FFCP PHASE1:Hg19::chr11:64577991..64578062,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4221 | |EntrezGene=4221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7010 | |HGNC=7010 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENS2,E7ET29,E7EPR4,O00255,Q9GZQ5 | |UniProt=E7ENS2,E7ET29,E7EPR4,O00255,Q9GZQ5 | ||
|association_with_transcript=0bp_to_ENST00000377321,ENST00000413626,ENST00000440873,ENST00000450708,NM_130800,NM_130801,uc001obj.2,uc001obk.2,uc001obl.2_5end | |||
|cluster_id=chr11:64577991..64578062,- | |||
|description=CAGE_peak_1_at_MEN1_5end | |||
|id=chr11:64577991..64578062,- | |||
|ontology_enrichment_celltype=CL:0000066!1.93e-15!254;CL:0002321!2.19e-15!248;CL:0000220!6.24e-15!246;CL:0002078!3.21e-08!44;CL:0000076!5.63e-08!62;CL:0000222!6.80e-08!119;CL:0000115!7.70e-08!35;CL:1000449!2.82e-07!16;CL:0000055!6.22e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.62e-07;15!CL:0000115;2.92e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.23e-16,250;CL:0000066,2.56e-15,253;CL:0002078,1.21e-08,45;CL:0000222,2.67e-08,121;CL:0000115,2.78e-08,36;CL:0000076,4.94e-08,63;CL:1000449,2.77e-07,15;CL:0000213,4.44e-07,58;CL:0000215,4.44e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.68e-09!235;DOID:14566!5.80e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.68e-09,235;DOID:14566,5.80e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000119!3.50e-17!312;UBERON:0000475!3.91e-17!365;UBERON:0000483!1.47e-16!309;UBERON:0000481!8.33e-14!347;UBERON:0000477!9.80e-11!286;UBERON:0004111!2.03e-10!241;UBERON:0005177!6.11e-10!107;UBERON:0000064!1.29e-09!219;UBERON:0000025!3.56e-09!194;UBERON:0009569!9.74e-09!113;UBERON:0002100!3.44e-08!216;UBERON:0003104!3.89e-08!238;UBERON:0009142!3.89e-08!238;UBERON:0000924!6.93e-08!173;UBERON:0006601!6.93e-08!173;UBERON:0005172!1.49e-07!55;UBERON:0005173!1.49e-07!55;UBERON:0004121!1.55e-07!169;UBERON:0004211!2.82e-07!16;UBERON:0001285!2.82e-07!16;UBERON:0007684!2.82e-07!16;UBERON:0003220!2.82e-07!16;UBERON:0004208!2.82e-07!16;UBERON:0002113!3.38e-07!27;UBERON:0003918!3.38e-07!27;UBERON:0005095!3.38e-07!27;UBERON:0007687!3.38e-07!27;UBERON:0000487!4.35e-07!22;UBERON:0000490!5.99e-07!138;UBERON:0000080!6.88e-07!18;UBERON:0002120!6.88e-07!18;UBERON:0004875!6.88e-07!18;UBERON:0005721!6.88e-07!18;UBERON:0005754!6.88e-07!18;UBERON:0007297!6.88e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;7.85e-08;30!UBERON:0001008;7.85e-08;30!UBERON:0002113;2.22e-07;24!UBERON:0011143;2.22e-07;24!UBERON:0006555;2.62e-07;15!UBERON:0004819;2.62e-07;15!UBERON:0001285;2.62e-07;15!UBERON:0007684;2.62e-07;15!UBERON:0000487;3.74e-07;22!UBERON:0000490;3.75e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.37e-17,309;UBERON:0000483,1.01e-16,306;UBERON:0004111,1.37e-10,240;UBERON:0005177,2.05e-10,101;UBERON:0000025,2.94e-09,192;UBERON:0009569,1.14e-08,112;UBERON:0002100,2.01e-08,199;UBERON:0000490,6.52e-08,148;UBERON:0004121,8.45e-08,171;UBERON:0000924,8.45e-08,171;UBERON:0006601,8.45e-08,171;UBERON:0005172,1.85e-07,54;UBERON:0005173,1.85e-07,54;UBERON:0003104,1.99e-07,160;UBERON:0009142,1.99e-07,160;UBERON:0006554,2.48e-07,47;UBERON:0004211,2.77e-07,15;UBERON:0009773,2.77e-07,15;UBERON:0001231,2.77e-07,15;UBERON:0001285,2.77e-07,15;UBERON:0007684,2.77e-07,15;UBERON:0004208,2.77e-07,15;UBERON:0001008,3.33e-07,48;UBERON:0002113,3.92e-07,26;UBERON:0003918,3.92e-07,26;UBERON:0011143,3.92e-07,26;UBERON:0005095,3.92e-07,26;UBERON:0007687,3.92e-07,26;UBERON:0000487,4.35e-07,22 | |||
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| ||
|short_description=p1@MEN1 | |||
}} | }} |
Latest revision as of 04:45, 19 September 2015
Short description: | p1@MEN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377321, ENST00000413626, ENST00000440873, ENST00000450708, NM_130800, NM_130801, uc001obj.2, uc001obk.2, uc001obl.2_5end |
EntrezGene: | MEN1 |
HGNC: | 7010 |
UniProt: | E7ENS2E7ET29E7EPR4O00255Q9GZQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.23e-16 | 250 |
epithelial cell | 2.56e-15 | 253 |
meso-epithelial cell | 1.21e-08 | 45 |
mesodermal cell | 2.67e-08 | 121 |
endothelial cell | 2.78e-08 | 36 |
squamous epithelial cell | 4.94e-08 | 63 |
epithelial cell of nephron | 2.77e-07 | 15 |
lining cell | 4.44e-07 | 58 |
barrier cell | 4.44e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.37e-17 | 309 |
epithelium | 1.01e-16 | 306 |
anatomical conduit | 1.37e-10 | 240 |
trunk region element | 2.05e-10 | 101 |
tube | 2.94e-09 | 192 |
subdivision of trunk | 1.14e-08 | 112 |
trunk | 2.01e-08 | 199 |
unilaminar epithelium | 6.52e-08 | 148 |
ectoderm-derived structure | 8.45e-08 | 171 |
ectoderm | 8.45e-08 | 171 |
presumptive ectoderm | 8.45e-08 | 171 |
abdomen element | 1.85e-07 | 54 |
abdominal segment element | 1.85e-07 | 54 |
mesenchyme | 1.99e-07 | 160 |
entire embryonic mesenchyme | 1.99e-07 | 160 |
urinary system structure | 2.48e-07 | 47 |
nephron epithelium | 2.77e-07 | 15 |
renal tubule | 2.77e-07 | 15 |
nephron tubule | 2.77e-07 | 15 |
nephron | 2.77e-07 | 15 |
uriniferous tubule | 2.77e-07 | 15 |
nephrogenic mesenchyme | 2.77e-07 | 15 |
renal system | 3.33e-07 | 48 |
kidney | 3.92e-07 | 26 |
kidney mesenchyme | 3.92e-07 | 26 |
upper urinary tract | 3.92e-07 | 26 |
kidney rudiment | 3.92e-07 | 26 |
kidney field | 3.92e-07 | 26 |
simple squamous epithelium | 4.35e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.68e-09 | 235 |
disease of cellular proliferation | 5.80e-09 | 239 |