON:0005256!2.51e-11!143;UBERON:0000948!3.78e-10!24;UBERON:0005498!3.78e-10!24;UBERON:0004140!3.78e-10!24;UBERON:0009881!3.78e-10!24;UBERON:0004141!3.78e-10!24;UBERON:0003084!3.78e-10!24;UBERON:0007005!3.78e-10!24;UBERON:0004139!3.78e-10!24;UBERON:0004291!3.78e-10!24;UBERON:0000947!7.98e-10!21;UBERON:0010191!7.98e-10!21;UBERON:0007100!4.17e-09!27;UBERON:0000926!2.43e-07!448;UBERON:0004120!2.43e-07!448;UBERON:0006603!2.43e-07!448;UBERON:0001135!2.50e-07!15;UBERON:0002100!7.89e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.60e-12;33!UBERON:0004571;2.60e-12;33!UBERON:0001637;7.97e-10;42!UBERON:0003509;7.97e-10;42!UBERON:0004572;7.97e-10;42!UBERON:0004237;6.52e-09;10!UBERON:0004695;6.52e-09;10!UBERON:0002111;6.52e-09;10!UBERON:0004178;6.52e-09;10!UBERON:0000947;1.80e-08;21!UBERON:0010191;1.80e-08;21!UBERON:0007500;2.17e-07;56!UBERON:0001981;2.17e-07;56!UBERON:0004537;2.17e-07;56!UBERON:0004797;3.64e-07;4!UBERON:0000415;3.64e-07;4!UBERON:0007240;3.64e-07;4!UBERON:0005742;3.64e-07;4!UBERON:0005734;3.64e-07;4!UBERON:0004664;3.64e-07;4!UBERON:0004663;3.64e-07;4!UBERON:0007846;4.35e-07;3!UBERON:0000043;4.35e-07;3!UBERON:0007845;4.35e-07;3!UBERON:0004457;7.09e-07;9!UBERON:0000042;7.09e-07;9 | |||
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| ||
|short_description=p@chr16:55525707..55525728,+ | |short_description=p@chr16:55525707..55525728,+ | ||
}} | }} |
Latest revision as of 09:52, 25 July 2015
Short description: | p@chr16:55525707..55525728, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55525707..55525728, + |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.15e-14 | 427 |
somatic stem cell | 4.10e-14 | 433 |
stem cell | 2.10e-13 | 441 |
vascular associated smooth muscle cell | 2.93e-13 | 32 |
fibroblast | 8.90e-12 | 76 |
smooth muscle cell | 5.07e-11 | 43 |
smooth muscle myoblast | 5.07e-11 | 43 |
aortic smooth muscle cell | 6.18e-09 | 10 |
muscle precursor cell | 1.13e-08 | 58 |
myoblast | 1.13e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.13e-08 | 58 |
connective tissue cell | 1.49e-08 | 361 |
muscle cell | 2.05e-08 | 55 |
mesenchymal cell | 3.71e-08 | 354 |
stromal cell | 3.72e-08 | 28 |
preadipocyte | 4.02e-08 | 12 |
fat cell | 6.01e-08 | 15 |
fibroblast of tunica adventitia of artery | 3.06e-07 | 4 |
fibroblast of the aortic adventitia | 3.06e-07 | 4 |
fibrocyte | 4.48e-07 | 3 |
tendon cell | 4.48e-07 | 3 |
cardiac mesenchymal cell | 4.48e-07 | 4 |
migratory trunk neural crest cell | 4.48e-07 | 4 |
electrically responsive cell | 4.60e-07 | 61 |
electrically active cell | 4.60e-07 | 61 |
GAG secreting cell | 6.85e-07 | 9 |
carbohydrate secreting cell | 6.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.48e-08 | 14 |