FFCP PHASE1:Hg19::chr1:153958013..153958039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153958013..153958039,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr1:153958013..153958039,+ | |description=CAGE_peak_at_chr1:153958013..153958039,+ | ||
|id=chr1:153958013..153958039,+ | |id=chr1:153958013..153958039,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.31e-19!42;CL:0000860!4.96e-17!45;CL:0000034!7.24e-17!444;CL:0000723!2.11e-16!436;CL:0000048!2.19e-16!430;CL:0002371!1.23e-10!591;CL:0000557!1.60e-10!71;CL:0000144!2.47e-10!625;CL:0000839!2.71e-10!70;CL:0000766!2.95e-10!76;CL:0000055!1.61e-09!180;CL:0002194!2.26e-09!63;CL:0000576!2.26e-09!63;CL:0000040!2.26e-09!63;CL:0000559!2.26e-09!63;CL:0002009!3.02e-09!65;CL:0000393!2.26e-08!60;CL:0000211!2.26e-08!60;CL:0000134!2.80e-07!358;CL:0000219!3.23e-07!390;CL:0002320!4.94e-07!365;CL:0000012!6.07e-07!682;CL:0000548!8.49e-07!679;CL:0000004!8.49e-07!679;CL:0000255!8.49e-07!679 | |ontology_enrichment_celltype=CL:0002057!2.31e-19!42;CL:0000860!4.96e-17!45;CL:0000034!7.24e-17!444;CL:0000723!2.11e-16!436;CL:0000048!2.19e-16!430;CL:0002371!1.23e-10!591;CL:0000557!1.60e-10!71;CL:0000144!2.47e-10!625;CL:0000839!2.71e-10!70;CL:0000766!2.95e-10!76;CL:0000055!1.61e-09!180;CL:0002194!2.26e-09!63;CL:0000576!2.26e-09!63;CL:0000040!2.26e-09!63;CL:0000559!2.26e-09!63;CL:0002009!3.02e-09!65;CL:0000393!2.26e-08!60;CL:0000211!2.26e-08!60;CL:0000134!2.80e-07!358;CL:0000219!3.23e-07!390;CL:0002320!4.94e-07!365;CL:0000012!6.07e-07!682;CL:0000548!8.49e-07!679;CL:0000004!8.49e-07!679;CL:0000255!8.49e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.47e-41;33!CL:0002057;9.47e-41;33!CL:0000473;1.16e-29;39!CL:0000234;1.16e-29;39!CL:0000576;7.16e-22;48!CL:0000766;2.15e-15;69!CL:0000763;7.65e-08;100!CL:0002593;6.76e-07;2!CL:0002087;7.72e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.87e-41,42;CL:0002057,2.87e-41,42;CL:0000473,4.10e-38,48;CL:0000234,4.10e-38,48;CL:0000839,3.76e-32,66;CL:0000557,1.47e-31,67;CL:0002194,5.30e-29,59;CL:0000576,5.30e-29,59;CL:0000040,5.30e-29,59;CL:0000559,5.30e-29,59;CL:0000766,7.77e-29,72;CL:0002009,7.90e-28,61;CL:0000763,1.12e-16,108;CL:0000049,1.12e-16,108;CL:0002031,2.91e-14,120;CL:0002087,8.92e-14,115;CL:0000738,9.37e-14,136;CL:0000048,3.75e-11,427;CL:0000034,4.16e-11,441;CL:0000723,8.24e-11,433;CL:0000037,1.13e-09,168;CL:0000988,8.35e-09,177;CL:0002032,8.45e-09,161;CL:0000837,8.45e-09,161;CL:0000134,1.88e-07,354;CL:0002320,4.19e-07,361;CL:0002593,6.30e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-29;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.05e-12!167;UBERON:0002371!2.72e-11!80;UBERON:0001474!4.47e-10!86;UBERON:0003081!1.50e-08!216;UBERON:0004765!1.76e-08!101;UBERON:0001434!1.76e-08!101;UBERON:0002390!5.09e-08!102;UBERON:0003061!5.09e-08!102;UBERON:0002193!1.18e-07!112;UBERON:0004290!2.45e-07!70;UBERON:0001637!8.51e-07!42;UBERON:0003509!8.51e-07!42;UBERON:0004572!8.51e-07!42 | |ontology_enrichment_uberon=UBERON:0002204!1.05e-12!167;UBERON:0002371!2.72e-11!80;UBERON:0001474!4.47e-10!86;UBERON:0003081!1.50e-08!216;UBERON:0004765!1.76e-08!101;UBERON:0001434!1.76e-08!101;UBERON:0002390!5.09e-08!102;UBERON:0003061!5.09e-08!102;UBERON:0002193!1.18e-07!112;UBERON:0004290!2.45e-07!70;UBERON:0001637!8.51e-07!42;UBERON:0003509!8.51e-07!42;UBERON:0004572!8.51e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;6.76e-07;2!UBERON:0003513;9.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.58e-29,76;UBERON:0001474,2.80e-26,82;UBERON:0002390,7.27e-24,98;UBERON:0003061,7.27e-24,98;UBERON:0004765,3.08e-23,90;UBERON:0002405,3.11e-22,93;UBERON:0002193,7.05e-21,108;UBERON:0001434,4.00e-20,100;UBERON:0003081,5.76e-18,203;UBERON:0002204,6.44e-18,167;UBERON:0000926,6.86e-12,315;UBERON:0004120,6.86e-12,315;UBERON:0006603,6.86e-12,315;UBERON:0002456,6.30e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,2.41077811209591,2.19093027116212,0,0.123121058076788,0.612002073732759,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0.152826811495903,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,3.60980005446255,3.03815219002193,0,0,0,1.01778767145695,0.755751887377619,0.485168122375632,3.71886459049095,1.6446715520873,1.54853185447552,2.8769239232215,2.0492856522328,1.6553756092201,10.6871161028352,8.39130088658974,6.77132432971709,0.941211697713023,3.27487380069415,2.69668181334102,13.4676912643197,5.1348644332175,6.39337125799041,0.659702600373432,0.797854630486527,0.852449501065388,19.1538097494865,21.5606385382633,17.4390229718761,2.76373531782418,2.60741459210101,0.65156653411535,4.84319602106695,8.47038562771399,6.0127853613768,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36305137788922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.973269740605272,0.472674085820339,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0,1.58891016975863,0,0.354668382198357,0,0,0.24666754841716,0,0.538842688278752,0.326923806226917,0,0,0,1.5608003841516,0.570471821544449,0.448346041655403,0.352303495931295,0.647491777472526,1.12360645361799,0.204154171254893,0.491337269247072,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.45071417671979,0.340296549480063,0.358779271377724,0,0.423863802319124,0,0.412210116953756,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.757301322732344,0.184099797284599,0,0.355009592516614,0,0.169560592310488,0,0.272746120590835,0,0.487894824518382,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0.570762456703795,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,3.52457796419313,1.72943944100354,1.64115163454294,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,0.95339771567235,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0.256686072559497,0.508189248444927,1.30139853857622,2.31986643833309,0.335032530668698,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.473107245101804,0,0,0,0,0,0.553107505625109,1.04260337361699,0,0,0.413536052245775,1.07857100409308,1.17400313583789,0,0,0,0,0.153461973288062,0,0,0,0,0,0.925258162815933,0.710246901252508,0.410635780069046,0.519254429183621,0.581051892299796,0,0.40101294060657,0,0.114814448164607,0.728364672026868,0.262248829918848,0.451199612907412,0,0,0,0,0,0.340187410553031,0,1.54227252690289,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0.096670718292122,0.924291702687866,1.22802939780904,1.10269257987624,0.107420244868274,0.435050081742686,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0.715624433709956,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,1.01091240786658,0,0.421258456238981,0,1.46228093778771,2.11300293513511,0.272999822815972,0,0,1.10273068709225,0.66343897524122,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.7133421029625,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0.659215496907038,0,0.796991953004279,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0.421996129056054,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,2.1045278718029,0,0,0,0.941798755221676,1.19472429772959,0.569219092059585,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0.372757606696298,0,0.271808412147228,0.209205692624666,0.203996435272644,0,0.600420288709789,0,0,0.429765441419957,0,0.837847203816763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.962776056180637,0.83088067605837,0.2249738915515,0,0,0,0.07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| ||
|short_description=p@chr1:153958013..153958039,+ | |short_description=p@chr1:153958013..153958039,+ | ||
}} | }} |
Latest revision as of 21:55, 27 July 2015
Short description: | p@chr1:153958013..153958039, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153958013..153958039, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.87e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-41 | 42 |
defensive cell | 4.10e-38 | 48 |
phagocyte | 4.10e-38 | 48 |
myeloid lineage restricted progenitor cell | 3.76e-32 | 66 |
granulocyte monocyte progenitor cell | 1.47e-31 | 67 |
monopoietic cell | 5.30e-29 | 59 |
monocyte | 5.30e-29 | 59 |
monoblast | 5.30e-29 | 59 |
promonocyte | 5.30e-29 | 59 |
myeloid leukocyte | 7.77e-29 | 72 |
macrophage dendritic cell progenitor | 7.90e-28 | 61 |
myeloid cell | 1.12e-16 | 108 |
common myeloid progenitor | 1.12e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 2.91e-14 | 120 |
nongranular leukocyte | 8.92e-14 | 115 |
leukocyte | 9.37e-14 | 136 |
multi fate stem cell | 3.75e-11 | 427 |
stem cell | 4.16e-11 | 441 |
somatic stem cell | 8.24e-11 | 433 |
hematopoietic stem cell | 1.13e-09 | 168 |
hematopoietic cell | 8.35e-09 | 177 |
hematopoietic oligopotent progenitor cell | 8.45e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.45e-09 | 161 |
mesenchymal cell | 1.88e-07 | 354 |
connective tissue cell | 4.19e-07 | 361 |
smooth muscle cell of the internal thoracic artery | 6.30e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.58e-29 | 76 |
bone element | 2.80e-26 | 82 |
hematopoietic system | 7.27e-24 | 98 |
blood island | 7.27e-24 | 98 |
skeletal element | 3.08e-23 | 90 |
immune system | 3.11e-22 | 93 |
hemolymphoid system | 7.05e-21 | 108 |
skeletal system | 4.00e-20 | 100 |
lateral plate mesoderm | 5.76e-18 | 203 |
musculoskeletal system | 6.44e-18 | 167 |
mesoderm | 6.86e-12 | 315 |
mesoderm-derived structure | 6.86e-12 | 315 |
presumptive mesoderm | 6.86e-12 | 315 |
internal thoracic artery | 6.30e-07 | 2 |