FFCP PHASE1:Hg19::chr21:44817397..44817432,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:44817397..44817432,- | |||
|description=CAGE_peak_at_chr21:44817397..44817432,- | |description=CAGE_peak_at_chr21:44817397..44817432,- | ||
|id=chr21:44817397..44817432,- | |id=chr21:44817397..44817432,- | ||
|ontology_enrichment_celltype=CL:0000066!4.38e-13!254;CL:0002150!5.55e-11!3;CL:0000861!5.55e-11!3;CL:1000415!2.09e-07!2 | |ontology_enrichment_celltype=CL:0000066!4.38e-13!254;CL:0002150!5.55e-11!3;CL:0000861!5.55e-11!3;CL:1000415!2.09e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.42e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.09e-33;29!UBERON:0006595;2.87e-12;86!UBERON:0006242;8.45e-09;1!UBERON:0006298;1.47e-08;1 | |||
|ontology_enrichment_disease=DOID:305!6.86e-33!106;DOID:0050687!6.72e-22!143;DOID:162!5.03e-14!235;DOID:14566!1.60e-13!239;DOID:1324!1.91e-07!15;DOID:299!6.02e-07!25;DOID:0050615!6.21e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:305;4.37e-08;106!DOID:1324;8.53e-08;15!DOID:0050615;2.58e-07;16!DOID:3908;8.28e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.65e-28,106;DOID:0050687,4.28e-20,143;DOID:162,7.49e-12,235;DOID:14566,1.62e-11,239;DOID:1324,9.77e-08,15;DOID:0050615,2.93e-07,16;DOID:3908,8.90e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.21e-23!9;UBERON:0004921!3.20e-20!129;UBERON:0004185!3.20e-20!129;UBERON:0000077!3.56e-20!130;UBERON:0001007!3.07e-19!155;UBERON:0001555!3.07e-19!155;UBERON:0007026!3.07e-19!155;UBERON:0001041!7.05e-19!98;UBERON:0001557!7.44e-19!19;UBERON:0000072!9.27e-19!46;UBERON:0004119!4.38e-18!169;UBERON:0000925!4.38e-18!169;UBERON:0006595!4.38e-18!169;UBERON:0008947!1.85e-16!38;UBERON:0003258!1.85e-16!38;UBERON:0000065!1.14e-15!53;UBERON:0001004!7.81e-15!72;UBERON:0002294!5.05e-12!7;UBERON:0001173!5.05e-12!7;UBERON:0004912!5.05e-12!7;UBERON:0002110!1.22e-10!3;UBERON:0006242!1.22e-10!3;UBERON:0003104!1.14e-08!238;UBERON:0009142!1.14e-08!238;UBERON:0001829!1.09e-07!2;UBERON:0000063!1.40e-07!97;UBERON:0005911!2.94e-07!82;UBERON:0001048!9.28e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.11e-50;9!UBERON:0001557;9.11e-50;9!UBERON:0000072;5.85e-21;37!UBERON:0000065;2.96e-17;44!UBERON:0002294;5.27e-17;7!UBERON:0001173;5.27e-17;7!UBERON:0002110;6.79e-11;3!UBERON:0001004;6.65e-10;65!UBERON:0001736;1.47e-08;1!UBERON:0004913;3.05e-08;1!UBERON:0003703;3.05e-08;1!UBERON:0001174;3.05e-08;1!UBERON:0004914;3.05e-08;1!UBERON:0002394;3.47e-08;4!UBERON:0003928;3.47e-08;4!UBERON:0000058;3.85e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.47e-50,9;UBERON:0008947,7.27e-25,38;UBERON:0003258,7.27e-25,38;UBERON:0001557,3.78e-23,19;UBERON:0001041,2.04e-20,87;UBERON:0000072,1.08e-19,47;UBERON:0004921,4.20e-18,118;UBERON:0001007,8.59e-18,145;UBERON:0001555,8.59e-18,145;UBERON:0007026,8.59e-18,145;UBERON:0000065,7.36e-17,54;UBERON:0001004,3.11e-16,74;UBERON:0004119,9.11e-16,160;UBERON:0000925,9.11e-16,160;UBERON:0006595,9.11e-16,160;UBERON:0002294,2.66e-13,9;UBERON:0001173,2.66e-13,9;UBERON:0004912,2.66e-13,9;UBERON:0002110,7.14e-11,3;UBERON:0006242,7.14e-11,3;UBERON:0001048,1.03e-09,160;UBERON:0001736,1.18e-08,1;UBERON:0006298,1.18e-08,1;UBERON:0004913,2.46e-08,1;UBERON:0003703,2.46e-08,1;UBERON:0001174,2.46e-08,1;UBERON:0004914,2.46e-08,1;UBERON:0011216,9.25e-08,223;UBERON:0002108,9.70e-07,4 | |||
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| ||
|short_description=p@chr21:44817397..44817432,- | |short_description=p@chr21:44817397..44817432,- | ||
}} | }} |
Latest revision as of 18:17, 28 July 2015
Short description: | p@chr21:44817397..44817432, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44817397..44817432, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.42e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.47e-50 | 9 |
respiratory primordium | 7.27e-25 | 38 |
endoderm of foregut | 7.27e-25 | 38 |
upper respiratory tract | 3.78e-23 | 19 |
foregut | 2.04e-20 | 87 |
segment of respiratory tract | 1.08e-19 | 47 |
subdivision of digestive tract | 4.20e-18 | 118 |
digestive system | 8.59e-18 | 145 |
digestive tract | 8.59e-18 | 145 |
primitive gut | 8.59e-18 | 145 |
respiratory tract | 7.36e-17 | 54 |
respiratory system | 3.11e-16 | 74 |
endoderm-derived structure | 9.11e-16 | 160 |
endoderm | 9.11e-16 | 160 |
presumptive endoderm | 9.11e-16 | 160 |
biliary system | 2.66e-13 | 9 |
biliary tree | 2.66e-13 | 9 |
biliary bud | 2.66e-13 | 9 |
gallbladder | 7.14e-11 | 3 |
gall bladder primordium | 7.14e-11 | 3 |
primordium | 1.03e-09 | 160 |
submandibular gland | 1.18e-08 | 1 |
submandibular gland primordium | 1.18e-08 | 1 |
hepatopancreatic ampulla | 2.46e-08 | 1 |
extrahepatic bile duct | 2.46e-08 | 1 |
common bile duct | 2.46e-08 | 1 |
duodenal papilla | 2.46e-08 | 1 |
organ system subdivision | 9.25e-08 | 223 |
small intestine | 9.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.65e-28 | 106 |
cell type cancer | 4.28e-20 | 143 |
cancer | 7.49e-12 | 235 |
disease of cellular proliferation | 1.62e-11 | 239 |
lung cancer | 9.77e-08 | 15 |
respiratory system cancer | 2.93e-07 | 16 |
non-small cell lung carcinoma | 8.90e-07 | 5 |