FFCP PHASE1:Hg19::chr19:54062986..54063018,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54062986..54063018,+ | |||
|coexpression_cluster_id=C437 | |||
|description=CAGE_peak_at_chr19:54062986..54063018,+ | |description=CAGE_peak_at_chr19:54062986..54063018,+ | ||
|id=chr19:54062986..54063018,+ | |id=chr19:54062986..54063018,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.02e-10!140;CL:0002087!6.83e-09!119;CL:0002031!1.31e-08!124;CL:0000624!1.46e-07!6;CL:0000037!1.66e-07!172;CL:0000566!1.66e-07!172;CL:0002032!6.44e-07!165;CL:0000837!6.44e-07!165;CL:0000988!7.59e-07!182 | |ontology_enrichment_celltype=CL:0000738!2.02e-10!140;CL:0002087!6.83e-09!119;CL:0002031!1.31e-08!124;CL:0000624!1.46e-07!6;CL:0000037!1.66e-07!172;CL:0000566!1.66e-07!172;CL:0002032!6.44e-07!165;CL:0000837!6.44e-07!165;CL:0000988!7.59e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.18e-19;6!CL:0000791;7.02e-16;18!CL:0000789;7.02e-16;18!CL:0002419;7.02e-16;18!CL:0000623;2.63e-15;3!CL:0000226;2.21e-14;3!CL:0000842;2.21e-14;3!CL:0000084;4.61e-11;25!CL:0000815;9.19e-10;2!CL:0000792;9.19e-10;2!CL:0002677;9.19e-10;2!CL:0000542;1.10e-08;53!CL:0000898;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.04e-19,6;CL:0000738,4.16e-17,136;CL:0002087,4.97e-16,115;CL:0000791,6.84e-16,18;CL:0000789,6.84e-16,18;CL:0002420,6.84e-16,18;CL:0002419,6.84e-16,18;CL:0000790,6.84e-16,18;CL:0000623,2.34e-15,3;CL:0000825,2.34e-15,3;CL:0000838,4.22e-15,52;CL:0000542,9.33e-15,53;CL:0000051,9.33e-15,53;CL:0000226,2.32e-14,3;CL:0000842,2.32e-14,3;CL:0002031,1.21e-13,120;CL:0000037,9.74e-13,168;CL:0000988,8.53e-12,177;CL:0000084,4.52e-11,25;CL:0000827,4.52e-11,25;CL:0002032,5.31e-10,161;CL:0000837,5.31e-10,161;CL:0000815,8.03e-10,2;CL:0000792,8.03e-10,2;CL:0002677,8.03e-10,2;CL:0000898,8.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.02e-16;18!CL:0000051;1.10e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-13!115;UBERON:0001049!5.94e-13!57;UBERON:0005068!5.94e-13!57;UBERON:0006241!5.94e-13!57;UBERON:0007135!5.94e-13!57;UBERON:0002780!6.76e-11!41;UBERON:0001890!6.76e-11!41;UBERON:0006240!6.76e-11!41;UBERON:0002346!1.59e-10!90;UBERON:0003080!1.95e-10!42;UBERON:0003075!4.28e-10!86;UBERON:0007284!4.28e-10!86;UBERON:0002616!2.00e-09!59;UBERON:0001017!3.06e-08!82;UBERON:0005743!6.74e-08!86;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0002020!1.32e-07!34;UBERON:0003528!1.32e-07!34;UBERON:0001894!2.63e-07!7;UBERON:0006222!2.63e-07!7;UBERON:0002791!4.95e-07!33;UBERON:0003056!8.08e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.80e-13!115;UBERON:0001049!5.94e-13!57;UBERON:0005068!5.94e-13!57;UBERON:0006241!5.94e-13!57;UBERON:0007135!5.94e-13!57;UBERON:0002780!6.76e-11!41;UBERON:0001890!6.76e-11!41;UBERON:0006240!6.76e-11!41;UBERON:0002346!1.59e-10!90;UBERON:0003080!1.95e-10!42;UBERON:0003075!4.28e-10!86;UBERON:0007284!4.28e-10!86;UBERON:0002616!2.00e-09!59;UBERON:0001017!3.06e-08!82;UBERON:0005743!6.74e-08!86;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0002020!1.32e-07!34;UBERON:0003528!1.32e-07!34;UBERON:0001894!2.63e-07!7;UBERON:0006222!2.63e-07!7;UBERON:0002791!4.95e-07!33;UBERON:0003056!8.08e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.09e-10;4!UBERON:0010133;1.09e-10;4!UBERON:0000007;4.63e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.21e-10,4;UBERON:0010133,1.21e-10,4;UBERON:0000007,3.52e-10,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,1.80490002723128,1.51907609501096,0,0,0,0,0.377875943688809,0.242584061187816,0.929716147622738,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0,0.689491361473237,1.29096936716765,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,1.27867425159808,0,0,0,0,0,0,2.51248665256743,2.60741459210101,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,0,5.69212969109448,4.69789751496751,8.02773779062981,0,0.560508562981536,0,6.09800287352883,8.64623678048162,7.40165396398233,0,1.30368906653436,1.4203434172042,0,0,1.76763544484902,1.32920336750173,1.08321545506006,0.25618263945135,0.260118695119756,0,0,0,2.52087157375503,0.802622484269139,2.09071047609954,0,0.383220493601921,0,1.77113784413652,0,0,0,0,0,0,0,0,5.64498881029251,5.34880391567015,9.12393744461634,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,2.48793738648926,1.58531948758658,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,3.74358444383662,5.82194452120697,6.16046574142792,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,2.89475236572042,1.07857100409308,2.66818894508611,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0.562677665642051,0,0,0,1.59398390600856,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0,0.347249989866585,0.885741385813839,0,3.05163472634166,0.442317039724898,0,0.219385397153973,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0.123563938946503,0.104421949505455,0.269604531922708,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0.343972064943233,0,0.0730893170861856,0,0,0.0882561266915003,0.225980740780532,0,0,0.50648636764703,0,0.160317640503067,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0.137539436597234,0,0.674921674654501,0,0.121499113316049,0,0,0.262272940674991,0,0,0,0,0,0.25426853765475,0,0,0,0,0.492555124496034,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.320362237703084,0,1.24271716604159,0,0,0,0,0,0,0,0,0,2.65820453990096,0,0.500763722825999,0,0,0.124192805882767,0.415045904808692,0,0,0,0.235265819698172,0,0,0,0,0,0.568209015825267,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.489473409012935,0,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850299680406731,0.371807292777007,0,0,0.0788617450012534,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0.252071696221718,0,0.968853873791107,0,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0,0,0.620060389503552,0.126831620387814,0.546974809018219,0,0.496211178389294,0,0,0.535701835878287,1.00885116665647,2.42786241694653,1.82129753081038,0,0,0,0.475788130837822,0.131545547125698,0.118193840883968,0.111231401892069,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.214429632529969,0,0,0.173858272302579,0,0.207216164163037,0.6828739083758,0,0,0,0,1.69354820076372,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0.233939463462106,0.198950775161368,0,0,0.109940516745429,0.301925687133347,0,0,0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| ||
|short_description=p@chr19:54062986..54063018,+ | |short_description=p@chr19:54062986..54063018,+ | ||
}} | }} |
Latest revision as of 17:00, 27 July 2015
Short description: | p@chr19:54062986..54063018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54062986..54063018, + |
Coexpression cluster: | C437_CD4_CD8_Natural_CD19_thyroid_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.04e-19 | 6 |
leukocyte | 4.16e-17 | 136 |
nongranular leukocyte | 4.97e-16 | 115 |
mature alpha-beta T cell | 6.84e-16 | 18 |
alpha-beta T cell | 6.84e-16 | 18 |
immature T cell | 6.84e-16 | 18 |
mature T cell | 6.84e-16 | 18 |
immature alpha-beta T cell | 6.84e-16 | 18 |
natural killer cell | 2.34e-15 | 3 |
pro-NK cell | 2.34e-15 | 3 |
lymphoid lineage restricted progenitor cell | 4.22e-15 | 52 |
lymphocyte | 9.33e-15 | 53 |
common lymphoid progenitor | 9.33e-15 | 53 |
single nucleate cell | 2.32e-14 | 3 |
mononuclear cell | 2.32e-14 | 3 |
hematopoietic lineage restricted progenitor cell | 1.21e-13 | 120 |
hematopoietic stem cell | 9.74e-13 | 168 |
hematopoietic cell | 8.53e-12 | 177 |
T cell | 4.52e-11 | 25 |
pro-T cell | 4.52e-11 | 25 |
hematopoietic oligopotent progenitor cell | 5.31e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.31e-10 | 161 |
regulatory T cell | 8.03e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.03e-10 | 2 |
naive regulatory T cell | 8.03e-10 | 2 |
naive T cell | 8.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.21e-10 | 4 |
neuroendocrine gland | 1.21e-10 | 4 |
pituitary gland | 3.52e-10 | 2 |