FFCP PHASE1:Hg19::chr1:234764998..234765012,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100302691 | |EntrezGene=100302691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37192 | |HGNC=37192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000429269,NR_033927_5end | |association_with_transcript=-44bp_to_ENST00000429269,NR_033927_5end | ||
|cluster_id=chr1:234764998..234765012,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_3_at_LINC00184_5end | |description=CAGE_peak_3_at_LINC00184_5end | ||
|id=chr1:234764998..234765012,+ | |id=chr1:234764998..234765012,+ | ||
|ontology_enrichment_celltype=CL:0000080!7.63e-10!6;CL:0000319!5.78e-07!1;CL:0002568!8.67e-07!1 | |ontology_enrichment_celltype=CL:0000080!7.63e-10!6;CL:0000319!5.78e-07!1;CL:0002568!8.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.58e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.58e-07,25;CL:0000827,2.58e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!1.75e-07!1;DOID:0060061!1.75e-07!1;DOID:8691!1.75e-07!1;DOID:5662!3.40e-07!1;DOID:630!3.82e-07!1;DOID:0050177!3.82e-07!1;DOID:0050427!3.82e-07!1;DOID:3030!5.78e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.21e-40;1!DOID:0060061;2.21e-40;1!DOID:8691;2.21e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.21e-40,1;DOID:0060061,2.21e-40,1;DOID:8691,2.21e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!8.76e-10!10;UBERON:0000358!8.76e-10!10;UBERON:0000307!8.76e-10!10;UBERON:0000091!8.76e-10!10;UBERON:0000087!8.76e-10!10;UBERON:0007806!8.76e-10!10;UBERON:0008780!8.76e-10!10;UBERON:0005728!8.76e-10!10;UBERON:0005418!2.23e-07!1;UBERON:0001389!2.23e-07!1;UBERON:0000026!2.23e-07!1;UBERON:0008784!2.23e-07!1;UBERON:0006058!2.23e-07!1;UBERON:0003663!2.23e-07!1;UBERON:0001383!2.23e-07!1;UBERON:0004256!2.23e-07!1;UBERON:0002529!2.23e-07!1;UBERON:0004708!2.23e-07!1;UBERON:0002101!2.23e-07!1;UBERON:0004709!2.23e-07!1;UBERON:0003661!2.23e-07!1;UBERON:0002471!2.23e-07!1;UBERON:0004357!2.23e-07!1;UBERON:0009872!2.23e-07!1;UBERON:0004347!2.23e-07!1;UBERON:0005420!2.23e-07!1;UBERON:0005732!2.23e-07!1;UBERON:0006057!2.23e-07!1;UBERON:0000978!2.23e-07!1;UBERON:0002103!2.23e-07!1;UBERON:0001665!2.23e-07!1;UBERON:0003823!2.23e-07!1;UBERON:0000154!2.23e-07!1;UBERON:0005733!2.23e-07!1;UBERON:0005730!2.23e-07!1;UBERON:0002146!6.12e-07!1;UBERON:0005623!6.12e-07!1 | |ontology_enrichment_uberon=UBERON:0002331!8.76e-10!10;UBERON:0000358!8.76e-10!10;UBERON:0000307!8.76e-10!10;UBERON:0000091!8.76e-10!10;UBERON:0000087!8.76e-10!10;UBERON:0007806!8.76e-10!10;UBERON:0008780!8.76e-10!10;UBERON:0005728!8.76e-10!10;UBERON:0005418!2.23e-07!1;UBERON:0001389!2.23e-07!1;UBERON:0000026!2.23e-07!1;UBERON:0008784!2.23e-07!1;UBERON:0006058!2.23e-07!1;UBERON:0003663!2.23e-07!1;UBERON:0001383!2.23e-07!1;UBERON:0004256!2.23e-07!1;UBERON:0002529!2.23e-07!1;UBERON:0004708!2.23e-07!1;UBERON:0002101!2.23e-07!1;UBERON:0004709!2.23e-07!1;UBERON:0003661!2.23e-07!1;UBERON:0002471!2.23e-07!1;UBERON:0004357!2.23e-07!1;UBERON:0009872!2.23e-07!1;UBERON:0004347!2.23e-07!1;UBERON:0005420!2.23e-07!1;UBERON:0005732!2.23e-07!1;UBERON:0006057!2.23e-07!1;UBERON:0000978!2.23e-07!1;UBERON:0002103!2.23e-07!1;UBERON:0001665!2.23e-07!1;UBERON:0003823!2.23e-07!1;UBERON:0000154!2.23e-07!1;UBERON:0005733!2.23e-07!1;UBERON:0005730!2.23e-07!1;UBERON:0002146!6.12e-07!1;UBERON:0005623!6.12e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.40e-36;10!UBERON:0000178;1.40e-24;15!UBERON:0000179;1.40e-24;15!UBERON:0000463;1.40e-24;15!UBERON:0000478;1.02e-15;24!UBERON:0002390;4.18e-12;32!UBERON:0000922;5.90e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.40e-36,10;UBERON:0000358,2.40e-36,10;UBERON:0000307,2.40e-36,10;UBERON:0000091,2.40e-36,10;UBERON:0000087,2.40e-36,10;UBERON:0007010,2.40e-36,10;UBERON:0007806,2.40e-36,10;UBERON:0008780,2.40e-36,10;UBERON:0005728,2.40e-36,10;UBERON:0000178,1.40e-24,15;UBERON:0000179,1.40e-24,15;UBERON:0000463,1.40e-24,15;UBERON:0000478,1.02e-15,24 | |||
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|short_description=p3@LINC00184 | |short_description=p3@LINC00184 | ||
}} | }} |
Latest revision as of 10:56, 16 September 2015
Short description: | p3@LINC00184 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LINC00184_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -44bp_to_ENST00000429269, NR_033927_5end |
EntrezGene: | LINC00184 |
HGNC: | 37192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.58e-07 | 25 |
pro-T cell | 2.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.40e-36 | 10 |
blastocyst | 2.40e-36 | 10 |
blastula | 2.40e-36 | 10 |
bilaminar disc | 2.40e-36 | 10 |
inner cell mass | 2.40e-36 | 10 |
cleaving embryo | 2.40e-36 | 10 |
connecting stalk | 2.40e-36 | 10 |
inner cell mass derived epiblast | 2.40e-36 | 10 |
extraembryonic mesoderm | 2.40e-36 | 10 |
blood | 1.40e-24 | 15 |
haemolymphatic fluid | 1.40e-24 | 15 |
organism substance | 1.40e-24 | 15 |
extraembryonic structure | 1.02e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.21e-40 | 1 |
cutaneous T cell lymphoma | 2.21e-40 | 1 |
mycosis fungoides | 2.21e-40 | 1 |