FFCP PHASE1:Hg19::chr1:178063231..178063261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9462 | |EntrezGene=9462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9874 | |HGNC=9874 | ||
|TSSclassifier=strong | |||
|UniProt=F8W755 | |UniProt=F8W755 | ||
|association_with_transcript=-14bp_to_ENST00000367649_5end | |association_with_transcript=-14bp_to_ENST00000367649_5end | ||
|cluster_id=chr1:178063231..178063261,+ | |||
|description=CAGE_peak_1_at_RASAL2_5end | |description=CAGE_peak_1_at_RASAL2_5end | ||
|id=chr1:178063231..178063261,+ | |id=chr1:178063231..178063261,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.00e-11!180;CL:0000220!2.42e-10!246;CL:0002321!2.97e-10!248;CL:0000057!1.44e-08!75;CL:0000222!2.74e-07!119 | |ontology_enrichment_celltype=CL:0000055!7.00e-11!180;CL:0000220!2.42e-10!246;CL:0002321!2.97e-10!248;CL:0000057!1.44e-08!75;CL:0000222!2.74e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.72e-09,250;CL:0000057,6.92e-09,76;CL:0000222,5.36e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.85e-18!659;UBERON:0000467!1.28e-16!625;UBERON:0000480!2.44e-16!626;UBERON:0000062!2.56e-12!511;UBERON:0002050!9.96e-11!605;UBERON:0005423!9.96e-11!605;UBERON:0000922!1.31e-10!612;UBERON:0000923!1.76e-10!604;UBERON:0005291!1.76e-10!604;UBERON:0006598!1.76e-10!604;UBERON:0002532!1.76e-10!604;UBERON:0000119!6.30e-10!312;UBERON:0000483!7.74e-10!309;UBERON:0000475!9.43e-10!365;UBERON:0000481!1.41e-07!347;UBERON:0000477!2.47e-07!286;UBERON:0002100!2.56e-07!216;UBERON:0004872!2.97e-07!84;UBERON:0004111!5.52e-07!241;UBERON:0002049!9.90e-07!79;UBERON:0007798!9.90e-07!79 | |ontology_enrichment_uberon=UBERON:0000468!4.85e-18!659;UBERON:0000467!1.28e-16!625;UBERON:0000480!2.44e-16!626;UBERON:0000062!2.56e-12!511;UBERON:0002050!9.96e-11!605;UBERON:0005423!9.96e-11!605;UBERON:0000922!1.31e-10!612;UBERON:0000923!1.76e-10!604;UBERON:0005291!1.76e-10!604;UBERON:0006598!1.76e-10!604;UBERON:0002532!1.76e-10!604;UBERON:0000119!6.30e-10!312;UBERON:0000483!7.74e-10!309;UBERON:0000475!9.43e-10!365;UBERON:0000481!1.41e-07!347;UBERON:0000477!2.47e-07!286;UBERON:0002100!2.56e-07!216;UBERON:0004872!2.97e-07!84;UBERON:0004111!5.52e-07!241;UBERON:0002049!9.90e-07!79;UBERON:0007798!9.90e-07!79 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,6.77e-10,592;UBERON:0005423,6.84e-10,581;UBERON:0002050,7.69e-10,564;UBERON:0000119,2.85e-09,309;UBERON:0000483,3.49e-09,306;UBERON:0000923,4.09e-09,560;UBERON:0010316,4.09e-09,560;UBERON:0005291,4.09e-09,560;UBERON:0006598,4.09e-09,560;UBERON:0010317,4.09e-09,560;UBERON:0002532,4.09e-09,560;UBERON:0004923,1.51e-07,66;UBERON:0004872,6.32e-07,83 | |||
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| ||
|short_description=p1@RASAL2 | |short_description=p1@RASAL2 | ||
}} | }} |
Latest revision as of 21:17, 18 September 2015
Short description: | p1@RASAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000367649_5end |
EntrezGene: | RASAL2 |
HGNC: | 9874 |
UniProt: | F8W755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.72e-09 | 250 |
fibroblast | 6.92e-09 | 76 |
mesodermal cell | 5.36e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
embryo | 6.77e-10 | 592 |
developing anatomical structure | 6.84e-10 | 581 |
embryonic structure | 7.69e-10 | 564 |
cell layer | 2.85e-09 | 309 |
epithelium | 3.49e-09 | 306 |
germ layer | 4.09e-09 | 560 |
germ layer / neural crest | 4.09e-09 | 560 |
embryonic tissue | 4.09e-09 | 560 |
presumptive structure | 4.09e-09 | 560 |
germ layer / neural crest derived structure | 4.09e-09 | 560 |
epiblast (generic) | 4.09e-09 | 560 |
organ component layer | 1.51e-07 | 66 |
splanchnic layer of lateral plate mesoderm | 6.32e-07 | 83 |