FFCP PHASE1:Hg19::chr5:172748017..172748023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:172748017..172748023,- | |||
|description=CAGE_peak_at_chr5:172748017..172748023,- | |description=CAGE_peak_at_chr5:172748017..172748023,- | ||
|id=chr5:172748017..172748023,- | |id=chr5:172748017..172748023,- | ||
|ontology_enrichment_celltype=CL:0000066!2.25e-07!254;CL:0000548!2.29e-07!679;CL:0000004!2.29e-07!679;CL:0000255!2.29e-07!679;CL:0000012!4.17e-07!682 | |ontology_enrichment_celltype=CL:0000066!2.25e-07!254;CL:0000548!2.29e-07!679;CL:0000004!2.29e-07!679;CL:0000255!2.29e-07!679;CL:0000012!4.17e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000515;6.85e-09;3!CL:1000306;3.73e-07;4!CL:0002547;3.73e-07;4!CL:0002174;4.33e-07;1!CL:0000501;4.33e-07;1!CL:0000056;7.20e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.21e-07,4;CL:0002547,3.21e-07,4;CL:0002174,4.08e-07,1;CL:0000501,4.08e-07,1;CL:0000515,7.20e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.33e-07;1!UBERON:0003852;4.33e-07;1!CL:0000515;7.20e-07;4 | |||
|ontology_enrichment_disease=DOID:0050687!4.96e-21!143;DOID:162!1.25e-17!235;DOID:14566!1.31e-16!239;DOID:305!8.77e-16!106;DOID:7!8.05e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:154;6.69e-13;2!DOID:4236;6.69e-13;2!DOID:3112;9.89e-08;1!DOID:4960;4.33e-07;1!DOID:0070004;4.33e-07;1!DOID:3571;4.33e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:154,7.13e-13,2;DOID:4236,7.13e-13,2;DOID:3112,9.91e-08,1;DOID:3571,3.62e-07,1;DOID:4960,6.97e-07,1;DOID:0070004,6.97e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;4.02e-08;7!UBERON:0009142;4.02e-08;7!UBERON:0004797;3.73e-07;4!UBERON:0000415;3.73e-07;4!UBERON:0007240;3.73e-07;4!UBERON:0005742;3.73e-07;4!UBERON:0005734;3.73e-07;4!UBERON:0004664;3.73e-07;4!UBERON:0004663;3.73e-07;4!UBERON:0005705;4.33e-07;1!UBERON:0008193;4.33e-07;1!UBERON:0010912;4.33e-07;1!UBERON:0002514;4.33e-07;1!UBERON:0003457;4.33e-07;1!UBERON:0008907;4.33e-07;1!UBERON:0008001;4.33e-07;1!UBERON:0007213;4.33e-07;1!UBERON:0009891;4.33e-07;1!UBERON:0007914;4.33e-07;1!UBERON:0007375;4.33e-07;1!UBERON:0003323;4.33e-07;1!UBERON:0010258;4.33e-07;1!UBERON:0005253;4.33e-07;1!UBERON:0007842;4.33e-07;1!UBERON:0002397;4.33e-07;1!UBERON:0003113;4.33e-07;1!UBERON:0003277;4.33e-07;1!UBERON:0001709;4.33e-07;1!UBERON:0002244;4.33e-07;1!UBERON:0005620;4.33e-07;1!UBERON:0010364;4.33e-07;1!UBERON:0004288;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.21e-07,4;UBERON:0007240,3.21e-07,4;UBERON:0005742,3.21e-07,4;UBERON:0005734,3.21e-07,4;UBERON:0004664,3.21e-07,4;UBERON:0004663,3.21e-07,4;UBERON:0005705,6.20e-07,1;UBERON:0008193,6.20e-07,1;UBERON:0010912,6.20e-07,1;UBERON:0002514,6.20e-07,1;UBERON:0003457,6.20e-07,1;UBERON:0008907,6.20e-07,1;UBERON:0008001,6.20e-07,1;UBERON:0007213,6.20e-07,1;UBERON:0009891,6.20e-07,1;UBERON:0007914,6.20e-07,1;UBERON:0009292,6.20e-07,1;UBERON:0003099,6.20e-07,1;UBERON:0007375,6.20e-07,1;UBERON:0003323,6.20e-07,1;UBERON:0010258,6.20e-07,1;UBERON:0007842,6.20e-07,1;UBERON:0009494,6.20e-07,1;UBERON:0010042,6.20e-07,1;UBERON:0010045,6.20e-07,1;UBERON:0010259,6.20e-07,1;UBERON:0010359,6.20e-07,1;UBERON:0009526,6.20e-07,1;UBERON:0002397,6.20e-07,1;UBERON:0003113,6.20e-07,1;UBERON:0003277,6.20e-07,1;UBERON:0001709,6.20e-07,1;UBERON:0004066,6.20e-07,1;UBERON:0002244,6.20e-07,1;UBERON:0005620,6.20e-07,1;UBERON:0004362,6.20e-07,1;UBERON:0010364,6.20e-07,1;UBERON:0010046,6.20e-07,1;UBERON:0005868,6.20e-07,1;UBERON:0007238,6.20e-07,1;UBERON:0004288,6.20e-07,1;UBERON:0004068,6.20e-07,1;UBERON:0010334,6.20e-07,1;UBERON:0003852,6.20e-07,1;UBERON:0010253,6.20e-07,1 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.886413581652058,3.31022952033047,2.86836620748814,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0.323745888736263,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.919463387397059,0.150238058906597,0.113432183160021,1.25572744982203,0,0.423863802319124,0,0,3.09168648054755,0.18611685633159,0.506328996723799,0.292311015483596,2.52433774244115,0.460249493211497,0,1.77504796258307,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,1.67737398844108,2.29723871668228,0,1.44781306667579,2.05476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,3.32112799267718,0,0.695068915744663,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.841980283299221,0,0,2.2519548960105,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0.460404944679482,0.68888668898764,1.63882051206045,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0.576570202095319,0.510450849978337,0.50578890427775,0,2.83331112147576,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.989838023675989,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0.511343412510774,0,0.933118762985422,0,2.86433879480975,0,0,0,0,0,0,0,1.30213880542617,0.174919999992391,0,0.341380344856499,0,0.236387681767936,0,0,1.21537496453305,0,0,0,0,0,0,0.21787692703798,0.41827123283581,0,0.797594390929008,0.23056390438806,0.897576444097721,0.54323685961004,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0.300646838828985,0,0.664653872707185,0,0,0,0.284609546029793,0,0.173559738335131,0.391969589657511,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.730893170861856,0.328461828212837,0,0.264768380074501,0,0.411125773940253,0.794858446811959,0,0.391102765469606,0.240476460754601,0,0.19980960958213,0.288180834308212,0.229073192331831,2.4023299700675,0,0.124252535565433,0,0,0,0.305994652908965,0,0,0,0,1.28929632425987,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,1.44119953416961,0,0.315132729228895,0.329663433524666,0.404421263125109,0.196854963029498,0.0846733320657845,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0.104909176269996,0.633602019116439,0.717149357331379,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,1.0062716070103,0,0.228840068396924,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0,0,0.181848659202559,0.429642228169954,0,0.796191777397232,2.00013882331577,0.686791410365586,0.673498977531838,0,0,0.428883182749851,0.260994291965212,0.453411851024545,0.231522474323834,1.46842022703881,0,0,0.438568099157414,0,0.192914038270915,0.168942440653073,0.512483037175893,0.690860683462397,0,0.138258436151731,0,0,0,2.6208787907713,0,0,0,0.106691729694141,1.03328987796489,0.567515953566836,0.184105950251841,0,0,0,0.107824811396682,0.471797825567689,0,0,0,0.247871528518004,0,0,0,0,1.05802783107205,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0.924205329202706,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0.785720083444267,4.9131575253029,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0.336283722218824,0,0,0,0,0,0,0,0.354581522651905,0.556157009460346,0,0,0.840816489941367,0,0,2.38875843943525,0,0,0,0.86929136151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| ||
|short_description=p@chr5:172748017..172748023,- | |short_description=p@chr5:172748017..172748023,- | ||
}} | }} |
Latest revision as of 13:16, 30 July 2015
Short description: | p@chr5:172748017..172748023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:172748017..172748023, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.21e-07 | 4 |
fibroblast of the aortic adventitia | 3.21e-07 | 4 |
follicular cell of ovary | 4.08e-07 | 1 |
granulosa cell | 4.08e-07 | 1 |
skeletal muscle myoblast | 7.20e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 7.13e-13 | 2 |
carcinosarcoma | 7.13e-13 | 2 |
papillary adenocarcinoma | 9.91e-08 | 1 |
liver cancer | 3.62e-07 | 1 |
bone marrow cancer | 6.97e-07 | 1 |
myeloma | 6.97e-07 | 1 |