FFCP PHASE1:Hg19::chr1:174128639..174128692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=Q5R372 | |UniProt=Q5R372 | ||
|association_with_transcript=0bp_to_ENST00000251507_5end | |association_with_transcript=0bp_to_ENST00000251507_5end | ||
|cluster_id=chr1:174128639..174128692,+ | |||
|description=CAGE_peak_1_at_RABGAP1L_5end | |description=CAGE_peak_1_at_RABGAP1L_5end | ||
|id=chr1:174128639..174128692,+ | |id=chr1:174128639..174128692,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.58e-29!172;CL:0000566!1.58e-29!172;CL:0000988!4.31e-27!182;CL:0002032!4.82e-27!165;CL:0000837!4.82e-27!165;CL:0000738!8.85e-25!140;CL:0002031!4.06e-19!124;CL:0002087!5.07e-18!119;CL:0000542!1.67e-17!53;CL:0000051!1.67e-17!53;CL:0000838!3.57e-17!52;CL:0000791!1.96e-11!18;CL:0000789!1.96e-11!18;CL:0002420!1.96e-11!18;CL:0002419!1.96e-11!18;CL:0000790!1.96e-11!18;CL:0000763!3.33e-11!112;CL:0000049!3.33e-11!112;CL:0000084!1.52e-10!25;CL:0000827!1.52e-10!25;CL:0000236!2.23e-08!14;CL:0000625!3.39e-08!11 | |ontology_enrichment_celltype=CL:0000037!1.58e-29!172;CL:0000566!1.58e-29!172;CL:0000988!4.31e-27!182;CL:0002032!4.82e-27!165;CL:0000837!4.82e-27!165;CL:0000738!8.85e-25!140;CL:0002031!4.06e-19!124;CL:0002087!5.07e-18!119;CL:0000542!1.67e-17!53;CL:0000051!1.67e-17!53;CL:0000838!3.57e-17!52;CL:0000791!1.96e-11!18;CL:0000789!1.96e-11!18;CL:0002420!1.96e-11!18;CL:0002419!1.96e-11!18;CL:0000790!1.96e-11!18;CL:0000763!3.33e-11!112;CL:0000049!3.33e-11!112;CL:0000084!1.52e-10!25;CL:0000827!1.52e-10!25;CL:0000236!2.23e-08!14;CL:0000625!3.39e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.86e-11;18!CL:0000789;1.86e-11;18!CL:0002419;1.86e-11;18!CL:0000542;3.82e-11;53!CL:0000084;1.34e-10;25!CL:0000625;3.28e-08;11!CL:0000236;6.18e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.44e-31,168;CL:0000988,3.75e-29,177;CL:0002032,1.51e-28,161;CL:0000837,1.51e-28,161;CL:0000738,2.26e-26,136;CL:0002031,1.46e-20,120;CL:0002087,1.91e-19,115;CL:0000542,1.69e-17,53;CL:0000051,1.69e-17,53;CL:0000838,3.62e-17,52;CL:0000763,2.92e-12,108;CL:0000049,2.92e-12,108;CL:0000791,1.96e-11,18;CL:0000789,1.96e-11,18;CL:0002420,1.96e-11,18;CL:0002419,1.96e-11,18;CL:0000790,1.96e-11,18;CL:0000084,1.53e-10,25;CL:0000827,1.53e-10,25;CL:0000236,2.23e-08,14;CL:0000625,3.39e-08,11;CL:0000766,9.47e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.86e-11;18!CL:0000051;3.82e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-11!115;UBERON:0002390!8.27e-10!102;UBERON:0003061!8.27e-10!102;UBERON:0002193!2.30e-09!112;UBERON:0000178!2.39e-07!15;UBERON:0000179!2.39e-07!15;UBERON:0000463!2.39e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!4.18e-11!115;UBERON:0002390!8.27e-10!102;UBERON:0003061!8.27e-10!102;UBERON:0002193!2.30e-09!112;UBERON:0000178!2.39e-07!15;UBERON:0000179!2.39e-07!15;UBERON:0000463!2.39e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-07;15!UBERON:0000179;2.25e-07;15!UBERON:0000463;2.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.40e-11,114;UBERON:0002390,7.86e-11,98;UBERON:0003061,7.86e-11,98;UBERON:0002193,2.71e-10,108;UBERON:0000178,2.39e-07,15;UBERON:0000179,2.39e-07,15;UBERON:0000463,2.39e-07,15 | |||
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| ||
|short_description=p1@RABGAP1L | |short_description=p1@RABGAP1L | ||
}} | }} |
Latest revision as of 18:42, 18 September 2015
Short description: | p1@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000251507_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | Q5R372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.44e-31 | 168 |
hematopoietic cell | 3.75e-29 | 177 |
hematopoietic oligopotent progenitor cell | 1.51e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-28 | 161 |
leukocyte | 2.26e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 1.46e-20 | 120 |
nongranular leukocyte | 1.91e-19 | 115 |
lymphocyte | 1.69e-17 | 53 |
common lymphoid progenitor | 1.69e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.62e-17 | 52 |
myeloid cell | 2.92e-12 | 108 |
common myeloid progenitor | 2.92e-12 | 108 |
mature alpha-beta T cell | 1.96e-11 | 18 |
alpha-beta T cell | 1.96e-11 | 18 |
immature T cell | 1.96e-11 | 18 |
mature T cell | 1.96e-11 | 18 |
immature alpha-beta T cell | 1.96e-11 | 18 |
T cell | 1.53e-10 | 25 |
pro-T cell | 1.53e-10 | 25 |
B cell | 2.23e-08 | 14 |
CD8-positive, alpha-beta T cell | 3.39e-08 | 11 |
myeloid leukocyte | 9.47e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.40e-11 | 114 |
hematopoietic system | 7.86e-11 | 98 |
blood island | 7.86e-11 | 98 |
hemolymphoid system | 2.71e-10 | 108 |
blood | 2.39e-07 | 15 |
haemolymphatic fluid | 2.39e-07 | 15 |
organism substance | 2.39e-07 | 15 |