FFCP PHASE1:Hg19::chr12:125348448..125348472,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:125348448..125348472,-
|short_description=p2@SCARB1
|description=CAGE_peak_2_at_SCARB1_5end
|association_with_transcript=0bp_to_ENST00000339570_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=949 | |EntrezGene=949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1664 | |HGNC=1664 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8N0 | |UniProt=F8W8N0 | ||
|association_with_transcript=0bp_to_ENST00000339570_5end | |||
|cluster_id=chr12:125348448..125348472,- | |||
|coexpression_cluster_id=C3250 | |||
|description=CAGE_peak_2_at_SCARB1_5end | |||
|id=chr12:125348448..125348472,- | |||
|ontology_enrichment_celltype=CL:0000066!6.35e-21!254;CL:0002321!1.66e-10!248;CL:0000220!2.25e-10!246;CL:0000147!1.11e-07!14;CL:0002078!7.68e-07!44;CL:0000213!8.16e-07!57;CL:0000215!8.16e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.06e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.99e-21,253;CL:0002321,1.32e-10,250;CL:0000147,1.10e-07,14;CL:0002078,4.01e-07,45;CL:0000213,4.44e-07,58;CL:0000215,4.44e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.86e-08!235;DOID:14566!7.41e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.78e-08,235;DOID:14566,7.20e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.30e-17!312;UBERON:0000483!1.22e-16!309;UBERON:0000481!1.07e-14!347;UBERON:0000477!7.67e-13!286;UBERON:0005172!4.41e-11!55;UBERON:0005173!4.41e-11!55;UBERON:0005177!4.85e-11!107;UBERON:0000064!1.90e-10!219;UBERON:0000475!5.58e-10!365;UBERON:0002417!2.92e-09!61;UBERON:0000916!2.92e-09!61;UBERON:0004111!3.02e-09!241;UBERON:0003075!3.82e-09!86;UBERON:0007284!3.82e-09!86;UBERON:0003056!3.97e-09!61;UBERON:0002346!1.19e-08!90;UBERON:0000025!1.27e-08!194;UBERON:0009569!1.48e-08!113;UBERON:0004921!2.00e-08!129;UBERON:0004185!2.00e-08!129;UBERON:0002107!2.24e-08!19;UBERON:0006925!2.24e-08!19;UBERON:0008836!2.24e-08!19;UBERON:0004119!3.16e-08!169;UBERON:0000925!3.16e-08!169;UBERON:0006595!3.16e-08!169;UBERON:0001007!3.39e-08!155;UBERON:0001555!3.39e-08!155;UBERON:0007026!3.39e-08!155;UBERON:0000033!4.64e-08!123;UBERON:0000063!1.46e-07!97;UBERON:0000970!1.54e-07!20;UBERON:0000922!1.90e-07!612;UBERON:0009497!2.06e-07!25;UBERON:0000015!2.06e-07!25;UBERON:0002423!2.06e-07!25;UBERON:0006235!2.06e-07!25;UBERON:0004161!2.06e-07!25;UBERON:0002104!2.26e-07!21;UBERON:0000019!2.81e-07!19;UBERON:0000047!2.81e-07!19;UBERON:0004088!2.81e-07!19;UBERON:0003072!2.81e-07!19;UBERON:0003071!2.81e-07!19;UBERON:0004128!2.81e-07!19;UBERON:0003104!4.24e-07!238;UBERON:0009142!4.24e-07!238;UBERON:0002050!6.49e-07!605;UBERON:0005423!6.49e-07!605;UBERON:0000923!6.60e-07!604;UBERON:0005291!6.60e-07!604;UBERON:0006598!6.60e-07!604;UBERON:0002532!6.60e-07!604;UBERON:0008835!7.28e-07!22;UBERON:0003894!7.28e-07!22;UBERON:0000077!8.46e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.49e-08;19!UBERON:0006925;2.49e-08;19!UBERON:0005172;3.49e-08;52!UBERON:0005173;3.49e-08;52!UBERON:0000970;1.56e-07;20!UBERON:0002104;2.29e-07;21!UBERON:0002423;2.55e-07;25!UBERON:0000019;2.95e-07;19!UBERON:0000047;2.95e-07;19!UBERON:0004088;2.95e-07;19!UBERON:0010230;2.95e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.71e-16,309;UBERON:0000483,2.84e-15,306;UBERON:0011216,1.61e-12,223;UBERON:0005172,1.87e-11,54;UBERON:0005173,1.87e-11,54;UBERON:0005177,1.02e-10,101;UBERON:0002417,1.47e-09,60;UBERON:0000916,1.47e-09,60;UBERON:0004921,3.24e-09,118;UBERON:0004111,5.43e-09,240;UBERON:0003056,8.04e-09,61;UBERON:0009569,8.56e-09,112;UBERON:0001007,1.33e-08,145;UBERON:0001555,1.33e-08,145;UBERON:0007026,1.33e-08,145;UBERON:0000025,1.48e-08,192;UBERON:0004119,1.89e-08,160;UBERON:0000925,1.89e-08,160;UBERON:0006595,1.89e-08,160;UBERON:0002107,2.21e-08,19;UBERON:0006925,2.21e-08,19;UBERON:0008836,2.21e-08,19;UBERON:0003075,5.57e-08,82;UBERON:0007284,5.57e-08,82;UBERON:0001041,1.57e-07,87;UBERON:0002346,1.57e-07,86;UBERON:0009497,2.04e-07,25;UBERON:0000015,2.04e-07,25;UBERON:0002423,2.04e-07,25;UBERON:0006235,2.04e-07,25;UBERON:0004161,2.04e-07,25;UBERON:0000970,2.24e-07,21;UBERON:0002104,2.24e-07,21;UBERON:0000019,4.08e-07,20;UBERON:0000047,4.08e-07,20;UBERON:0010312,4.08e-07,20;UBERON:0004088,4.08e-07,20;UBERON:0010230,4.08e-07,20;UBERON:0003072,4.08e-07,20;UBERON:0004128,4.08e-07,20;UBERON:0003071,4.08e-07,20;UBERON:0010371,4.81e-07,104;UBERON:0008835,7.20e-07,22;UBERON:0003894,7.20e-07,22;UBERON:0001048,7.72e-07,160 | |||
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| ||
|short_description=p2@SCARB1 | |||
}} | }} |
Latest revision as of 04:38, 17 September 2015
Short description: | p2@SCARB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCARB1_5end |
Coexpression cluster: | C3250_liver_Hepatocyte_Melanocyte_Monocytederived_placenta_Meningeal_Pericytes |
Association with transcript: | 0bp_to_ENST00000339570_5end |
EntrezGene: | SCARB1 |
HGNC: | 1664 |
UniProt: | F8W8N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.99e-21 | 253 |
embryonic cell | 1.32e-10 | 250 |
pigment cell | 1.10e-07 | 14 |
meso-epithelial cell | 4.01e-07 | 45 |
lining cell | 4.44e-07 | 58 |
barrier cell | 4.44e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.78e-08 | 235 |
disease of cellular proliferation | 7.20e-08 | 239 |