FFCP PHASE1:Hg19::chr16:57397519..57397530,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:57397519..57397530,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr16:57397519..57397530,+ | |description=CAGE_peak_at_chr16:57397519..57397530,+ | ||
|id=chr16:57397519..57397530,+ | |id=chr16:57397519..57397530,+ | ||
|ontology_enrichment_celltype=CL:0000990!4.40e-42!8;CL:0000451!3.22e-34!10;CL:0000453!2.93e-30!5;CL:0000840!4.59e-25!5;CL:0001029!4.59e-25!5;CL:0000738!3.51e-17!140;CL:0002031!2.25e-14!124;CL:0000945!3.77e-14!24;CL:0000826!3.77e-14!24;CL:0002032!7.38e-14!165;CL:0000837!7.38e-14!165;CL:0000988!2.06e-13!182;CL:0000037!4.23e-13!172;CL:0000566!4.23e-13!172;CL:0001014!6.70e-13!2;CL:0001016!6.70e-13!2;CL:0002087!7.29e-12!119;CL:0000838!2.68e-09!52;CL:0000542!4.33e-09!53;CL:0000051!4.33e-09!53;CL:0002009!3.49e-07!65;CL:0000946!8.67e-07!1;CL:0000786!8.67e-07!1;CL:0000980!8.67e-07!1 | |ontology_enrichment_celltype=CL:0000990!4.40e-42!8;CL:0000451!3.22e-34!10;CL:0000453!2.93e-30!5;CL:0000840!4.59e-25!5;CL:0001029!4.59e-25!5;CL:0000738!3.51e-17!140;CL:0002031!2.25e-14!124;CL:0000945!3.77e-14!24;CL:0000826!3.77e-14!24;CL:0002032!7.38e-14!165;CL:0000837!7.38e-14!165;CL:0000988!2.06e-13!182;CL:0000037!4.23e-13!172;CL:0000566!4.23e-13!172;CL:0001014!6.70e-13!2;CL:0001016!6.70e-13!2;CL:0002087!7.29e-12!119;CL:0000838!2.68e-09!52;CL:0000542!4.33e-09!53;CL:0000051!4.33e-09!53;CL:0002009!3.49e-07!65;CL:0000946!8.67e-07!1;CL:0000786!8.67e-07!1;CL:0000980!8.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000990;8.68e-79;8!CL:0000451;2.35e-64;10!CL:0000453;6.42e-56;5!CL:0000840;2.09e-46;5!CL:0001014;5.47e-23;2!CL:0001016;5.47e-23;2!CL:0000235;3.05e-17;6!CL:0000945;2.71e-11;24!CL:0000738;1.73e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.01e-78,8;CL:0000451,2.66e-64,10;CL:0000453,7.19e-56,5;CL:0000840,2.41e-46,5;CL:0001029,2.41e-46,5;CL:0000738,5.34e-24,136;CL:0001014,6.12e-23,2;CL:0001016,6.12e-23,2;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0002031,2.03e-18,120;CL:0000988,5.62e-18,177;CL:0000235,3.14e-17,6;CL:0002087,3.24e-14,115;CL:0000945,2.71e-11,24;CL:0000826,2.71e-11,24;CL:0000763,6.43e-11,108;CL:0000049,6.43e-11,108;CL:0002009,1.30e-10,61;CL:0000838,1.26e-09,52;CL:0000557,1.35e-09,67;CL:0000542,1.97e-09,53;CL:0000051,1.97e-09,53;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.20e-09!10;DOID:0060060!3.60e-07!1;DOID:0060061!3.60e-07!1;DOID:8691!3.60e-07!1;DOID:630!6.12e-07!1;DOID:0050177!6.12e-07!1;DOID:0050427!6.12e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.64e-12;1!DOID:0060061;3.64e-12;1!DOID:8691;3.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.85e-12,1;DOID:0060061,3.85e-12,1;DOID:8691,3.85e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.15e-09!112;UBERON:0002390!3.82e-08!102;UBERON:0003061!3.82e-08!102;UBERON:0002405!4.38e-08!115;UBERON:0004177!1.29e-07!7;UBERON:0000029!4.57e-07!1;UBERON:0001736!4.85e-07!1;UBERON:0006298!4.85e-07!1;UBERON:0001154!6.88e-07!1;UBERON:0001153!6.88e-07!1;UBERON:0002336!9.73e-07!1;UBERON:0001018!9.73e-07!1;UBERON:0002473!9.73e-07!1;UBERON:0005340!9.73e-07!1;UBERON:0002316!9.73e-07!1;UBERON:0003544!9.73e-07!1;UBERON:0001020!9.73e-07!1;UBERON:0005970!9.73e-07!1;UBERON:0002437!9.73e-07!1 | |ontology_enrichment_uberon=UBERON:0002193!1.15e-09!112;UBERON:0002390!3.82e-08!102;UBERON:0003061!3.82e-08!102;UBERON:0002405!4.38e-08!115;UBERON:0004177!1.29e-07!7;UBERON:0000029!4.57e-07!1;UBERON:0001736!4.85e-07!1;UBERON:0006298!4.85e-07!1;UBERON:0001154!6.88e-07!1;UBERON:0001153!6.88e-07!1;UBERON:0002336!9.73e-07!1;UBERON:0001018!9.73e-07!1;UBERON:0002473!9.73e-07!1;UBERON:0005340!9.73e-07!1;UBERON:0002316!9.73e-07!1;UBERON:0003544!9.73e-07!1;UBERON:0001020!9.73e-07!1;UBERON:0005970!9.73e-07!1;UBERON:0002437!9.73e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.28e-08,76;UBERON:0001474,1.07e-07,82;UBERON:0002384,2.22e-07,371;UBERON:0004765,6.15e-07,90 | |||
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|short_description=p@chr16:57397519..57397530,+ | |short_description=p@chr16:57397519..57397530,+ | ||
}} | }} |
Latest revision as of 10:32, 25 July 2015
Short description: | p@chr16:57397519..57397530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57397519..57397530, + |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.01e-78 | 8 |
dendritic cell | 2.66e-64 | 10 |
Langerhans cell | 7.19e-56 | 5 |
immature conventional dendritic cell | 2.41e-46 | 5 |
common dendritic progenitor | 2.41e-46 | 5 |
leukocyte | 5.34e-24 | 136 |
CD1a-positive Langerhans cell | 6.12e-23 | 2 |
immature CD1a-positive Langerhans cell | 6.12e-23 | 2 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 2.03e-18 | 120 |
hematopoietic cell | 5.62e-18 | 177 |
macrophage | 3.14e-17 | 6 |
nongranular leukocyte | 3.24e-14 | 115 |
lymphocyte of B lineage | 2.71e-11 | 24 |
pro-B cell | 2.71e-11 | 24 |
myeloid cell | 6.43e-11 | 108 |
common myeloid progenitor | 6.43e-11 | 108 |
macrophage dendritic cell progenitor | 1.30e-10 | 61 |
lymphoid lineage restricted progenitor cell | 1.26e-09 | 52 |
granulocyte monocyte progenitor cell | 1.35e-09 | 67 |
lymphocyte | 1.97e-09 | 53 |
common lymphoid progenitor | 1.97e-09 | 53 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.28e-08 | 76 |
bone element | 1.07e-07 | 82 |
connective tissue | 2.22e-07 | 371 |
skeletal element | 6.15e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.85e-12 | 1 |
cutaneous T cell lymphoma | 3.85e-12 | 1 |
mycosis fungoides | 3.85e-12 | 1 |