FFCP PHASE1:Hg19::chr17:32584096..32584112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:32584096..32584112,+ | |||
|coexpression_cluster_id=C874 | |||
|description=CAGE_peak_at_chr17:32584096..32584112,+ | |description=CAGE_peak_at_chr17:32584096..32584112,+ | ||
|id=chr17:32584096..32584112,+ | |id=chr17:32584096..32584112,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.64e-18!63;CL:0000576!2.64e-18!63;CL:0000040!2.64e-18!63;CL:0000559!2.64e-18!63;CL:0002009!1.72e-17!65;CL:0000839!4.88e-17!70;CL:0002057!7.46e-17!42;CL:0000557!1.11e-16!71;CL:0000860!2.61e-15!45;CL:0000766!4.91e-15!76;CL:0000235!1.02e-09!10;CL:0000048!1.29e-08!430;CL:0000723!3.03e-08!436;CL:0000359!7.76e-08!32;CL:0000034!9.08e-08!444;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002144!7.44e-07!3;CL:0002031!7.53e-07!124;CL:0002087!9.16e-07!119 | |ontology_enrichment_celltype=CL:0002194!2.64e-18!63;CL:0000576!2.64e-18!63;CL:0000040!2.64e-18!63;CL:0000559!2.64e-18!63;CL:0002009!1.72e-17!65;CL:0000839!4.88e-17!70;CL:0002057!7.46e-17!42;CL:0000557!1.11e-16!71;CL:0000860!2.61e-15!45;CL:0000766!4.91e-15!76;CL:0000235!1.02e-09!10;CL:0000048!1.29e-08!430;CL:0000723!3.03e-08!436;CL:0000359!7.76e-08!32;CL:0000034!9.08e-08!444;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002144!7.44e-07!3;CL:0002031!7.53e-07!124;CL:0002087!9.16e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;5.68e-25;39!CL:0000234;5.68e-25;39!CL:0000860;1.44e-22;33!CL:0002057;1.44e-22;33!CL:0000576;6.97e-12;48!CL:0000235;2.50e-11;6!CL:0002138;4.21e-11;6!CL:0000766;3.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.77e-26,48;CL:0000234,6.77e-26,48;CL:0002194,3.54e-20,59;CL:0000576,3.54e-20,59;CL:0000040,3.54e-20,59;CL:0000559,3.54e-20,59;CL:0002009,1.93e-19,61;CL:0000860,4.19e-18,42;CL:0002057,4.19e-18,42;CL:0000839,8.69e-18,66;CL:0000557,1.74e-17,67;CL:0000766,4.20e-16,72;CL:0000235,2.14e-11,6;CL:0005020,3.37e-11,6;CL:0002138,3.37e-11,6;CL:0005022,3.37e-11,6;CL:0000763,6.75e-10,108;CL:0000049,6.75e-10,108;CL:0002087,3.87e-09,115;CL:0002031,1.19e-08,120;CL:0000738,2.47e-07,136;CL:0000359,4.22e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-12;42!CL:0005022;4.21e-11;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001473;1.91e-08;8!UBERON:0004536;1.91e-08;8!UBERON:0006558;1.91e-08;8!UBERON:0002465;7.64e-07;10 | |||
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|short_description=p@chr17:32584096..32584112,+ | |short_description=p@chr17:32584096..32584112,+ | ||
}} | }} |
Latest revision as of 15:33, 25 July 2015
Short description: | p@chr17:32584096..32584112, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:32584096..32584112, + |
Coexpression cluster: | C874_Monocytederived_CD14_Mast_Lymphatic_Smooth_Neurons_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.77e-26 | 48 |
phagocyte | 6.77e-26 | 48 |
monopoietic cell | 3.54e-20 | 59 |
monocyte | 3.54e-20 | 59 |
monoblast | 3.54e-20 | 59 |
promonocyte | 3.54e-20 | 59 |
macrophage dendritic cell progenitor | 1.93e-19 | 61 |
classical monocyte | 4.19e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.19e-18 | 42 |
myeloid lineage restricted progenitor cell | 8.69e-18 | 66 |
granulocyte monocyte progenitor cell | 1.74e-17 | 67 |
myeloid leukocyte | 4.20e-16 | 72 |
macrophage | 2.14e-11 | 6 |
lymphangioblast | 3.37e-11 | 6 |
endothelial cell of lymphatic vessel | 3.37e-11 | 6 |
vascular lymphangioblast | 3.37e-11 | 6 |
myeloid cell | 6.75e-10 | 108 |
common myeloid progenitor | 6.75e-10 | 108 |
nongranular leukocyte | 3.87e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.19e-08 | 120 |
leukocyte | 2.47e-07 | 136 |
vascular associated smooth muscle cell | 4.22e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.24e-18 | 93 |
hemolymphoid system | 3.01e-15 | 108 |
bone marrow | 3.98e-15 | 76 |
musculoskeletal system | 4.05e-14 | 167 |
bone element | 7.73e-14 | 82 |
skeletal element | 2.20e-12 | 90 |
lateral plate mesoderm | 3.03e-12 | 203 |
hematopoietic system | 3.63e-11 | 98 |
blood island | 3.63e-11 | 98 |
skeletal system | 6.82e-11 | 100 |
lymphatic vessel | 1.62e-08 | 8 |
lymph vasculature | 1.62e-08 | 8 |
lymphatic part of lymphoid system | 1.62e-08 | 8 |
vessel | 2.05e-08 | 68 |
mesoderm | 3.05e-07 | 315 |
mesoderm-derived structure | 3.05e-07 | 315 |
presumptive mesoderm | 3.05e-07 | 315 |
vasculature | 3.98e-07 | 78 |
vascular system | 3.98e-07 | 78 |
lymphoid system | 6.71e-07 | 10 |