FFCP PHASE1:Hg19::chr3:147127358..147127369,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |UniProt=Q15915 | ||
|association_with_transcript=177bp_to_NM_003412,uc003ewe.2_5end | |association_with_transcript=177bp_to_NM_003412,uc003ewe.2_5end | ||
|cluster_id=chr3:147127358..147127369,+ | |||
|coexpression_cluster_id=C4292 | |||
|description=CAGE_peak_16_at_ZIC1_5end | |description=CAGE_peak_16_at_ZIC1_5end | ||
|id=chr3:147127358..147127369,+ | |id=chr3:147127358..147127369,+ | ||
|ontology_enrichment_celltype=CL:0000128!2.33e-16!7;CL:0000126!2.33e-16!7;CL:0000127!2.33e-16!7;CL:0002453!2.33e-16!7;CL:0002603!2.55e-11!3;CL:0000064!5.10e-11!3;CL:0005012!5.10e-11!3;CL:0000067!5.10e-11!3;CL:0002304!5.10e-11!3;CL:0000133!7.47e-11!59;CL:0000243!1.20e-10!15;CL:0000125!1.20e-10!15;CL:0000030!1.20e-10!15;CL:0000339!1.20e-10!15;CL:0002319!1.17e-09!25;CL:0002605!1.20e-09!3;CL:0000095!2.22e-09!17;CL:0000123!2.22e-09!17;CL:0000221!2.08e-08!71;CL:0002575!4.79e-08!2;CL:0000333!6.21e-08!41;CL:0002549!7.14e-08!2 | |ontology_enrichment_celltype=CL:0000128!2.33e-16!7;CL:0000126!2.33e-16!7;CL:0000127!2.33e-16!7;CL:0002453!2.33e-16!7;CL:0002603!2.55e-11!3;CL:0000064!5.10e-11!3;CL:0005012!5.10e-11!3;CL:0000067!5.10e-11!3;CL:0002304!5.10e-11!3;CL:0000133!7.47e-11!59;CL:0000243!1.20e-10!15;CL:0000125!1.20e-10!15;CL:0000030!1.20e-10!15;CL:0000339!1.20e-10!15;CL:0002319!1.17e-09!25;CL:0002605!1.20e-09!3;CL:0000095!2.22e-09!17;CL:0000123!2.22e-09!17;CL:0000221!2.08e-08!71;CL:0002575!4.79e-08!2;CL:0000333!6.21e-08!41;CL:0002549!7.14e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002603;1.11e-38;3!CL:0000064;3.55e-37;3!CL:0000067;3.55e-37;3!CL:0005012;3.55e-37;3!CL:0002304;3.55e-37;3!CL:0002575;3.16e-26;2!CL:0002549;1.05e-25;2!CL:0000128;5.45e-17;7!CL:0000126;5.45e-17;7!CL:0000127;5.45e-17;7!CL:0000669;1.26e-13;4!CL:0000075;1.41e-07;27!CL:0000243;2.56e-07;15!CL:0000125;2.56e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,9.75e-39,3;CL:0000064,1.39e-37,3;CL:0000067,1.39e-37,3;CL:0005012,1.39e-37,3;CL:0002304,1.39e-37,3;CL:0002575,3.16e-26,2;CL:0002549,1.44e-25,2;CL:0000128,5.16e-17,7;CL:0000126,5.16e-17,7;CL:0000127,5.16e-17,7;CL:0002453,5.16e-17,7;CL:0000669,1.26e-13,4;CL:0000075,1.23e-07,27;CL:0000243,2.51e-07,15;CL:0000125,2.51e-07,15;CL:0000030,2.51e-07,15;CL:0000339,2.51e-07,15;CL:0000133,4.44e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000339;2.56e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.86e-46!82;UBERON:0002616!1.45e-44!59;UBERON:0005743!2.09e-43!86;UBERON:0000955!1.95e-41!69;UBERON:0006238!1.95e-41!69;UBERON:0000073!7.65e-41!94;UBERON:0001016!7.65e-41!94;UBERON:0001049!9.22e-40!57;UBERON:0005068!9.22e-40!57;UBERON:0006241!9.22e-40!57;UBERON:0007135!9.22e-40!57;UBERON:0003075!1.66e-39!86;UBERON:0007284!1.66e-39!86;UBERON:0002346!2.44e-37!90;UBERON:0000033!1.03e-31!123;UBERON:0000153!8.89e-30!129;UBERON:0007811!8.89e-30!129;UBERON:0004121!8.14e-29!169;UBERON:0003076!1.31e-28!15;UBERON:0003057!1.31e-28!15;UBERON:0000924!6.75e-28!173;UBERON:0006601!6.75e-28!173;UBERON:0004733!2.13e-25!12;UBERON:0002028!2.13e-25!12;UBERON:0007277!2.13e-25!12;UBERON:0004732!2.84e-23!13;UBERON:0003056!4.35e-22!61;UBERON:0002200!2.35e-18!11;UBERON:0006876!2.35e-18!11;UBERON:0002780!2.69e-18!41;UBERON:0001890!2.69e-18!41;UBERON:0006240!2.69e-18!41;UBERON:0003080!9.11e-18!42;UBERON:0001893!1.28e-17!34;UBERON:0002680!1.91e-17!9;UBERON:0001895!1.91e-17!9;UBERON:0010092!1.91e-17!9;UBERON:0002791!5.83e-16!33;UBERON:0002020!1.55e-15!34;UBERON:0003528!1.55e-15!34;UBERON:0002037!2.53e-14!6;UBERON:0006215!2.53e-14!6;UBERON:0001869!3.29e-14!32;UBERON:0000488!7.74e-14!4;UBERON:0002298!2.33e-13!8;UBERON:0001778!5.10e-11!3;UBERON:0001775!5.10e-11!3;UBERON:0005284!5.74e-11!5;UBERON:0007625!1.70e-10!11;UBERON:0001896!6.91e-10!3;UBERON:0005290!6.91e-10!3;UBERON:0010096!6.91e-10!3;UBERON:0000956!1.93e-09!25;UBERON:0000203!1.93e-09!25;UBERON:0000475!2.06e-09!365;UBERON:0000119!2.63e-09!312;UBERON:0002203!3.25e-09!6;UBERON:0001768!3.25e-09!6;UBERON:0007023!6.53e-09!115;UBERON:0000477!7.64e-09!286;UBERON:0000064!1.42e-08!219;UBERON:0002308!3.21e-08!9;UBERON:0000125!3.21e-08!9;UBERON:0000483!4.21e-08!309;UBERON:0001801!4.47e-08!14;UBERON:0003947!7.14e-08!2;UBERON:0005629!7.14e-08!2;UBERON:0005358!7.14e-08!2;UBERON:0001886!7.14e-08!2;UBERON:0004086!7.14e-08!2;UBERON:0005282!7.14e-08!2;UBERON:0005281!7.14e-08!2;UBERON:0000025!2.72e-07!194;UBERON:0000369!3.20e-07!4;UBERON:0002435!3.20e-07!4;UBERON:0000204!3.20e-07!4;UBERON:0010082!3.20e-07!4;UBERON:0001897!3.44e-07!2;UBERON:0009663!5.90e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.03e-39;11!UBERON:0001778;3.55e-37;3!UBERON:0001775;3.55e-37;3!UBERON:0000488;4.40e-28;4!UBERON:0005629;1.05e-25;2!UBERON:0005358;1.05e-25;2!UBERON:0001886;1.05e-25;2!UBERON:0004086;1.05e-25;2!UBERON:0005282;1.05e-25;2!UBERON:0005281;1.05e-25;2!UBERON:0005284;8.55e-23;5!UBERON:0002037;1.03e-19;6!UBERON:0002203;5.77e-19;6!UBERON:0001768;5.77e-19;6!UBERON:0002200;5.77e-19;6!UBERON:0007625;3.13e-18;11!UBERON:0004733;4.33e-17;12!UBERON:0002028;4.33e-17;12!UBERON:0004732;8.46e-16;13!UBERON:0001801;2.15e-14;14!UBERON:0002680;2.37e-13;9!UBERON:0001895;2.37e-13;9!UBERON:0000019;1.12e-10;19!UBERON:0000047;1.12e-10;19!UBERON:0004088;1.12e-10;19!UBERON:0010230;1.12e-10;19!UBERON:0000970;3.72e-10;20!UBERON:0002104;1.11e-09;21!UBERON:0001456;1.11e-09;21!UBERON:0000020;7.36e-09;23!UBERON:0001032;1.69e-08;24!UBERON:0004456;1.69e-08;24!UBERON:0001897;1.93e-07;2!UBERON:0010225;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,8.72e-40,11;UBERON:0001778,1.39e-37,3;UBERON:0001775,1.39e-37,3;UBERON:0000488,2.18e-28,4;UBERON:0005629,1.44e-25,2;UBERON:0005358,1.44e-25,2;UBERON:0001886,1.44e-25,2;UBERON:0004086,1.44e-25,2;UBERON:0005282,1.44e-25,2;UBERON:0005281,1.44e-25,2;UBERON:0005284,1.24e-22,5;UBERON:0002037,9.72e-20,6;UBERON:0006215,9.72e-20,6;UBERON:0002203,3.63e-19,6;UBERON:0001768,3.63e-19,6;UBERON:0002200,3.63e-19,6;UBERON:0007625,2.18e-18,11;UBERON:0004733,4.81e-17,12;UBERON:0002028,4.81e-17,12;UBERON:0007277,4.81e-17,12;UBERON:0004732,9.31e-16,13;UBERON:0001801,1.63e-14,14;UBERON:0003076,1.07e-13,15;UBERON:0003057,1.07e-13,15;UBERON:0002680,2.27e-13,9;UBERON:0001895,2.27e-13,9;UBERON:0010092,2.27e-13,9;UBERON:0003075,3.69e-11,82;UBERON:0007284,3.69e-11,82;UBERON:0002346,1.34e-10,86;UBERON:0000955,1.55e-10,68;UBERON:0006238,1.55e-10,68;UBERON:0000019,3.07e-10,20;UBERON:0000047,3.07e-10,20;UBERON:0010312,3.07e-10,20;UBERON:0004088,3.07e-10,20;UBERON:0010230,3.07e-10,20;UBERON:0003072,3.07e-10,20;UBERON:0004128,3.07e-10,20;UBERON:0003071,3.07e-10,20;UBERON:0000970,9.20e-10,21;UBERON:0002104,9.20e-10,21;UBERON:0001456,2.50e-09,22;UBERON:0004121,9.29e-09,171;UBERON:0000924,9.29e-09,171;UBERON:0006601,9.29e-09,171;UBERON:0001017,9.35e-09,81;UBERON:0010371,1.34e-08,104;UBERON:0000020,1.44e-08,24;UBERON:0001032,1.44e-08,24;UBERON:0004456,1.44e-08,24;UBERON:0001016,8.14e-08,89;UBERON:0001897,1.99e-07,2;UBERON:0010225,1.99e-07,2 | |||
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| ||
|short_description=p16@ZIC1 | |short_description=p16@ZIC1 | ||
}} | }} |
Latest revision as of 18:50, 15 September 2015
Short description: | p16@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ZIC1_5end |
Coexpression cluster: | C4292_synovial_Pericytes_Astrocyte_Ciliary_Lens_Smooth_Fibroblast |
Association with transcript: | 177bp_to_NM_003412, uc003ewe.2_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 9.75e-39 | 3 |
ciliated cell | 1.39e-37 | 3 |
ciliated epithelial cell | 1.39e-37 | 3 |
multi-ciliated epithelial cell | 1.39e-37 | 3 |
non-pigmented ciliary epithelial cell | 1.39e-37 | 3 |
central nervous system pericyte | 3.16e-26 | 2 |
fibroblast of choroid plexus | 1.44e-25 | 2 |
oligodendrocyte | 5.16e-17 | 7 |
macroglial cell | 5.16e-17 | 7 |
astrocyte | 5.16e-17 | 7 |
oligodendrocyte precursor cell | 5.16e-17 | 7 |
pericyte cell | 1.26e-13 | 4 |
columnar/cuboidal epithelial cell | 1.23e-07 | 27 |
glial cell (sensu Vertebrata) | 2.51e-07 | 15 |
glial cell | 2.51e-07 | 15 |
glioblast | 2.51e-07 | 15 |
glioblast (sensu Vertebrata) | 2.51e-07 | 15 |
neurectodermal cell | 4.44e-07 | 59 |