FFCP PHASE1:Hg19::chr3:65535119..65535149,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9223 | |EntrezGene=9223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=946 | |HGNC=946 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000476403_5end | |association_with_transcript=25bp_to_ENST00000476403_5end | ||
|cluster_id=chr3:65535119..65535149,- | |||
|description=CAGE_peak_15_at_MAGI1_5end | |description=CAGE_peak_15_at_MAGI1_5end | ||
|id=chr3:65535119..65535149,- | |id=chr3:65535119..65535149,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.87e-07;2!CL:0000242;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.23e-14;1!UBERON:0010226;1.25e-13;1!UBERON:0004140;1.25e-13;1!UBERON:0005425;1.25e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;3.73e-14;1!DOID:154;1.87e-07;2!DOID:4236;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,3.50e-14,1;DOID:154,2.40e-07,2;DOID:4236,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.60e-24!115;UBERON:0001893!2.22e-14!34;UBERON:0001869!8.19e-14!32;UBERON:0002791!3.30e-13!33;UBERON:0002346!6.31e-13!90;UBERON:0003075!7.43e-13!86;UBERON:0007284!7.43e-13!86;UBERON:0002020!1.23e-12!34;UBERON:0003528!1.23e-12!34;UBERON:0001049!1.16e-11!57;UBERON:0005068!1.16e-11!57;UBERON:0006241!1.16e-11!57;UBERON:0007135!1.16e-11!57;UBERON:0002780!3.80e-11!41;UBERON:0001890!3.80e-11!41;UBERON:0006240!3.80e-11!41;UBERON:0002616!4.55e-11!59;UBERON:0003056!8.11e-11!61;UBERON:0003080!8.97e-11!42;UBERON:0000073!1.01e-10!94;UBERON:0001016!1.01e-10!94;UBERON:0000956!1.26e-10!25;UBERON:0000203!1.26e-10!25;UBERON:0000955!2.55e-10!69;UBERON:0006238!2.55e-10!69;UBERON:0005743!1.36e-09!86;UBERON:0001017!2.24e-09!82;UBERON:0002619!8.17e-09!22;UBERON:0000924!1.07e-08!173;UBERON:0006601!1.07e-08!173;UBERON:0004121!1.65e-08!169;UBERON:0000153!2.00e-08!129;UBERON:0007811!2.00e-08!129;UBERON:0001950!2.68e-08!20;UBERON:0000033!9.06e-08!123;UBERON:0006947!8.06e-07!3;UBERON:0004054!8.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.25e-13;1!UBERON:0002135;1.25e-13;1!UBERON:0000941;1.25e-13;1!UBERON:0001785;1.25e-13;1!UBERON:0002464;1.25e-13;1!UBERON:0004904;1.25e-13;1!UBERON:0001021;1.25e-13;1!UBERON:0002082;1.25e-13;1!UBERON:0003714;1.87e-07;2!UBERON:0005162;1.87e-07;2!UBERON:0000122;1.87e-07;2!UBERON:0002133;1.87e-07;2!UBERON:0000473;2.41e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,8.58e-14,1;UBERON:0000941,1.25e-13,1;UBERON:0001785,1.25e-13,1;UBERON:0002464,1.25e-13,1;UBERON:0004904,1.25e-13,1;UBERON:0001021,1.25e-13,1;UBERON:0003902,1.25e-13,1;UBERON:0005425,1.25e-13,1;UBERON:0002084,1.42e-13,1;UBERON:0002082,1.42e-13,1;UBERON:0010226,1.42e-13,1;UBERON:0002133,1.54e-07,2;UBERON:0003714,1.87e-07,2;UBERON:0005162,1.87e-07,2;UBERON:0000122,1.87e-07,2;UBERON:0000473,2.45e-07,8 | |||
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| ||
|short_description=p15@MAGI1 | |short_description=p15@MAGI1 | ||
}} | }} |
Latest revision as of 10:01, 19 September 2015
Short description: | p15@MAGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MAGI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000476403_5end |
EntrezGene: | MAGI1 |
HGNC: | 946 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 8.58e-14 | 1 |
cranial nerve II | 1.25e-13 | 1 |
cranial nerve | 1.25e-13 | 1 |
nerve trunk | 1.25e-13 | 1 |
nerve connecting eye with brain | 1.25e-13 | 1 |
nerve | 1.25e-13 | 1 |
retinal neural layer | 1.25e-13 | 1 |
presumptive neural retina | 1.25e-13 | 1 |
heart left ventricle | 1.42e-13 | 1 |
cardiac ventricle | 1.42e-13 | 1 |
future cardiac ventricle | 1.42e-13 | 1 |
atrioventricular valve | 1.54e-07 | 2 |
neural tissue | 1.87e-07 | 2 |
multi cell component structure | 1.87e-07 | 2 |
neuron projection bundle | 1.87e-07 | 2 |
testis | 2.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.50e-14 | 1 |
mixed cell type cancer | 2.40e-07 | 2 |
carcinosarcoma | 2.40e-07 | 2 |