FFCP PHASE1:Hg19::chr2:70336251..70336262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:70336251..70336262,+ | |||
|coexpression_cluster_id=C694 | |||
|description=CAGE_peak_at_chr2:70336251..70336262,+ | |description=CAGE_peak_at_chr2:70336251..70336262,+ | ||
|id=chr2:70336251..70336262,+ | |id=chr2:70336251..70336262,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.94e-31!140;CL:0002031!3.26e-28!124;CL:0002087!3.30e-25!119;CL:0000037!8.97e-25!172;CL:0000566!8.97e-25!172;CL:0002032!1.84e-24!165;CL:0000837!1.84e-24!165;CL:0000988!2.74e-22!182;CL:0000557!6.06e-15!71;CL:0000791!6.17e-14!18;CL:0000789!6.17e-14!18;CL:0002420!6.17e-14!18;CL:0002419!6.17e-14!18;CL:0000790!6.17e-14!18;CL:0000838!1.29e-13!52;CL:0000542!3.27e-13!53;CL:0000051!3.27e-13!53;CL:0000766!3.61e-13!76;CL:0002009!8.42e-13!65;CL:0000839!9.00e-13!70;CL:0000084!3.46e-12!25;CL:0000827!3.46e-12!25;CL:0000860!6.26e-12!45;CL:0000763!7.26e-12!112;CL:0000049!7.26e-12!112;CL:0002194!5.05e-11!63;CL:0000576!5.05e-11!63;CL:0000040!5.05e-11!63;CL:0000559!5.05e-11!63;CL:0002057!6.48e-11!42;CL:0000625!5.17e-09!11;CL:0000453!1.55e-08!5;CL:0000990!3.05e-08!8;CL:0000624!1.01e-07!6;CL:0000134!8.48e-07!358 | |ontology_enrichment_celltype=CL:0000738!1.94e-31!140;CL:0002031!3.26e-28!124;CL:0002087!3.30e-25!119;CL:0000037!8.97e-25!172;CL:0000566!8.97e-25!172;CL:0002032!1.84e-24!165;CL:0000837!1.84e-24!165;CL:0000988!2.74e-22!182;CL:0000557!6.06e-15!71;CL:0000791!6.17e-14!18;CL:0000789!6.17e-14!18;CL:0002420!6.17e-14!18;CL:0002419!6.17e-14!18;CL:0000790!6.17e-14!18;CL:0000838!1.29e-13!52;CL:0000542!3.27e-13!53;CL:0000051!3.27e-13!53;CL:0000766!3.61e-13!76;CL:0002009!8.42e-13!65;CL:0000839!9.00e-13!70;CL:0000084!3.46e-12!25;CL:0000827!3.46e-12!25;CL:0000860!6.26e-12!45;CL:0000763!7.26e-12!112;CL:0000049!7.26e-12!112;CL:0002194!5.05e-11!63;CL:0000576!5.05e-11!63;CL:0000040!5.05e-11!63;CL:0000559!5.05e-11!63;CL:0002057!6.48e-11!42;CL:0000625!5.17e-09!11;CL:0000453!1.55e-08!5;CL:0000990!3.05e-08!8;CL:0000624!1.01e-07!6;CL:0000134!8.48e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.32e-27;18!CL:0000789;1.32e-27;18!CL:0002419;1.32e-27;18!CL:0000623;1.70e-25;3!CL:0000624;2.20e-21;6!CL:0000084;1.35e-19;25!CL:0001014;2.64e-17;2!CL:0001016;2.64e-17;2!CL:0000453;4.22e-15;5!CL:0000625;3.41e-12;11!CL:0000542;3.39e-10;53!CL:0000990;1.27e-08;8!CL:0002087;1.90e-07;104!CL:0000451;3.89e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.11e-27,18;CL:0000789,1.11e-27,18;CL:0002420,1.11e-27,18;CL:0002419,1.11e-27,18;CL:0000790,1.11e-27,18;CL:0000623,1.57e-25,3;CL:0000825,1.57e-25,3;CL:0000624,1.44e-21,6;CL:0000838,2.27e-20,52;CL:0000542,6.02e-20,53;CL:0000051,6.02e-20,53;CL:0000084,1.19e-19,25;CL:0000827,1.19e-19,25;CL:0002031,2.20e-18,120;CL:0000738,7.32e-18,136;CL:0001014,2.25e-17,2;CL:0001016,2.25e-17,2;CL:0000453,4.65e-15,5;CL:0002087,7.19e-15,115;CL:0002032,1.38e-14,161;CL:0000837,1.38e-14,161;CL:0000037,7.69e-14,168;CL:0000988,5.72e-13,177;CL:0000625,3.72e-12,11;CL:0000990,1.34e-08,8;CL:0000451,4.06e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;1.32e-27;18!CL:0000051;3.39e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.73e-09;4!DOID:1612;5.73e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.51e-09,4;DOID:1612,4.51e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.47e-14!80;UBERON:0002390!3.14e-13!102;UBERON:0003061!3.14e-13!102;UBERON:0002405!9.82e-13!115;UBERON:0001474!1.69e-12!86;UBERON:0002193!9.02e-12!112;UBERON:0004765!3.16e-09!101;UBERON:0001434!3.16e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr2:70336251..70336262,+ | |short_description=p@chr2:70336251..70336262,+ | ||
}} | }} |
Latest revision as of 11:54, 29 July 2015
Short description: | p@chr2:70336251..70336262, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:70336251..70336262, + |
Coexpression cluster: | C694_immature_Natural_CD8_CD14_Eosinophils_Basophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.11e-27 | 18 |
alpha-beta T cell | 1.11e-27 | 18 |
immature T cell | 1.11e-27 | 18 |
mature T cell | 1.11e-27 | 18 |
immature alpha-beta T cell | 1.11e-27 | 18 |
natural killer cell | 1.57e-25 | 3 |
pro-NK cell | 1.57e-25 | 3 |
CD4-positive, alpha-beta T cell | 1.44e-21 | 6 |
lymphoid lineage restricted progenitor cell | 2.27e-20 | 52 |
lymphocyte | 6.02e-20 | 53 |
common lymphoid progenitor | 6.02e-20 | 53 |
T cell | 1.19e-19 | 25 |
pro-T cell | 1.19e-19 | 25 |
hematopoietic lineage restricted progenitor cell | 2.20e-18 | 120 |
leukocyte | 7.32e-18 | 136 |
CD1a-positive Langerhans cell | 2.25e-17 | 2 |
immature CD1a-positive Langerhans cell | 2.25e-17 | 2 |
Langerhans cell | 4.65e-15 | 5 |
nongranular leukocyte | 7.19e-15 | 115 |
hematopoietic oligopotent progenitor cell | 1.38e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-14 | 161 |
hematopoietic stem cell | 7.69e-14 | 168 |
hematopoietic cell | 5.72e-13 | 177 |
CD8-positive, alpha-beta T cell | 3.72e-12 | 11 |
conventional dendritic cell | 1.34e-08 | 8 |
dendritic cell | 4.06e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.51e-09 | 4 |
breast cancer | 4.51e-09 | 4 |