FFCP PHASE1:Hg19::chr3:29966392..29966406,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27303 | |EntrezGene=27303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13427 | |HGNC=13427 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=150bp_to_ENST00000473799_5end | |association_with_transcript=150bp_to_ENST00000473799_5end | ||
|cluster_id=chr3:29966392..29966406,+ | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_22_at_RBMS3_5end | |description=CAGE_peak_22_at_RBMS3_5end | ||
|id=chr3:29966392..29966406,+ | |id=chr3:29966392..29966406,+ | ||
|ontology_enrichment_celltype=CL:0002617!9.40e-09!2 | |ontology_enrichment_celltype=CL:0002617!9.40e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000135;3.33e-27;3!CL:0000388;3.33e-27;3!CL:0000214;7.50e-08;3!CL:0002621;7.50e-08;3!CL:0000499;5.82e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.11e-27,3;CL:0000388,3.11e-27,3;CL:0002621,7.26e-08,3;CL:0000214,7.76e-08,3;CL:0000499,5.82e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.97e-45;4!UBERON:0007284;1.97e-45;4!UBERON:0006965;1.82e-11;2!UBERON:0003104;1.34e-10;31 | |||
|ontology_enrichment_disease=DOID:114!8.69e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!1.07e-13!3;UBERON:0009751!1.07e-13!3;UBERON:0000946!1.07e-13!3;UBERON:0002523!1.07e-13!3;UBERON:0005983!1.07e-13!3;UBERON:0002165!1.07e-13!3;UBERON:0002062!1.07e-13!3;UBERON:0007280!1.07e-13!3;UBERON:0007023!4.39e-11!115;UBERON:0002133!1.10e-09!2;UBERON:0002081!1.89e-09!2;UBERON:0000341!1.34e-08!2;UBERON:0007100!1.81e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.98e-60;3!UBERON:0000946;2.98e-60;3!UBERON:0002133;1.10e-40;2!UBERON:0007846;3.33e-27;3!UBERON:0000043;3.33e-27;3!UBERON:0007845;3.33e-27;3!UBERON:0002146;1.88e-21;1!UBERON:0005623;1.88e-21;1!UBERON:0002135;2.30e-21;1!UBERON:0002134;3.45e-21;1!UBERON:0005208;3.45e-21;1!UBERON:0004145;3.45e-21;1!UBERON:0005946;3.45e-21;1!UBERON:0005965;3.45e-21;1!UBERON:0002078;3.45e-21;1!UBERON:0010313;1.13e-18;10!UBERON:0002081;2.73e-11;2!UBERON:0000948;7.61e-09;22!UBERON:0004151;5.93e-08;3!UBERON:0007100;7.48e-08;25!UBERON:0006915;7.50e-08;3!UBERON:0007616;7.50e-08;3!UBERON:0002217;7.50e-08;3!UBERON:0002018;7.50e-08;3!UBERON:0001949;7.50e-08;3!UBERON:0000486;1.73e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.43e-60,3;UBERON:0009751,2.43e-60,3;UBERON:0000946,2.43e-60,3;UBERON:0002523,2.43e-60,3;UBERON:0005983,2.43e-60,3;UBERON:0002165,2.43e-60,3;UBERON:0002062,2.43e-60,3;UBERON:0007280,2.43e-60,3;UBERON:0002133,8.98e-41,2;UBERON:0007846,3.11e-27,3;UBERON:0000043,3.11e-27,3;UBERON:0007845,3.11e-27,3;UBERON:0004797,2.25e-26,7;UBERON:0002146,1.88e-21,1;UBERON:0005623,1.88e-21,1;UBERON:0002135,2.30e-21,1;UBERON:0002134,2.82e-21,1;UBERON:0005208,2.82e-21,1;UBERON:0005946,2.82e-21,1;UBERON:0005965,2.82e-21,1;UBERON:0002078,2.82e-21,1;UBERON:0010313,1.07e-18,10;UBERON:0002342,1.07e-18,10;UBERON:0005062,1.07e-18,10;UBERON:0002081,2.47e-11,2;UBERON:0010227,2.47e-11,2;UBERON:0000948,3.63e-08,24;UBERON:0005498,3.63e-08,24;UBERON:0004140,3.63e-08,24;UBERON:0009881,3.63e-08,24;UBERON:0004141,3.63e-08,24;UBERON:0003084,3.63e-08,24;UBERON:0007005,3.63e-08,24;UBERON:0004139,3.63e-08,24;UBERON:0004291,3.63e-08,24;UBERON:0004151,5.54e-08,3;UBERON:0004145,5.54e-08,3;UBERON:0001949,7.26e-08,3;UBERON:0006915,7.76e-08,3;UBERON:0007616,7.76e-08,3;UBERON:0002217,7.76e-08,3;UBERON:0002018,7.76e-08,3;UBERON:0004923,1.21e-07,66;UBERON:0007100,2.54e-07,27 | |||
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| ||
|short_description=p22@RBMS3 | |short_description=p22@RBMS3 | ||
}} | }} |
Latest revision as of 22:00, 17 September 2015
Short description: | p22@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_RBMS3_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | 150bp_to_ENST00000473799_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.11e-27 | 3 |
tendon cell | 3.11e-27 | 3 |
gingival epithelial cell | 7.26e-08 | 3 |
synovial cell | 7.76e-08 | 3 |
stromal cell | 5.82e-07 | 28 |