FFCP PHASE1:Hg19::chr12:21654768..21654779,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:21654768..21654779,+
|short_description=p3@GOLT1B
|description=CAGE_peak_3_at_GOLT1B_5end
|association_with_transcript=5bp_to_ENST00000539025_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51026 | |EntrezGene=51026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20175 | |HGNC=20175 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXH6 | |UniProt=F5GXH6 | ||
|association_with_transcript=5bp_to_ENST00000539025_5end | |||
|cluster_id=chr12:21654768..21654779,+ | |||
|description=CAGE_peak_3_at_GOLT1B_5end | |||
|id=chr12:21654768..21654779,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-25!180;CL:0000548!4.79e-17!679;CL:0000004!4.79e-17!679;CL:0000255!4.79e-17!679;CL:0000012!6.28e-17!682;CL:0000144!4.43e-15!625;CL:0000048!6.22e-15!430;CL:0000034!1.27e-14!444;CL:0000723!3.68e-14!436;CL:0000680!2.20e-13!57;CL:0000056!2.20e-13!57;CL:0000355!2.20e-13!57;CL:0000057!4.91e-13!75;CL:0000393!1.96e-12!60;CL:0000211!1.96e-12!60;CL:0000187!2.65e-12!54;CL:0000192!3.27e-12!42;CL:0000514!3.27e-12!42;CL:0000003!1.26e-11!722;CL:0002371!4.52e-11!591;CL:0000359!5.08e-11!32;CL:0000183!2.22e-09!59;CL:0002620!1.67e-07!23;CL:0002334!3.37e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.05e-11;32!CL:0000192;2.47e-08;43!CL:0000723;6.05e-08;61!CL:0000134;8.38e-08;55!CL:0002620;1.11e-07;23!CL:0000048;2.31e-07;58!CL:0002334;2.55e-07;12!CL:0000187;3.18e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.30e-15,427;CL:0000034,4.06e-15,441;CL:0000723,1.52e-14,433;CL:0000057,1.82e-14,76;CL:0000680,8.31e-13,58;CL:0000056,8.31e-13,58;CL:0000355,8.31e-13,58;CL:0000393,6.75e-12,61;CL:0000211,6.75e-12,61;CL:0000187,1.03e-11,55;CL:0000192,1.58e-11,43;CL:0000514,1.58e-11,43;CL:0000359,2.33e-11,32;CL:0002620,6.26e-08,23;CL:0002334,2.11e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.47e-08;43!CL:0000355;9.87e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!9.64e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.69e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.27e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.31e-14!83;UBERON:0002329!1.31e-14!83;UBERON:0003077!1.31e-14!83;UBERON:0003059!1.31e-14!83;UBERON:0007282!1.31e-14!83;UBERON:0009618!1.31e-14!83;UBERON:0007285!1.31e-14!83;UBERON:0004290!8.56e-13!70;UBERON:0000486!2.27e-12!82;UBERON:0001134!8.70e-12!61;UBERON:0002036!8.70e-12!61;UBERON:0003082!8.70e-12!61;UBERON:0002385!9.86e-11!63;UBERON:0001015!9.86e-11!63;UBERON:0000383!9.86e-11!63;UBERON:0004573!1.38e-07!33;UBERON:0004571!1.38e-07!33;UBERON:0001637!2.04e-07!42;UBERON:0003509!2.04e-07!42;UBERON:0004572!2.04e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.12e-07;33!UBERON:0004571;7.12e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.46e-12,71;UBERON:0003059,1.46e-12,71;UBERON:0007282,1.46e-12,71;UBERON:0004290,1.46e-12,71;UBERON:0009618,1.46e-12,71;UBERON:0007524,2.90e-12,73;UBERON:0000486,4.62e-12,83;UBERON:0003077,5.55e-12,72;UBERON:0007285,5.55e-12,72;UBERON:0001134,1.67e-11,62;UBERON:0002036,1.67e-11,62;UBERON:0003082,1.67e-11,62;UBERON:0002385,2.37e-10,64;UBERON:0001015,2.37e-10,64;UBERON:0000383,2.37e-10,64;UBERON:0007503,2.75e-09,78;UBERON:0004573,1.86e-07,33;UBERON:0004571,1.86e-07,33;UBERON:0002199,3.36e-07,46;UBERON:0002416,3.36e-07,46;UBERON:0001637,3.43e-07,42;UBERON:0003509,3.43e-07,42;UBERON:0004572,3.43e-07,42;UBERON:0005256,3.86e-07,122 | |||
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| ||
|short_description=p3@GOLT1B | |||
}} | }} |
Latest revision as of 19:38, 17 September 2015
Short description: | p3@GOLT1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GOLT1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000539025_5end |
EntrezGene: | GOLT1B |
HGNC: | 20175 |
UniProt: | F5GXH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.30e-15 | 427 |
stem cell | 4.06e-15 | 441 |
somatic stem cell | 1.52e-14 | 433 |
fibroblast | 1.82e-14 | 76 |
muscle precursor cell | 8.31e-13 | 58 |
myoblast | 8.31e-13 | 58 |
multi-potent skeletal muscle stem cell | 8.31e-13 | 58 |
electrically responsive cell | 6.75e-12 | 61 |
electrically active cell | 6.75e-12 | 61 |
muscle cell | 1.03e-11 | 55 |
smooth muscle cell | 1.58e-11 | 43 |
smooth muscle myoblast | 1.58e-11 | 43 |
vascular associated smooth muscle cell | 2.33e-11 | 32 |
skin fibroblast | 6.26e-08 | 23 |
preadipocyte | 2.11e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
somite | 1.46e-12 | 71 |
presomitic mesoderm | 1.46e-12 | 71 |
presumptive segmental plate | 1.46e-12 | 71 |
dermomyotome | 1.46e-12 | 71 |
trunk paraxial mesoderm | 1.46e-12 | 71 |
dense mesenchyme tissue | 2.90e-12 | 73 |
multilaminar epithelium | 4.62e-12 | 83 |
paraxial mesoderm | 5.55e-12 | 72 |
presumptive paraxial mesoderm | 5.55e-12 | 72 |
skeletal muscle tissue | 1.67e-11 | 62 |
striated muscle tissue | 1.67e-11 | 62 |
myotome | 1.67e-11 | 62 |
muscle tissue | 2.37e-10 | 64 |
musculature | 2.37e-10 | 64 |
musculature of body | 2.37e-10 | 64 |
epithelial vesicle | 2.75e-09 | 78 |
systemic artery | 1.86e-07 | 33 |
systemic arterial system | 1.86e-07 | 33 |
integument | 3.36e-07 | 46 |
integumental system | 3.36e-07 | 46 |
artery | 3.43e-07 | 42 |
arterial blood vessel | 3.43e-07 | 42 |
arterial system | 3.43e-07 | 42 |
trunk mesenchyme | 3.86e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.27e-07 | 14 |