FFCP PHASE1:Hg19::chr2:220408430..220408555,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79586 | |EntrezGene=79586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24291 | |HGNC=24291 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZ52 | |UniProt=Q8IZ52 | ||
|association_with_transcript=0bp_to_ENST00000243776,NM_024536,uc002vmc.3,uc002vmd.3_5end | |association_with_transcript=0bp_to_ENST00000243776,NM_024536,uc002vmc.3,uc002vmd.3_5end | ||
|cluster_id=chr2:220408430..220408555,- | |||
|coexpression_cluster_id=C4191 | |||
|description=CAGE_peak_1_at_CHPF_5end | |description=CAGE_peak_1_at_CHPF_5end | ||
|id=chr2:220408430..220408555,- | |id=chr2:220408430..220408555,- | ||
|ontology_enrichment_celltype=CL:0000055!2.89e-25!180;CL:0000220!2.11e-11!246;CL:0002321!3.27e-11!248;CL:0000680!3.27e-11!57;CL:0000056!3.27e-11!57;CL:0000355!3.27e-11!57;CL:0000183!4.22e-11!59;CL:0000192!1.25e-10!42;CL:0000514!1.25e-10!42;CL:0000187!2.14e-10!54;CL:0000057!1.09e-09!75;CL:0000393!1.43e-09!60;CL:0000211!1.43e-09!60;CL:0000359!1.06e-08!32;CL:0000325!2.63e-08!39;CL:0002077!5.17e-07!33 | |ontology_enrichment_celltype=CL:0000055!2.89e-25!180;CL:0000220!2.11e-11!246;CL:0002321!3.27e-11!248;CL:0000680!3.27e-11!57;CL:0000056!3.27e-11!57;CL:0000355!3.27e-11!57;CL:0000183!4.22e-11!59;CL:0000192!1.25e-10!42;CL:0000514!1.25e-10!42;CL:0000187!2.14e-10!54;CL:0000057!1.09e-09!75;CL:0000393!1.43e-09!60;CL:0000211!1.43e-09!60;CL:0000359!1.06e-08!32;CL:0000325!2.63e-08!39;CL:0002077!5.17e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.67e-09;19!CL:0000359;2.89e-08;32!CL:0000192;9.30e-08;43!CL:0000134;3.19e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.10e-11,58;CL:0000056,3.10e-11,58;CL:0000355,3.10e-11,58;CL:0002321,5.57e-11,250;CL:0000192,1.26e-10,43;CL:0000514,1.26e-10,43;CL:0000187,2.03e-10,55;CL:0000057,4.53e-10,76;CL:0000393,1.31e-09,61;CL:0000211,1.31e-09,61;CL:0000349,1.64e-09,19;CL:0000359,1.05e-08,32;CL:0002077,1.94e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000514;9.30e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.45e-21!365;UBERON:0002100!7.07e-15!216;UBERON:0000481!1.18e-14!347;UBERON:0005256!1.58e-12!143;UBERON:0003104!7.82e-11!238;UBERON:0009142!7.82e-11!238;UBERON:0000486!8.01e-11!82;UBERON:0001048!1.87e-10!168;UBERON:0000914!7.68e-10!83;UBERON:0002329!7.68e-10!83;UBERON:0003077!7.68e-10!83;UBERON:0003059!7.68e-10!83;UBERON:0007282!7.68e-10!83;UBERON:0009618!7.68e-10!83;UBERON:0007285!7.68e-10!83;UBERON:0001134!8.71e-10!61;UBERON:0002036!8.71e-10!61;UBERON:0003082!8.71e-10!61;UBERON:0000119!9.61e-10!312;UBERON:0000483!1.18e-09!309;UBERON:0002385!2.54e-09!63;UBERON:0001015!2.54e-09!63;UBERON:0000383!2.54e-09!63;UBERON:0004290!3.93e-09!70;UBERON:0004923!8.62e-09!57;UBERON:0000478!2.36e-08!24;UBERON:0000468!6.35e-08!659;UBERON:0000466!6.85e-08!126;UBERON:0005631!7.16e-08!14;UBERON:0000158!7.16e-08!14;UBERON:0009569!2.19e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.33e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.94e-14,199;UBERON:0003104,1.30e-12,160;UBERON:0009142,1.30e-12,160;UBERON:0000486,7.16e-11,83;UBERON:0005256,8.74e-11,122;UBERON:0001048,1.79e-10,160;UBERON:0000119,2.68e-10,309;UBERON:0000483,3.30e-10,306;UBERON:0001134,8.00e-10,62;UBERON:0002036,8.00e-10,62;UBERON:0003082,8.00e-10,62;UBERON:0007524,1.77e-09,73;UBERON:0002385,2.31e-09,64;UBERON:0001015,2.31e-09,64;UBERON:0000383,2.31e-09,64;UBERON:0002329,3.53e-09,71;UBERON:0003059,3.53e-09,71;UBERON:0007282,3.53e-09,71;UBERON:0004290,3.53e-09,71;UBERON:0009618,3.53e-09,71;UBERON:0003077,4.67e-09,72;UBERON:0007285,4.67e-09,72;UBERON:0004923,5.98e-09,66;UBERON:0007503,1.93e-08,78;UBERON:0000478,2.33e-08,24;UBERON:0005631,7.08e-08,14;UBERON:0000158,7.08e-08,14;UBERON:0003102,4.08e-07,99;UBERON:0009569,4.37e-07,112 | |||
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| ||
|short_description=p1@CHPF | |short_description=p1@CHPF | ||
}} | }} |
Latest revision as of 21:48, 24 September 2015
Short description: | p1@CHPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHPF_5end |
Coexpression cluster: | C4191_Smooth_Mesenchymal_leiomyoma_Fibroblast_Preadipocyte_Adipocyte_Placental |
Association with transcript: | 0bp_to_ENST00000243776, NM_024536, uc002vmc.3, uc002vmd.3_5end |
EntrezGene: | CHPF |
HGNC: | 24291 |
UniProt: | Q8IZ52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.10e-11 | 58 |
myoblast | 3.10e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-11 | 58 |
embryonic cell | 5.57e-11 | 250 |
smooth muscle cell | 1.26e-10 | 43 |
smooth muscle myoblast | 1.26e-10 | 43 |
muscle cell | 2.03e-10 | 55 |
fibroblast | 4.53e-10 | 76 |
electrically responsive cell | 1.31e-09 | 61 |
electrically active cell | 1.31e-09 | 61 |
extraembryonic cell | 1.64e-09 | 19 |
vascular associated smooth muscle cell | 1.05e-08 | 32 |
ecto-epithelial cell | 1.94e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
trunk | 7.94e-14 | 199 |
mesenchyme | 1.30e-12 | 160 |
entire embryonic mesenchyme | 1.30e-12 | 160 |
multilaminar epithelium | 7.16e-11 | 83 |
trunk mesenchyme | 8.74e-11 | 122 |
primordium | 1.79e-10 | 160 |
cell layer | 2.68e-10 | 309 |
epithelium | 3.30e-10 | 306 |
skeletal muscle tissue | 8.00e-10 | 62 |
striated muscle tissue | 8.00e-10 | 62 |
myotome | 8.00e-10 | 62 |
dense mesenchyme tissue | 1.77e-09 | 73 |
muscle tissue | 2.31e-09 | 64 |
musculature | 2.31e-09 | 64 |
musculature of body | 2.31e-09 | 64 |
somite | 3.53e-09 | 71 |
presomitic mesoderm | 3.53e-09 | 71 |
presumptive segmental plate | 3.53e-09 | 71 |
dermomyotome | 3.53e-09 | 71 |
trunk paraxial mesoderm | 3.53e-09 | 71 |
paraxial mesoderm | 4.67e-09 | 72 |
presumptive paraxial mesoderm | 4.67e-09 | 72 |
organ component layer | 5.98e-09 | 66 |
epithelial vesicle | 1.93e-08 | 78 |
extraembryonic structure | 2.33e-08 | 24 |
extraembryonic membrane | 7.08e-08 | 14 |
membranous layer | 7.08e-08 | 14 |
surface structure | 4.08e-07 | 99 |
subdivision of trunk | 4.37e-07 | 112 |